Fluorine in PDB 6yke: Crystal Structure of YTHDC1 with Compound DHU_DC1_038

The structure of Crystal Structure of YTHDC1 with Compound DHU_DC1_038, PDB code: 6yke was solved by R.K.Bedi, D.Huang, L.Wiedmer, A.Caflisch, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.36 / 1.52
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	39.290, 103.130, 42.010, 90.00, 106.13, 90.00
R / Rfree (%)	20.5 / 23.2

The binding sites of Fluorine atom in the Crystal Structure of YTHDC1 with Compound DHU_DC1_038 (pdb code 6yke). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of YTHDC1 with Compound DHU_DC1_038, PDB code: 6yke:

Fluorine binding site 1 out of 1 in the Crystal Structure of YTHDC1 with Compound DHU_DC1_038


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of YTHDC1 with Compound DHU_DC1_038 within 5.0Å range: probe atom residue distance (Å) B Occ B:F601 b:54.5 occ:1.00 FAC B:OUQ601 0.0 54.5 1.0 CAL B:OUQ601 1.3 43.2 1.0 CAG B:OUQ601 2.3 42.5 1.0 CAE B:OUQ601 2.4 46.6 1.0 CD2 B:LEU380 3.5 34.5 1.0 CAM B:OUQ601 3.6 41.3 1.0 CAD B:OUQ601 3.6 46.9 1.0 CAF B:OUQ601 4.1 41.1 1.0 CB B:MET434 4.5 45.2 1.0 O B:HOH880 4.5 42.1 1.0 CG B:LEU380 4.6 33.4 1.0 CG B:PRO431 4.6 39.2 1.0 CD1 B:LEU380 4.7 35.3 1.0 CAN B:OUQ601 4.9 33.1 1.0

R.K.Bedi, D.Huang, L.Wiedmer, A.Caflisch. Crystal Structure of YTHDC1 with Compound DHU_DC1_038 To Be Published.