Fluorine in PDB 6wj5: Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334
Fluorine Binding Sites:
Fluorine binding site 1 out
of 32 in 6wj5
Go back to
Fluorine Binding Sites List in 6wj5
Fluorine binding site 1 out
of 32 in the Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1101
b:52.9
occ:1.00
|
F19
|
A:LXY1101
|
0.0
|
52.9
|
1.0
|
C16
|
A:LXY1101
|
1.4
|
52.9
|
1.0
|
HG23
|
A:VAL948
|
2.3
|
78.6
|
1.0
|
C17
|
A:LXY1101
|
2.3
|
52.9
|
1.0
|
C15
|
A:LXY1101
|
2.3
|
52.9
|
1.0
|
HG13
|
A:VAL948
|
2.5
|
78.6
|
1.0
|
H171
|
A:LXY1101
|
2.6
|
52.9
|
1.0
|
H151
|
A:LXY1101
|
2.6
|
52.9
|
1.0
|
HB
|
A:VAL948
|
2.7
|
78.6
|
1.0
|
CG2
|
A:VAL948
|
3.0
|
78.6
|
1.0
|
CB
|
A:VAL948
|
3.1
|
78.6
|
1.0
|
HE1
|
A:PHE944
|
3.2
|
76.6
|
1.0
|
CG1
|
A:VAL948
|
3.2
|
78.6
|
1.0
|
HG21
|
A:VAL948
|
3.3
|
78.6
|
1.0
|
HB3
|
A:MET912
|
3.4
|
90.7
|
1.0
|
HA
|
A:LEU881
|
3.6
|
84.7
|
1.0
|
C14
|
A:LXY1101
|
3.6
|
52.9
|
1.0
|
C18
|
A:LXY1101
|
3.6
|
52.9
|
1.0
|
CE1
|
A:PHE944
|
3.7
|
76.6
|
1.0
|
HD2
|
A:PHE884
|
3.8
|
76.0
|
1.0
|
HZ
|
A:PHE944
|
3.9
|
76.6
|
1.0
|
HG11
|
A:VAL948
|
3.9
|
78.6
|
1.0
|
HB2
|
A:MET912
|
3.9
|
90.7
|
1.0
|
HG22
|
A:VAL948
|
4.0
|
78.6
|
1.0
|
O
|
A:THR908
|
4.0
|
84.9
|
1.0
|
HB2
|
A:LEU881
|
4.0
|
84.7
|
1.0
|
HD12
|
A:LEU881
|
4.0
|
84.7
|
1.0
|
HG12
|
A:VAL948
|
4.0
|
78.6
|
1.0
|
CZ
|
A:PHE944
|
4.1
|
76.6
|
1.0
|
C13
|
A:LXY1101
|
4.1
|
52.9
|
1.0
|
CB
|
A:MET912
|
4.2
|
90.7
|
1.0
|
HD11
|
A:LEU952
|
4.2
|
77.0
|
1.0
|
HD13
|
A:LEU881
|
4.4
|
84.7
|
1.0
|
HA
|
A:MET912
|
4.4
|
90.7
|
1.0
|
H181
|
A:LXY1101
|
4.5
|
52.9
|
1.0
|
H141
|
A:LXY1101
|
4.5
|
52.9
|
1.0
|
CA
|
A:LEU881
|
4.5
|
84.7
|
1.0
|
CD2
|
A:PHE884
|
4.5
|
76.0
|
1.0
|
HA
|
A:PHE909
|
4.5
|
85.7
|
1.0
|
CD1
|
A:PHE944
|
4.6
|
76.6
|
1.0
|
CA
|
A:VAL948
|
4.6
|
78.6
|
1.0
|
CD1
|
A:LEU881
|
4.7
|
84.7
|
1.0
|
CB
|
A:LEU881
|
4.7
|
84.7
|
1.0
|
HD1
|
A:PHE944
|
4.8
|
76.6
|
1.0
|
HE2
|
A:PHE884
|
4.8
|
76.0
|
1.0
|
HG
|
A:LEU880
|
4.8
|
84.7
|
1.0
|
HB2
|
A:PHE884
|
4.8
|
76.0
|
1.0
|
HA
|
A:VAL948
|
4.9
|
78.6
|
1.0
|
HB
|
A:THR908
|
4.9
|
84.9
|
1.0
|
CA
|
A:MET912
|
4.9
|
90.7
|
1.0
|
C
|
A:THR908
|
5.0
|
84.9
|
1.0
|
|
Fluorine binding site 2 out
of 32 in 6wj5
Go back to
Fluorine Binding Sites List in 6wj5
Fluorine binding site 2 out
of 32 in the Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1101
b:52.9
occ:1.00
|
F31
|
A:LXY1101
|
0.0
|
52.9
|
1.0
|
C30
|
A:LXY1101
|
1.3
|
52.9
|
1.0
|
F32
|
A:LXY1101
|
2.1
|
52.9
|
1.0
|
F33
|
A:LXY1101
|
2.1
|
52.9
|
1.0
|
C29
|
A:LXY1101
|
2.4
|
52.9
|
1.0
|
H281
|
A:LXY1101
|
2.5
|
52.9
|
1.0
|
HD13
|
A:LEU871
|
2.7
|
105.8
|
1.0
|
C28
|
A:LXY1101
|
2.8
|
52.9
|
1.0
|
HB2
|
A:LEU871
|
3.6
|
105.8
|
1.0
|
C24
|
A:LXY1101
|
3.6
|
52.9
|
1.0
|
CD1
|
A:LEU871
|
3.7
|
105.8
|
1.0
|
HG21
|
B:ILE946
|
3.8
|
82.4
|
1.0
|
H232
|
A:LXY1101
|
3.8
|
52.9
|
1.0
|
HD12
|
B:ILE946
|
3.9
|
82.4
|
1.0
|
HA
|
A:LEU871
|
3.9
|
105.8
|
1.0
|
HD11
|
A:LEU871
|
4.0
|
105.8
|
1.0
|
N27
|
A:LXY1101
|
4.1
|
52.9
|
1.0
|
C23
|
A:LXY1101
|
4.2
|
52.9
|
1.0
|
HD23
|
A:LEU871
|
4.2
|
105.8
|
1.0
|
HG22
|
A:THR874
|
4.3
|
98.4
|
1.0
|
HD12
|
A:LEU871
|
4.4
|
105.8
|
1.0
|
CB
|
A:LEU871
|
4.4
|
105.8
|
1.0
|
HD11
|
A:LEU867
|
4.4
|
93.8
|
1.0
|
HG
|
A:LEU870
|
4.4
|
96.0
|
1.0
|
CG
|
A:LEU871
|
4.6
|
105.8
|
1.0
|
H231
|
A:LXY1101
|
4.6
|
52.9
|
1.0
|
CA
|
A:LEU871
|
4.6
|
105.8
|
1.0
|
HG22
|
B:ILE946
|
4.7
|
82.4
|
1.0
|
HD12
|
A:LEU867
|
4.7
|
93.8
|
1.0
|
CG2
|
B:ILE946
|
4.7
|
82.4
|
1.0
|
C25
|
A:LXY1101
|
4.7
|
52.9
|
1.0
|
OG1
|
A:THR874
|
4.8
|
98.4
|
1.0
|
HB
|
A:THR874
|
4.8
|
98.4
|
1.0
|
C26
|
A:LXY1101
|
4.9
|
52.9
|
1.0
|
CD2
|
A:LEU871
|
4.9
|
105.8
|
1.0
|
CD1
|
B:ILE946
|
5.0
|
82.4
|
1.0
|
HG1
|
A:THR874
|
5.0
|
98.4
|
1.0
|
HD23
|
A:LEU870
|
5.0
|
96.0
|
1.0
|
|
Fluorine binding site 3 out
of 32 in 6wj5
Go back to
Fluorine Binding Sites List in 6wj5
Fluorine binding site 3 out
of 32 in the Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1101
b:52.9
occ:1.00
|
F32
|
A:LXY1101
|
0.0
|
52.9
|
1.0
|
C30
|
A:LXY1101
|
1.3
|
52.9
|
1.0
|
H232
|
A:LXY1101
|
2.1
|
52.9
|
1.0
|
F31
|
A:LXY1101
|
2.1
|
52.9
|
1.0
|
F33
|
A:LXY1101
|
2.1
|
52.9
|
1.0
|
C29
|
A:LXY1101
|
2.4
|
52.9
|
1.0
|
C23
|
A:LXY1101
|
2.7
|
52.9
|
1.0
|
HG
|
A:LEU870
|
2.8
|
96.0
|
1.0
|
HG21
|
B:ILE946
|
2.8
|
82.4
|
1.0
|
C24
|
A:LXY1101
|
2.9
|
52.9
|
1.0
|
H231
|
A:LXY1101
|
2.9
|
52.9
|
1.0
|
HG22
|
B:ILE946
|
2.9
|
82.4
|
1.0
|
HD23
|
A:LEU870
|
3.1
|
96.0
|
1.0
|
HD21
|
A:LEU870
|
3.3
|
96.0
|
1.0
|
CG2
|
B:ILE946
|
3.4
|
82.4
|
1.0
|
CD2
|
A:LEU870
|
3.5
|
96.0
|
1.0
|
C28
|
A:LXY1101
|
3.5
|
52.9
|
1.0
|
CG
|
A:LEU870
|
3.6
|
96.0
|
1.0
|
HD12
|
B:ILE946
|
3.7
|
82.4
|
1.0
|
HD12
|
A:LEU867
|
3.9
|
93.8
|
1.0
|
H281
|
A:LXY1101
|
3.9
|
52.9
|
1.0
|
HG23
|
B:ILE946
|
3.9
|
82.4
|
1.0
|
HG12
|
B:ILE946
|
4.0
|
82.4
|
1.0
|
N22
|
A:LXY1101
|
4.0
|
52.9
|
1.0
|
HD11
|
A:LEU867
|
4.1
|
93.8
|
1.0
|
HA
|
A:LEU871
|
4.2
|
105.8
|
1.0
|
C25
|
A:LXY1101
|
4.2
|
52.9
|
1.0
|
OG1
|
A:THR874
|
4.2
|
98.4
|
1.0
|
HB3
|
A:LEU870
|
4.2
|
96.0
|
1.0
|
HB2
|
A:LEU871
|
4.3
|
105.8
|
1.0
|
HD13
|
A:LEU871
|
4.3
|
105.8
|
1.0
|
H221
|
A:LXY1101
|
4.3
|
52.9
|
1.0
|
HG1
|
A:THR874
|
4.4
|
98.4
|
1.0
|
HD11
|
A:LEU870
|
4.5
|
96.0
|
1.0
|
CD1
|
A:LEU867
|
4.5
|
93.8
|
1.0
|
CG1
|
B:ILE946
|
4.5
|
82.4
|
1.0
|
CD1
|
B:ILE946
|
4.5
|
82.4
|
1.0
|
CB
|
A:LEU870
|
4.5
|
96.0
|
1.0
|
HG22
|
A:THR874
|
4.6
|
98.4
|
1.0
|
HD22
|
A:LEU870
|
4.6
|
96.0
|
1.0
|
CB
|
B:ILE946
|
4.6
|
82.4
|
1.0
|
CD1
|
A:LEU870
|
4.6
|
96.0
|
1.0
|
N27
|
A:LXY1101
|
4.7
|
52.9
|
1.0
|
N
|
A:LEU871
|
4.7
|
105.8
|
1.0
|
C
|
A:LEU870
|
4.8
|
96.0
|
1.0
|
CA
|
A:LEU871
|
4.9
|
105.8
|
1.0
|
O
|
A:LEU870
|
4.9
|
96.0
|
1.0
|
H251
|
A:LXY1101
|
4.9
|
52.9
|
1.0
|
H
|
A:LEU871
|
4.9
|
105.8
|
1.0
|
C26
|
A:LXY1101
|
4.9
|
52.9
|
1.0
|
|
Fluorine binding site 4 out
of 32 in 6wj5
Go back to
Fluorine Binding Sites List in 6wj5
Fluorine binding site 4 out
of 32 in the Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1101
b:52.9
occ:1.00
|
F33
|
A:LXY1101
|
0.0
|
52.9
|
1.0
|
C30
|
A:LXY1101
|
1.3
|
52.9
|
1.0
|
F32
|
A:LXY1101
|
2.1
|
52.9
|
1.0
|
F31
|
A:LXY1101
|
2.1
|
52.9
|
1.0
|
C29
|
A:LXY1101
|
2.4
|
52.9
|
1.0
|
HA
|
A:LEU871
|
2.4
|
105.8
|
1.0
|
H232
|
A:LXY1101
|
2.7
|
52.9
|
1.0
|
OG1
|
A:THR874
|
2.7
|
98.4
|
1.0
|
HG1
|
A:THR874
|
2.9
|
98.4
|
1.0
|
HD13
|
A:LEU871
|
2.9
|
105.8
|
1.0
|
HG22
|
A:THR874
|
3.0
|
98.4
|
1.0
|
HG
|
A:LEU870
|
3.0
|
96.0
|
1.0
|
HB
|
A:THR874
|
3.1
|
98.4
|
1.0
|
HD11
|
A:LEU871
|
3.2
|
105.8
|
1.0
|
C24
|
A:LXY1101
|
3.2
|
52.9
|
1.0
|
C28
|
A:LXY1101
|
3.3
|
52.9
|
1.0
|
CB
|
A:THR874
|
3.3
|
98.4
|
1.0
|
C23
|
A:LXY1101
|
3.4
|
52.9
|
1.0
|
CA
|
A:LEU871
|
3.4
|
105.8
|
1.0
|
H281
|
A:LXY1101
|
3.4
|
52.9
|
1.0
|
HB2
|
A:LEU871
|
3.4
|
105.8
|
1.0
|
CD1
|
A:LEU871
|
3.5
|
105.8
|
1.0
|
CG2
|
A:THR874
|
3.7
|
98.4
|
1.0
|
O
|
A:LEU870
|
3.8
|
96.0
|
1.0
|
N
|
A:LEU871
|
3.8
|
105.8
|
1.0
|
CB
|
A:LEU871
|
3.9
|
105.8
|
1.0
|
C
|
A:LEU870
|
3.9
|
96.0
|
1.0
|
H221
|
A:LXY1101
|
4.0
|
52.9
|
1.0
|
CG
|
A:LEU870
|
4.1
|
96.0
|
1.0
|
H231
|
A:LXY1101
|
4.1
|
52.9
|
1.0
|
N22
|
A:LXY1101
|
4.2
|
52.9
|
1.0
|
CG
|
A:LEU871
|
4.3
|
105.8
|
1.0
|
HG21
|
A:THR874
|
4.3
|
98.4
|
1.0
|
H
|
A:LEU871
|
4.3
|
105.8
|
1.0
|
HD12
|
A:LEU871
|
4.4
|
105.8
|
1.0
|
HG23
|
A:THR874
|
4.4
|
98.4
|
1.0
|
C25
|
A:LXY1101
|
4.4
|
52.9
|
1.0
|
N27
|
A:LXY1101
|
4.5
|
52.9
|
1.0
|
C
|
A:LEU871
|
4.5
|
105.8
|
1.0
|
O
|
A:LEU871
|
4.5
|
105.8
|
1.0
|
HD23
|
A:LEU870
|
4.6
|
96.0
|
1.0
|
H
|
A:THR874
|
4.6
|
98.4
|
1.0
|
H12
|
A:LXY1101
|
4.6
|
52.9
|
1.0
|
HD21
|
A:LEU870
|
4.7
|
96.0
|
1.0
|
CA
|
A:THR874
|
4.7
|
98.4
|
1.0
|
HB3
|
A:LEU870
|
4.7
|
96.0
|
1.0
|
CD2
|
A:LEU870
|
4.7
|
96.0
|
1.0
|
HG21
|
B:ILE946
|
4.8
|
82.4
|
1.0
|
HD13
|
A:LEU870
|
4.8
|
96.0
|
1.0
|
HD11
|
A:LEU870
|
4.8
|
96.0
|
1.0
|
HB3
|
A:LEU871
|
4.9
|
105.8
|
1.0
|
CB
|
A:LEU870
|
4.9
|
96.0
|
1.0
|
CD1
|
A:LEU870
|
4.9
|
96.0
|
1.0
|
C26
|
A:LXY1101
|
4.9
|
52.9
|
1.0
|
HD23
|
A:LEU871
|
5.0
|
105.8
|
1.0
|
HG22
|
B:ILE946
|
5.0
|
82.4
|
1.0
|
|
Fluorine binding site 5 out
of 32 in 6wj5
Go back to
Fluorine Binding Sites List in 6wj5
Fluorine binding site 5 out
of 32 in the Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1101
b:52.9
occ:1.00
|
F41
|
A:LXY1101
|
0.0
|
52.9
|
1.0
|
C40
|
A:LXY1101
|
1.3
|
52.9
|
1.0
|
F42
|
A:LXY1101
|
2.1
|
52.9
|
1.0
|
F43
|
A:LXY1101
|
2.1
|
52.9
|
1.0
|
C37
|
A:LXY1101
|
2.4
|
52.9
|
1.0
|
N38
|
A:LXY1101
|
3.1
|
52.9
|
1.0
|
N36
|
A:LXY1101
|
3.1
|
52.9
|
1.0
|
HG22
|
A:ILE905
|
3.6
|
86.8
|
1.0
|
HG21
|
A:ILE905
|
4.1
|
86.8
|
1.0
|
HD21
|
A:LEU881
|
4.1
|
84.7
|
1.0
|
C39
|
A:LXY1101
|
4.3
|
52.9
|
1.0
|
C35
|
A:LXY1101
|
4.3
|
52.9
|
1.0
|
CG2
|
A:ILE905
|
4.3
|
86.8
|
1.0
|
HB
|
A:ILE905
|
4.7
|
86.8
|
1.0
|
HD13
|
A:LEU902
|
4.8
|
93.8
|
1.0
|
HD23
|
A:LEU881
|
4.8
|
84.7
|
1.0
|
C34
|
A:LXY1101
|
4.8
|
52.9
|
1.0
|
HG13
|
A:ILE906
|
4.8
|
84.1
|
1.0
|
CD2
|
A:LEU881
|
4.9
|
84.7
|
1.0
|
|
Fluorine binding site 6 out
of 32 in 6wj5
Go back to
Fluorine Binding Sites List in 6wj5
Fluorine binding site 6 out
of 32 in the Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1101
b:52.9
occ:1.00
|
F42
|
A:LXY1101
|
0.0
|
52.9
|
1.0
|
C40
|
A:LXY1101
|
1.3
|
52.9
|
1.0
|
F43
|
A:LXY1101
|
2.1
|
52.9
|
1.0
|
F41
|
A:LXY1101
|
2.1
|
52.9
|
1.0
|
C37
|
A:LXY1101
|
2.4
|
52.9
|
1.0
|
N36
|
A:LXY1101
|
2.7
|
52.9
|
1.0
|
HG22
|
A:ILE905
|
2.9
|
86.8
|
1.0
|
HB2
|
A:PHE909
|
3.1
|
85.7
|
1.0
|
HD21
|
A:LEU881
|
3.2
|
84.7
|
1.0
|
HA
|
A:ILE906
|
3.4
|
84.1
|
1.0
|
N38
|
A:LXY1101
|
3.5
|
52.9
|
1.0
|
HB3
|
A:PHE909
|
3.6
|
85.7
|
1.0
|
CB
|
A:PHE909
|
3.8
|
85.7
|
1.0
|
O
|
A:ILE905
|
3.8
|
86.8
|
1.0
|
C35
|
A:LXY1101
|
4.0
|
52.9
|
1.0
|
CG2
|
A:ILE905
|
4.0
|
86.8
|
1.0
|
CG
|
A:PHE909
|
4.1
|
85.7
|
1.0
|
HD1
|
A:PHE909
|
4.1
|
85.7
|
1.0
|
C
|
A:ILE905
|
4.2
|
86.8
|
1.0
|
CD2
|
A:LEU881
|
4.2
|
84.7
|
1.0
|
HG12
|
A:ILE906
|
4.2
|
84.1
|
1.0
|
HG21
|
A:ILE905
|
4.2
|
86.8
|
1.0
|
HG13
|
A:ILE906
|
4.3
|
84.1
|
1.0
|
HG12
|
B:VAL942
|
4.3
|
83.4
|
1.0
|
CA
|
A:ILE906
|
4.3
|
84.1
|
1.0
|
CD1
|
A:PHE909
|
4.3
|
85.7
|
1.0
|
N
|
A:ILE906
|
4.3
|
84.1
|
1.0
|
HD22
|
A:LEU881
|
4.4
|
84.7
|
1.0
|
H351
|
A:LXY1101
|
4.6
|
52.9
|
1.0
|
C39
|
A:LXY1101
|
4.6
|
52.9
|
1.0
|
HD23
|
A:LEU881
|
4.6
|
84.7
|
1.0
|
HB
|
A:ILE905
|
4.6
|
86.8
|
1.0
|
HG23
|
A:ILE905
|
4.6
|
86.8
|
1.0
|
HD11
|
A:LEU881
|
4.6
|
84.7
|
1.0
|
CG1
|
A:ILE906
|
4.7
|
84.1
|
1.0
|
CB
|
A:ILE905
|
4.8
|
86.8
|
1.0
|
C34
|
A:LXY1101
|
4.8
|
52.9
|
1.0
|
CD2
|
A:PHE909
|
4.8
|
85.7
|
1.0
|
H
|
A:ILE906
|
4.9
|
84.1
|
1.0
|
H
|
A:PHE909
|
4.9
|
85.7
|
1.0
|
|
Fluorine binding site 7 out
of 32 in 6wj5
Go back to
Fluorine Binding Sites List in 6wj5
Fluorine binding site 7 out
of 32 in the Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 7 of Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1101
b:52.9
occ:1.00
|
F43
|
A:LXY1101
|
0.0
|
52.9
|
1.0
|
C40
|
A:LXY1101
|
1.3
|
52.9
|
1.0
|
F42
|
A:LXY1101
|
2.1
|
52.9
|
1.0
|
F41
|
A:LXY1101
|
2.1
|
52.9
|
1.0
|
C37
|
A:LXY1101
|
2.4
|
52.9
|
1.0
|
N38
|
A:LXY1101
|
2.7
|
52.9
|
1.0
|
HG12
|
B:VAL942
|
3.1
|
83.4
|
1.0
|
N36
|
A:LXY1101
|
3.5
|
52.9
|
1.0
|
HG12
|
A:ILE906
|
3.5
|
84.1
|
1.0
|
C39
|
A:LXY1101
|
4.0
|
52.9
|
1.0
|
HG13
|
A:ILE906
|
4.1
|
84.1
|
1.0
|
HA
|
A:ILE906
|
4.2
|
84.1
|
1.0
|
CG1
|
B:VAL942
|
4.2
|
83.4
|
1.0
|
HG23
|
B:VAL942
|
4.3
|
83.4
|
1.0
|
CG1
|
A:ILE906
|
4.3
|
84.1
|
1.0
|
C35
|
A:LXY1101
|
4.5
|
52.9
|
1.0
|
H391
|
A:LXY1101
|
4.6
|
52.9
|
1.0
|
HG11
|
B:VAL942
|
4.6
|
83.4
|
1.0
|
HG13
|
B:VAL942
|
4.6
|
83.4
|
1.0
|
HG22
|
A:ILE905
|
4.7
|
86.8
|
1.0
|
C34
|
A:LXY1101
|
4.8
|
52.9
|
1.0
|
HD11
|
A:LEU902
|
4.9
|
93.8
|
1.0
|
HB
|
B:VAL942
|
5.0
|
83.4
|
1.0
|
|
Fluorine binding site 8 out
of 32 in 6wj5
Go back to
Fluorine Binding Sites List in 6wj5
Fluorine binding site 8 out
of 32 in the Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 8 of Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1101
b:52.9
occ:1.00
|
F44
|
A:LXY1101
|
0.0
|
52.9
|
1.0
|
C4
|
A:LXY1101
|
1.4
|
52.9
|
1.0
|
H5
|
A:LXY1101
|
2.0
|
52.9
|
1.0
|
C6
|
A:LXY1101
|
2.4
|
52.9
|
1.0
|
C2
|
A:LXY1101
|
2.4
|
52.9
|
1.0
|
H3
|
A:LXY1101
|
2.4
|
52.9
|
1.0
|
H61
|
A:LXY1101
|
2.5
|
52.9
|
1.0
|
HD12
|
A:LEU952
|
2.5
|
77.0
|
1.0
|
HB3
|
A:LEU952
|
2.8
|
77.0
|
1.0
|
HD11
|
A:LEU956
|
2.8
|
74.9
|
1.0
|
H62
|
A:LXY1101
|
2.9
|
52.9
|
1.0
|
HD21
|
A:LEU956
|
3.1
|
74.9
|
1.0
|
H11
|
A:LXY1101
|
3.2
|
52.9
|
1.0
|
C1
|
A:LXY1101
|
3.3
|
52.9
|
1.0
|
HG
|
A:LEU956
|
3.4
|
74.9
|
1.0
|
CD1
|
A:LEU952
|
3.4
|
77.0
|
1.0
|
HD11
|
A:LEU952
|
3.5
|
77.0
|
1.0
|
N9
|
A:LXY1101
|
3.5
|
52.9
|
1.0
|
HD1
|
A:PHE877
|
3.5
|
95.6
|
1.0
|
C7
|
A:LXY1101
|
3.6
|
52.9
|
1.0
|
H141
|
A:LXY1101
|
3.7
|
52.9
|
1.0
|
CD1
|
A:LEU956
|
3.7
|
74.9
|
1.0
|
CB
|
A:LEU952
|
3.8
|
77.0
|
1.0
|
CG
|
A:LEU956
|
3.9
|
74.9
|
1.0
|
H12
|
A:LXY1101
|
3.9
|
52.9
|
1.0
|
HD21
|
A:LEU952
|
3.9
|
77.0
|
1.0
|
CD2
|
A:LEU956
|
3.9
|
74.9
|
1.0
|
HD12
|
A:LEU956
|
4.1
|
74.9
|
1.0
|
CG
|
A:LEU952
|
4.1
|
77.0
|
1.0
|
HB2
|
A:PHE877
|
4.2
|
95.6
|
1.0
|
HB2
|
A:LEU952
|
4.2
|
77.0
|
1.0
|
HD13
|
A:LEU952
|
4.2
|
77.0
|
1.0
|
H13
|
A:LXY1101
|
4.2
|
52.9
|
1.0
|
C14
|
A:LXY1101
|
4.3
|
52.9
|
1.0
|
H8
|
A:LXY1101
|
4.3
|
52.9
|
1.0
|
HD23
|
A:LEU956
|
4.4
|
74.9
|
1.0
|
CD1
|
A:PHE877
|
4.4
|
95.6
|
1.0
|
HD11
|
A:LEU870
|
4.4
|
96.0
|
1.0
|
CD2
|
A:LEU952
|
4.5
|
77.0
|
1.0
|
C20
|
A:LXY1101
|
4.6
|
52.9
|
1.0
|
HD13
|
A:LEU956
|
4.6
|
74.9
|
1.0
|
HD13
|
A:LEU870
|
4.6
|
96.0
|
1.0
|
HB3
|
A:PHE877
|
4.6
|
95.6
|
1.0
|
HG
|
A:SER873
|
4.7
|
100.6
|
1.0
|
S10
|
A:LXY1101
|
4.7
|
52.9
|
1.0
|
HD22
|
A:LEU956
|
4.7
|
74.9
|
1.0
|
O
|
A:LEU952
|
4.8
|
77.0
|
1.0
|
C13
|
A:LXY1101
|
4.8
|
52.9
|
1.0
|
CB
|
A:PHE877
|
4.8
|
95.6
|
1.0
|
H221
|
A:LXY1101
|
4.9
|
52.9
|
1.0
|
CA
|
A:LEU952
|
4.9
|
77.0
|
1.0
|
C
|
A:LEU952
|
4.9
|
77.0
|
1.0
|
CD1
|
A:LEU870
|
4.9
|
96.0
|
1.0
|
HD12
|
A:LEU870
|
4.9
|
96.0
|
1.0
|
OG
|
A:SER873
|
4.9
|
100.6
|
1.0
|
C15
|
A:LXY1101
|
5.0
|
52.9
|
1.0
|
HA
|
A:LEU952
|
5.0
|
77.0
|
1.0
|
|
Fluorine binding site 9 out
of 32 in 6wj5
Go back to
Fluorine Binding Sites List in 6wj5
Fluorine binding site 9 out
of 32 in the Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 9 of Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F1101
b:52.9
occ:1.00
|
F19
|
B:LXY1101
|
0.0
|
52.9
|
1.0
|
C16
|
B:LXY1101
|
1.4
|
52.9
|
1.0
|
HG22
|
B:VAL948
|
2.1
|
78.6
|
1.0
|
HG13
|
B:VAL948
|
2.2
|
78.6
|
1.0
|
C15
|
B:LXY1101
|
2.3
|
52.9
|
1.0
|
C17
|
B:LXY1101
|
2.3
|
52.9
|
1.0
|
H151
|
B:LXY1101
|
2.6
|
52.9
|
1.0
|
H171
|
B:LXY1101
|
2.6
|
52.9
|
1.0
|
HE1
|
B:PHE944
|
2.7
|
76.6
|
1.0
|
CG2
|
B:VAL948
|
3.0
|
78.6
|
1.0
|
CG1
|
B:VAL948
|
3.1
|
78.6
|
1.0
|
HG23
|
B:VAL948
|
3.3
|
78.6
|
1.0
|
HG12
|
B:VAL948
|
3.4
|
78.6
|
1.0
|
CE1
|
B:PHE944
|
3.4
|
76.6
|
1.0
|
CB
|
B:VAL948
|
3.5
|
78.6
|
1.0
|
C14
|
B:LXY1101
|
3.6
|
52.9
|
1.0
|
C18
|
B:LXY1101
|
3.6
|
52.9
|
1.0
|
HA
|
B:LEU881
|
3.6
|
84.7
|
1.0
|
HB
|
B:VAL948
|
3.7
|
78.6
|
1.0
|
HZ
|
B:PHE944
|
3.7
|
76.6
|
1.0
|
HD13
|
B:LEU881
|
3.7
|
84.7
|
1.0
|
HG21
|
B:VAL948
|
3.8
|
78.6
|
1.0
|
HB2
|
B:LEU881
|
3.9
|
84.7
|
1.0
|
HB2
|
B:MET912
|
3.9
|
90.7
|
1.0
|
CZ
|
B:PHE944
|
3.9
|
76.6
|
1.0
|
HD2
|
B:PHE884
|
3.9
|
76.0
|
1.0
|
HG11
|
B:VAL948
|
4.0
|
78.6
|
1.0
|
C13
|
B:LXY1101
|
4.1
|
52.9
|
1.0
|
O
|
B:THR908
|
4.1
|
84.9
|
1.0
|
HA
|
B:MET912
|
4.1
|
90.7
|
1.0
|
HD13
|
B:LEU952
|
4.2
|
77.0
|
1.0
|
HD12
|
B:LEU881
|
4.3
|
84.7
|
1.0
|
CD1
|
B:PHE944
|
4.4
|
76.6
|
1.0
|
HG3
|
B:MET912
|
4.4
|
90.7
|
1.0
|
H181
|
B:LXY1101
|
4.5
|
52.9
|
1.0
|
H141
|
B:LXY1101
|
4.5
|
52.9
|
1.0
|
HD23
|
B:LEU880
|
4.5
|
84.7
|
1.0
|
HB
|
B:THR908
|
4.5
|
84.9
|
1.0
|
CD1
|
B:LEU881
|
4.5
|
84.7
|
1.0
|
CA
|
B:LEU881
|
4.5
|
84.7
|
1.0
|
HD1
|
B:PHE944
|
4.5
|
76.6
|
1.0
|
CD2
|
B:PHE884
|
4.6
|
76.0
|
1.0
|
CB
|
B:LEU881
|
4.6
|
84.7
|
1.0
|
CB
|
B:MET912
|
4.7
|
90.7
|
1.0
|
HB2
|
B:PHE884
|
4.7
|
76.0
|
1.0
|
HA
|
B:PHE909
|
4.8
|
85.7
|
1.0
|
CA
|
B:MET912
|
4.9
|
90.7
|
1.0
|
HE2
|
B:PHE884
|
4.9
|
76.0
|
1.0
|
C
|
B:THR908
|
5.0
|
84.9
|
1.0
|
CA
|
B:VAL948
|
5.0
|
78.6
|
1.0
|
N
|
B:LEU881
|
5.0
|
84.7
|
1.0
|
|
Fluorine binding site 10 out
of 32 in 6wj5
Go back to
Fluorine Binding Sites List in 6wj5
Fluorine binding site 10 out
of 32 in the Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 10 of Structure of Human TRPA1 in Complex with Inhibitor Gdc-0334 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F1101
b:52.9
occ:1.00
|
F31
|
B:LXY1101
|
0.0
|
52.9
|
1.0
|
C30
|
B:LXY1101
|
1.3
|
52.9
|
1.0
|
F32
|
B:LXY1101
|
2.1
|
52.9
|
1.0
|
F33
|
B:LXY1101
|
2.1
|
52.9
|
1.0
|
C29
|
B:LXY1101
|
2.4
|
52.9
|
1.0
|
H281
|
B:LXY1101
|
2.5
|
52.9
|
1.0
|
HD13
|
B:LEU871
|
2.8
|
105.8
|
1.0
|
C28
|
B:LXY1101
|
2.8
|
52.9
|
1.0
|
C24
|
B:LXY1101
|
3.6
|
52.9
|
1.0
|
CD1
|
B:LEU871
|
3.7
|
105.8
|
1.0
|
HD12
|
B:LEU871
|
3.7
|
105.8
|
1.0
|
HB2
|
B:LEU871
|
3.7
|
105.8
|
1.0
|
HD13
|
C:ILE946
|
3.7
|
82.4
|
1.0
|
H232
|
B:LXY1101
|
3.8
|
52.9
|
1.0
|
HA
|
B:LEU871
|
3.8
|
105.8
|
1.0
|
HG21
|
C:ILE946
|
3.8
|
82.4
|
1.0
|
N27
|
B:LXY1101
|
4.1
|
52.9
|
1.0
|
HG22
|
B:THR874
|
4.2
|
98.4
|
1.0
|
C23
|
B:LXY1101
|
4.2
|
52.9
|
1.0
|
HD11
|
B:LEU871
|
4.4
|
105.8
|
1.0
|
HG
|
B:LEU870
|
4.4
|
96.0
|
1.0
|
CB
|
B:LEU871
|
4.5
|
105.8
|
1.0
|
HD11
|
B:LEU867
|
4.5
|
93.8
|
1.0
|
H231
|
B:LXY1101
|
4.6
|
52.9
|
1.0
|
CA
|
B:LEU871
|
4.6
|
105.8
|
1.0
|
HG22
|
C:ILE946
|
4.6
|
82.4
|
1.0
|
HD22
|
B:LEU871
|
4.6
|
105.8
|
1.0
|
CG
|
B:LEU871
|
4.6
|
105.8
|
1.0
|
CG2
|
C:ILE946
|
4.7
|
82.4
|
1.0
|
C25
|
B:LXY1101
|
4.7
|
52.9
|
1.0
|
CD1
|
C:ILE946
|
4.8
|
82.4
|
1.0
|
HD13
|
B:LEU867
|
4.8
|
93.8
|
1.0
|
HG23
|
B:THR874
|
4.9
|
98.4
|
1.0
|
C26
|
B:LXY1101
|
4.9
|
52.9
|
1.0
|
|
Reference:
L.Rouge,
A.Rohou.
An Oral TRPA1 Inhibitor to Target Neuroimmunity and Airway Constriction in Asthma To Be Published.
Page generated: Fri Aug 2 03:42:40 2024
|