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Fluorine in PDB 6tev: The Structure of CYP121 in Complex with Inhibitor L44

Enzymatic activity of The Structure of CYP121 in Complex with Inhibitor L44

All present enzymatic activity of The Structure of CYP121 in Complex with Inhibitor L44:
1.14.19.70;

Protein crystallography data

The structure of The Structure of CYP121 in Complex with Inhibitor L44, PDB code: 6tev was solved by S.Adam, J.Koehnke, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.53 / 1.70
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 77.555, 77.555, 264.188, 90, 90, 120
R / Rfree (%) 17.1 / 18.9

Other elements in 6tev:

The structure of The Structure of CYP121 in Complex with Inhibitor L44 also contains other interesting chemical elements:

Iron (Fe) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the The Structure of CYP121 in Complex with Inhibitor L44 (pdb code 6tev). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 6 binding sites of Fluorine where determined in the The Structure of CYP121 in Complex with Inhibitor L44, PDB code: 6tev:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6;

Fluorine binding site 1 out of 6 in 6tev

Go back to Fluorine Binding Sites List in 6tev
Fluorine binding site 1 out of 6 in the The Structure of CYP121 in Complex with Inhibitor L44


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of The Structure of CYP121 in Complex with Inhibitor L44 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F901

b:78.6
occ:1.00
F01 A:N5W901 0.0 78.6 1.0
C02 A:N5W901 1.4 81.3 1.0
F03 A:N5W901 2.2 84.3 1.0
F04 A:N5W901 2.2 86.9 1.0
H191 A:N5W902 2.3 54.4 1.0
C05 A:N5W901 2.4 73.8 1.0
HMD A:HEM905 3.0 20.6 1.0
C19 A:N5W902 3.1 45.3 1.0
H061 A:N5W901 3.1 85.1 1.0
HAD A:HEM905 3.1 22.7 1.0
C06 A:N5W901 3.1 70.9 1.0
H132 A:N5W902 3.3 59.2 1.0
C22 A:N5W901 3.3 68.1 1.0
HMDB A:HEM905 3.4 20.6 1.0
H221 A:N5W901 3.4 81.8 1.0
HB A:THR229 3.4 20.9 1.0
H181 A:N5W902 3.5 54.4 1.0
CMD A:HEM905 3.6 17.1 1.0
HB3 A:ASN85 3.8 42.0 1.0
CAD A:HEM905 3.8 18.9 1.0
C12 A:N5W902 3.8 49.1 1.0
H201 A:N5W902 3.8 49.0 1.0
C20 A:N5W902 3.9 40.8 1.0
HADA A:HEM905 3.9 22.7 1.0
C13 A:N5W902 3.9 49.3 1.0
C18 A:N5W902 4.1 45.3 1.0
C2D A:HEM905 4.3 15.2 1.0
C07 A:N5W901 4.3 67.5 1.0
C3D A:HEM905 4.3 16.3 1.0
CB A:THR229 4.3 17.4 1.0
N14 A:N5W902 4.3 45.8 1.0
HB2 A:ALA233 4.4 18.0 1.0
HMDA A:HEM905 4.5 20.6 1.0
C21 A:N5W901 4.5 64.9 1.0
HG21 A:THR229 4.5 21.1 1.0
CB A:ASN85 4.6 34.9 1.0
OD1 A:ASN85 4.7 46.8 1.0
HG2 A:MET86 4.7 49.4 1.0
HB2 A:ASN85 4.7 42.0 1.0
O2D A:HEM905 4.7 27.4 1.0
H131 A:N5W902 4.8 59.2 1.0
OG1 A:THR229 4.8 20.5 1.0
CG2 A:THR229 4.8 17.5 1.0
HG22 A:THR229 4.8 21.1 1.0
C08 A:N5W901 4.9 65.1 1.0
H071 A:N5W901 5.0 81.0 1.0

Fluorine binding site 2 out of 6 in 6tev

Go back to Fluorine Binding Sites List in 6tev
Fluorine binding site 2 out of 6 in the The Structure of CYP121 in Complex with Inhibitor L44


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of The Structure of CYP121 in Complex with Inhibitor L44 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F901

b:84.3
occ:1.00
F03 A:N5W901 0.0 84.3 1.0
C02 A:N5W901 1.4 81.3 1.0
HB3 A:ASN85 2.2 42.0 1.0
F01 A:N5W901 2.2 78.6 1.0
F04 A:N5W901 2.3 86.9 1.0
C05 A:N5W901 2.3 73.8 1.0
H061 A:N5W901 2.4 85.1 1.0
C06 A:N5W901 2.7 70.9 1.0
HAD A:HEM905 3.1 22.7 1.0
CB A:ASN85 3.1 34.9 1.0
H A:ASN85 3.3 34.3 1.0
H A:MET86 3.3 40.6 1.0
O A:HOH1201 3.4 28.9 1.0
HB2 A:ASN85 3.4 42.0 1.0
HG2 A:MET86 3.4 49.4 1.0
O2D A:HEM905 3.6 27.4 1.0
C22 A:N5W901 3.6 68.1 1.0
HMD A:HEM905 3.7 20.6 1.0
O A:VAL82 3.9 31.4 1.0
N A:ASN85 3.9 28.6 1.0
H221 A:N5W901 3.9 81.8 1.0
N A:MET86 3.9 33.8 1.0
OD1 A:ASN85 4.0 46.8 1.0
CA A:ASN85 4.0 31.8 1.0
CAD A:HEM905 4.0 18.9 1.0
CG A:ASN85 4.0 39.6 1.0
C07 A:N5W901 4.0 67.5 1.0
HADA A:HEM905 4.1 22.7 1.0
O A:VAL83 4.3 33.5 1.0
CG A:MET86 4.3 41.2 1.0
C A:ASN85 4.4 31.2 1.0
CGD A:HEM905 4.4 24.5 1.0
H132 A:N5W902 4.4 59.2 1.0
H191 A:N5W902 4.5 54.4 1.0
HB2 A:MET86 4.6 47.9 1.0
H071 A:N5W901 4.6 81.0 1.0
HG3 A:MET86 4.6 49.4 1.0
CMD A:HEM905 4.6 17.1 1.0
C21 A:N5W901 4.7 64.9 1.0
HMDB A:HEM905 4.7 20.6 1.0
H181 A:N5W902 4.7 54.4 1.0
CBD A:HEM905 4.7 21.0 1.0
HB A:THR229 4.8 20.9 1.0
HA A:VAL83 4.8 29.9 1.0
C A:VAL83 4.8 29.1 1.0
HG12 A:VAL82 4.8 35.1 1.0
HA A:ASN85 4.8 38.2 1.0
CB A:MET86 4.8 39.9 1.0
C08 A:N5W901 4.9 65.1 1.0
CA A:MET86 4.9 37.6 1.0
HBDA A:HEM905 4.9 25.2 1.0
C A:ASN84 5.0 29.3 1.0

Fluorine binding site 3 out of 6 in 6tev

Go back to Fluorine Binding Sites List in 6tev
Fluorine binding site 3 out of 6 in the The Structure of CYP121 in Complex with Inhibitor L44


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of The Structure of CYP121 in Complex with Inhibitor L44 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F901

b:86.9
occ:1.00
F04 A:N5W901 0.0 86.9 1.0
C02 A:N5W901 1.4 81.3 1.0
F01 A:N5W901 2.2 78.6 1.0
F03 A:N5W901 2.3 84.3 1.0
C05 A:N5W901 2.4 73.8 1.0
H221 A:N5W901 2.5 81.8 1.0
HB3 A:ASN85 2.5 42.0 1.0
HB2 A:ASN85 2.8 42.0 1.0
C22 A:N5W901 2.8 68.1 1.0
HG21 A:THR229 2.9 21.1 1.0
CB A:ASN85 3.0 34.9 1.0
HG12 A:VAL82 3.0 35.1 1.0
HB A:THR229 3.2 20.9 1.0
O A:VAL82 3.2 31.4 1.0
HG13 A:VAL82 3.5 35.1 1.0
CG2 A:THR229 3.6 17.5 1.0
CG A:ASN85 3.6 39.6 1.0
C06 A:N5W901 3.6 70.9 1.0
CG1 A:VAL82 3.7 29.3 1.0
OD1 A:ASN85 3.7 46.8 1.0
HG22 A:THR229 3.7 21.1 1.0
CB A:THR229 3.8 17.4 1.0
H191 A:N5W902 3.8 54.4 1.0
H061 A:N5W901 3.9 85.1 1.0
H A:ASN85 3.9 34.3 1.0
HG11 A:VAL82 4.1 35.1 1.0
C19 A:N5W902 4.1 45.3 1.0
C21 A:N5W901 4.2 64.9 1.0
OG1 A:THR229 4.2 20.5 1.0
H201 A:N5W902 4.3 49.0 1.0
C A:VAL82 4.3 27.5 1.0
CA A:ASN85 4.4 31.8 1.0
C20 A:N5W902 4.4 40.8 1.0
HG23 A:THR229 4.4 21.1 1.0
N A:ASN85 4.5 28.6 1.0
ND2 A:ASN85 4.6 35.0 1.0
H132 A:N5W902 4.6 59.2 1.0
HMD A:HEM905 4.6 20.6 1.0
HA A:VAL83 4.7 29.9 1.0
H211 A:N5W901 4.7 77.9 1.0
C07 A:N5W901 4.8 67.5 1.0
HD22 A:ASN85 4.8 42.1 1.0
HAD A:HEM905 4.8 22.7 1.0
HG1 A:THR229 4.8 24.6 1.0
C12 A:N5W902 4.8 49.1 1.0
HA A:ASN85 5.0 38.2 1.0
CB A:VAL82 5.0 26.5 1.0
C08 A:N5W901 5.0 65.1 1.0
H A:MET86 5.0 40.6 1.0

Fluorine binding site 4 out of 6 in 6tev

Go back to Fluorine Binding Sites List in 6tev
Fluorine binding site 4 out of 6 in the The Structure of CYP121 in Complex with Inhibitor L44


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of The Structure of CYP121 in Complex with Inhibitor L44 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F902

b:69.1
occ:1.00
F01 A:N5W902 0.0 69.1 1.0
C02 A:N5W902 1.4 63.9 1.0
F04 A:N5W902 2.2 69.4 1.0
F03 A:N5W902 2.2 66.6 1.0
H061 A:N5W902 2.4 40.2 1.0
C05 A:N5W902 2.4 45.6 1.0
O A:HOH1063 2.4 22.3 1.0
HB2 A:ALA167 2.6 22.3 1.0
C06 A:N5W902 2.7 33.5 1.0
HB1 A:ALA167 3.0 22.3 1.0
CB A:ALA167 3.2 18.6 1.0
HB3 A:SER163 3.3 22.6 1.0
O A:HOH1028 3.3 27.9 1.0
HE3 A:TRP182 3.4 20.6 1.0
HA A:TRP182 3.5 21.4 1.0
C22 A:N5W902 3.6 38.2 1.0
HB3 A:ALA167 3.7 22.3 1.0
OD2 A:ASP185 3.8 19.4 1.0
HB3 A:ASN181 3.9 21.0 1.0
H221 A:N5W902 4.0 45.9 1.0
HB2 A:TRP182 4.0 20.7 1.0
O A:HOH1149 4.0 21.2 1.0
C07 A:N5W902 4.1 25.8 1.0
HB2 A:SER163 4.1 22.6 1.0
CB A:SER163 4.1 18.8 1.0
HB2 A:ASN181 4.2 21.0 1.0
CA A:TRP182 4.2 17.8 1.0
N A:TRP182 4.3 18.0 1.0
CE3 A:TRP182 4.3 17.1 1.0
HD23 A:LEU164 4.3 26.3 1.0
HA A:ALA167 4.3 19.4 1.0
CA A:ALA167 4.4 16.1 1.0
HG A:SER163 4.4 22.8 1.0
H A:TRP182 4.5 21.6 1.0
HG13 A:VAL228 4.5 22.0 1.0
CB A:ASN181 4.5 17.4 1.0
C A:ASN181 4.5 18.5 1.0
HG11 A:VAL228 4.5 22.0 1.0
HB2 A:ASP185 4.6 22.6 1.0
H071 A:N5W902 4.6 31.0 1.0
CB A:TRP182 4.6 17.2 1.0
O A:HOH1262 4.6 24.9 1.0
O A:ASN181 4.7 18.0 1.0
HG12 A:VAL228 4.7 22.0 1.0
C21 A:N5W902 4.8 30.8 1.0
O A:HOH1129 4.8 22.7 1.0
OG A:SER163 4.8 19.0 1.0
CG1 A:VAL228 4.8 18.3 1.0
O A:SER163 4.8 18.9 1.0
O A:ALA178 4.9 15.4 1.0
HZ3 A:TRP182 4.9 23.7 1.0
CG A:ASP185 4.9 19.7 1.0
H A:ALA167 4.9 19.8 1.0
C08 A:N5W902 4.9 28.7 1.0

Fluorine binding site 5 out of 6 in 6tev

Go back to Fluorine Binding Sites List in 6tev
Fluorine binding site 5 out of 6 in the The Structure of CYP121 in Complex with Inhibitor L44


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of The Structure of CYP121 in Complex with Inhibitor L44 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F902

b:66.6
occ:1.00
F03 A:N5W902 0.0 66.6 1.0
C02 A:N5W902 1.4 63.9 1.0
F01 A:N5W902 2.2 69.1 1.0
F04 A:N5W902 2.2 69.4 1.0
C05 A:N5W902 2.3 45.6 1.0
O A:HOH1262 2.5 24.9 1.0
H221 A:N5W902 2.6 45.9 1.0
C22 A:N5W902 2.8 38.2 1.0
O A:HOH1129 2.9 22.7 1.0
HD23 A:LEU164 3.1 26.3 1.0
OD2 A:ASP185 3.3 19.4 1.0
HB2 A:SER163 3.3 22.6 1.0
HD21 A:LEU164 3.3 26.3 1.0
HB3 A:SER163 3.4 22.6 1.0
HG13 A:VAL228 3.5 22.0 1.0
C06 A:N5W902 3.5 33.5 1.0
CD2 A:LEU164 3.6 21.9 1.0
HB2 A:ALA167 3.7 22.3 1.0
H061 A:N5W902 3.8 40.2 1.0
CB A:SER163 3.8 18.8 1.0
HD22 A:LEU164 3.9 26.3 1.0
HB1 A:ALA167 4.0 22.3 1.0
HG12 A:VAL228 4.0 22.0 1.0
HG A:SER163 4.1 22.8 1.0
HB3 A:ALA167 4.1 22.3 1.0
CB A:ALA167 4.1 18.6 1.0
CG1 A:VAL228 4.1 18.3 1.0
C21 A:N5W902 4.2 30.8 1.0
HG11 A:VAL228 4.3 22.0 1.0
HA3 A:GLY232 4.3 15.6 1.0
CG A:ASP185 4.3 19.7 1.0
HB2 A:ASP185 4.4 22.6 1.0
OG A:SER163 4.5 19.0 1.0
O A:HOH1063 4.5 22.3 1.0
HB3 A:ASP185 4.6 22.6 1.0
HE3 A:TRP182 4.6 20.6 1.0
C07 A:N5W902 4.6 25.8 1.0
CB A:ASP185 4.7 18.8 1.0
H211 A:N5W902 4.7 36.9 1.0
HA A:LEU164 4.7 22.1 1.0
O A:VAL228 4.8 15.5 1.0
HE1 A:PHE168 4.8 18.9 1.0
HA2 A:GLY232 4.8 15.6 1.0
HA A:TRP182 4.9 21.4 1.0
O A:LEU160 4.9 17.3 1.0
HB3 A:ASN181 4.9 21.0 1.0
CG A:LEU164 4.9 19.0 1.0
C08 A:N5W902 4.9 28.7 1.0
HD1 A:PHE231 4.9 24.2 1.0
HG A:LEU164 4.9 22.9 1.0
C A:SER163 5.0 19.5 1.0

Fluorine binding site 6 out of 6 in 6tev

Go back to Fluorine Binding Sites List in 6tev
Fluorine binding site 6 out of 6 in the The Structure of CYP121 in Complex with Inhibitor L44


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 6 of The Structure of CYP121 in Complex with Inhibitor L44 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F902

b:69.4
occ:1.00
F04 A:N5W902 0.0 69.4 1.0
C02 A:N5W902 1.4 63.9 1.0
F01 A:N5W902 2.2 69.1 1.0
F03 A:N5W902 2.2 66.6 1.0
HG13 A:VAL228 2.4 22.0 1.0
C05 A:N5W902 2.4 45.6 1.0
HG11 A:VAL228 2.4 22.0 1.0
CG1 A:VAL228 2.7 18.3 1.0
HE3 A:TRP182 2.8 20.6 1.0
HG12 A:VAL228 2.8 22.0 1.0
HA A:TRP182 3.0 21.4 1.0
HB2 A:ASP185 3.1 22.6 1.0
H221 A:N5W902 3.2 45.9 1.0
C22 A:N5W902 3.2 38.2 1.0
C06 A:N5W902 3.3 33.5 1.0
OD2 A:ASP185 3.4 19.4 1.0
H061 A:N5W902 3.4 40.2 1.0
CE3 A:TRP182 3.4 17.1 1.0
CB A:ASP185 3.7 18.8 1.0
HB3 A:ASP185 3.8 22.6 1.0
O A:HOH1262 3.8 24.9 1.0
HZ3 A:TRP182 3.8 23.7 1.0
CZ3 A:TRP182 4.0 19.8 1.0
CA A:TRP182 4.0 17.8 1.0
CG A:ASP185 4.0 19.7 1.0
CB A:VAL228 4.2 17.1 1.0
O A:HOH1063 4.2 22.3 1.0
O A:HOH1129 4.3 22.7 1.0
CD2 A:TRP182 4.3 16.8 1.0
HB2 A:TRP182 4.3 20.7 1.0
HG21 A:VAL228 4.5 20.8 1.0
HG22 A:VAL228 4.5 20.8 1.0
O A:ASN181 4.5 18.0 1.0
C21 A:N5W902 4.5 30.8 1.0
C07 A:N5W902 4.6 25.8 1.0
CB A:TRP182 4.6 17.2 1.0
N A:TRP182 4.6 18.0 1.0
CG2 A:VAL228 4.6 17.3 1.0
HB A:VAL228 4.6 20.5 1.0
HB3 A:SER163 4.7 22.6 1.0
HB2 A:ALA167 4.7 22.3 1.0
O A:TRP182 4.7 15.6 1.0
HB1 A:ALA167 4.8 22.3 1.0
C A:ASN181 4.8 18.5 1.0
O A:HOH1028 4.8 27.9 1.0
HG A:SER163 4.8 22.8 1.0
CG A:TRP182 4.8 17.2 1.0
O A:VAL228 4.9 15.5 1.0
C A:TRP182 4.9 17.4 1.0
HA A:VAL228 4.9 18.6 1.0
HB2 A:SER163 4.9 22.6 1.0
CA A:VAL228 5.0 15.5 1.0

Reference:

S.Adam, J.Koehnke. The Structure of CYP121 in Complex with Inhibitor L44 To Be Published.
Page generated: Fri Aug 2 02:03:43 2024

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