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Fluorine in PDB 6vhn: Wild Type Egfr in Complex with LN2057

Enzymatic activity of Wild Type Egfr in Complex with LN2057

All present enzymatic activity of Wild Type Egfr in Complex with LN2057:
2.7.10.1;

Protein crystallography data

The structure of Wild Type Egfr in Complex with LN2057, PDB code: 6vhn was solved by D.E.Heppner, M.J.Eck, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 59.96 / 2.40
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 146.865, 146.865, 146.865, 90.00, 90.00, 90.00
R / Rfree (%) 19.9 / 20

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Wild Type Egfr in Complex with LN2057 (pdb code 6vhn). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Wild Type Egfr in Complex with LN2057, PDB code: 6vhn:

Fluorine binding site 1 out of 1 in 6vhn

Go back to Fluorine Binding Sites List in 6vhn
Fluorine binding site 1 out of 1 in the Wild Type Egfr in Complex with LN2057


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Wild Type Egfr in Complex with LN2057 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1101

b:65.3
occ:1.00
F34 A:QQJ1101 0.0 65.3 1.0
C06 A:QQJ1101 1.3 62.0 1.0
C03 A:QQJ1101 2.3 55.0 1.0
C09 A:QQJ1101 2.3 59.7 1.0
CB A:LEU788 3.0 56.1 1.0
C A:LEU788 3.2 57.5 1.0
O A:LEU788 3.3 58.3 1.0
N A:ILE789 3.4 49.2 1.0
C01 A:QQJ1101 3.5 61.0 1.0
C11 A:QQJ1101 3.6 57.9 1.0
CB A:THR790 3.6 47.9 1.0
C A:ILE789 3.7 53.3 1.0
CA A:LEU788 3.7 55.5 1.0
CG2 A:THR790 3.7 40.1 1.0
N A:THR790 3.8 47.5 1.0
CD1 A:LEU777 3.8 55.0 1.0
CA A:ILE789 4.0 50.9 1.0
C13 A:QQJ1101 4.0 61.7 1.0
O A:ILE789 4.0 47.7 1.0
CD1 A:LEU788 4.2 64.9 1.0
CG A:LEU788 4.3 68.8 1.0
CA A:THR790 4.3 44.2 1.0
CE A:MET766 4.4 55.2 1.0
SD A:MET766 4.5 57.4 1.0
O A:ALA743 4.6 48.9 1.0
OG1 A:THR790 4.7 53.6 1.0
CB A:LYS745 4.7 60.5 1.0
N A:LEU788 4.9 62.4 1.0

Reference:

D.E.Heppner, M.Gunther, F.Wittlinger, S.A.Laufer, M.J.Eck. Structural Basis For Egfr Mutant Inhibition By Trisubstituted Imidazole Inhibitors. J.Med.Chem. 2020.
ISSN: ISSN 0022-2623
PubMed: 32243152
DOI: 10.1021/ACS.JMEDCHEM.0C00200
Page generated: Fri Aug 2 03:04:44 2024

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