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Fluorine in PDB 6tuf: Human Aldose Reductase in Complex with ALR43

Enzymatic activity of Human Aldose Reductase in Complex with ALR43

All present enzymatic activity of Human Aldose Reductase in Complex with ALR43:
1.1.1.21; 1.1.1.300; 1.1.1.372; 1.1.1.54;

Protein crystallography data

The structure of Human Aldose Reductase in Complex with ALR43, PDB code: 6tuf was solved by A.Sandner, A.Heine, G.Klebe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.76 / 1.15
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 47.175, 66.44, 49.219, 90, 92.4, 90
R / Rfree (%) 12.9 / 15.2

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Human Aldose Reductase in Complex with ALR43 (pdb code 6tuf). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Human Aldose Reductase in Complex with ALR43, PDB code: 6tuf:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 6tuf

Go back to Fluorine Binding Sites List in 6tuf
Fluorine binding site 1 out of 2 in the Human Aldose Reductase in Complex with ALR43


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Human Aldose Reductase in Complex with ALR43 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F403

b:34.4
occ:0.59
F A:NXQ403 0.0 34.4 0.6
F A:NXQ403 0.2 9.4 0.4
C4 A:NXQ403 1.2 7.6 0.4
C4 A:NXQ403 1.4 33.9 0.6
C3 A:NXQ403 2.2 8.9 0.4
C5 A:NXQ403 2.3 7.2 0.4
C5 A:NXQ403 2.3 33.7 0.6
C3 A:NXQ403 2.3 33.8 0.6
HG13 A:VAL47 2.7 10.2 1.0
HD1 A:TYR48 2.8 8.6 1.0
O A:VAL47 3.0 8.4 1.0
HG22 A:VAL47 3.1 10.1 1.0
HA A:TYR48 3.1 9.2 1.0
HE1 A:TRP20 3.4 11.1 1.0
C2 A:NXQ403 3.4 9.2 0.4
C6 A:NXQ403 3.5 7.2 0.4
C A:VAL47 3.6 7.7 1.0
C6 A:NXQ403 3.6 33.7 0.6
C2 A:NXQ403 3.6 33.9 0.6
HD1 A:TRP20 3.6 10.8 1.0
CG1 A:VAL47 3.6 8.5 1.0
CD1 A:TYR48 3.7 7.2 1.0
O A:HOH710 3.7 18.3 1.0
NE1 A:TRP20 3.8 9.3 1.0
CD1 A:TRP20 3.9 9.0 1.0
CG2 A:VAL47 3.9 8.4 1.0
CA A:TYR48 4.0 7.7 1.0
C1 A:NXQ403 4.0 8.6 0.4
HE1 A:TYR48 4.0 9.6 1.0
N A:TYR48 4.0 6.9 1.0
HG11 A:VAL47 4.1 10.2 1.0
C1 A:NXQ403 4.1 33.9 0.6
HG21 A:VAL47 4.2 10.1 1.0
CB A:VAL47 4.2 7.8 1.0
HG12 A:VAL47 4.2 10.2 1.0
CE1 A:TYR48 4.3 8.0 1.0
CA A:VAL47 4.5 8.5 1.0
HG23 A:VAL47 4.7 10.1 1.0
H A:TYR48 4.7 8.3 1.0
O1 A:NXQ403 4.7 7.1 0.4
CG A:TYR48 4.7 6.9 1.0
O A:HOH657 4.7 12.2 1.0
O1 A:NXQ403 4.8 33.5 0.6
CB A:TYR48 4.8 7.0 1.0
CE2 A:TRP20 4.9 9.3 1.0
C7 A:NXQ403 4.9 7.1 0.4
C A:TYR48 4.9 7.5 1.0
HA A:VAL47 5.0 10.2 1.0
C7 A:NXQ403 5.0 33.2 0.6

Fluorine binding site 2 out of 2 in 6tuf

Go back to Fluorine Binding Sites List in 6tuf
Fluorine binding site 2 out of 2 in the Human Aldose Reductase in Complex with ALR43


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Human Aldose Reductase in Complex with ALR43 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F403

b:9.4
occ:0.41
F A:NXQ403 0.0 9.4 0.4
F A:NXQ403 0.2 34.4 0.6
C4 A:NXQ403 1.4 7.6 0.4
C4 A:NXQ403 1.5 33.9 0.6
C5 A:NXQ403 2.3 7.2 0.4
C3 A:NXQ403 2.3 8.9 0.4
C5 A:NXQ403 2.4 33.7 0.6
C3 A:NXQ403 2.5 33.8 0.6
HD1 A:TYR48 2.7 8.6 1.0
HG13 A:VAL47 2.7 10.2 1.0
HA A:TYR48 3.0 9.2 1.0
O A:VAL47 3.0 8.4 1.0
HG22 A:VAL47 3.2 10.1 1.0
HE1 A:TRP20 3.3 11.1 1.0
HD1 A:TRP20 3.4 10.8 1.0
CD1 A:TYR48 3.5 7.2 1.0
C A:VAL47 3.6 7.7 1.0
C6 A:NXQ403 3.6 7.2 0.4
C2 A:NXQ403 3.6 9.2 0.4
NE1 A:TRP20 3.7 9.3 1.0
O A:HOH710 3.7 18.3 1.0
C6 A:NXQ403 3.7 33.7 0.6
CG1 A:VAL47 3.7 8.5 1.0
CD1 A:TRP20 3.8 9.0 1.0
C2 A:NXQ403 3.8 33.9 0.6
CA A:TYR48 3.8 7.7 1.0
HE1 A:TYR48 3.9 9.6 1.0
N A:TYR48 3.9 6.9 1.0
CG2 A:VAL47 4.0 8.4 1.0
C1 A:NXQ403 4.1 8.6 0.4
HG11 A:VAL47 4.2 10.2 1.0
CE1 A:TYR48 4.2 8.0 1.0
HG12 A:VAL47 4.2 10.2 1.0
C1 A:NXQ403 4.3 33.9 0.6
CB A:VAL47 4.3 7.8 1.0
HG21 A:VAL47 4.3 10.1 1.0
O A:HOH657 4.5 12.2 1.0
CG A:TYR48 4.5 6.9 1.0
CA A:VAL47 4.5 8.5 1.0
H A:TYR48 4.6 8.3 1.0
CB A:TYR48 4.7 7.0 1.0
O1 A:NXQ403 4.7 7.1 0.4
CE2 A:TRP20 4.8 9.3 1.0
C A:TYR48 4.8 7.5 1.0
HG23 A:VAL47 4.8 10.1 1.0
O1 A:NXQ403 4.8 33.5 0.6
CG A:TRP20 4.9 8.5 1.0
C7 A:NXQ403 4.9 7.1 0.4
HB3 A:TYR48 4.9 8.4 1.0

Reference:

A.Sandner, A.Heine, G.Klebe, K.Ngo. Human Aldose Reductase in Complex with SAR25 To Be Published.
Page generated: Fri Aug 2 02:11:08 2024

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