Fluorine in PDB 7akg: Crystal Structure of STK17B with Bound Dovitinib

Enzymatic activity of Crystal Structure of STK17B with Bound Dovitinib

All present enzymatic activity of Crystal Structure of STK17B with Bound Dovitinib:
2.7.11.1;

Protein crystallography data

The structure of Crystal Structure of STK17B with Bound Dovitinib, PDB code: 7akg was solved by A.Chaikuad, S.Knapp, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.27 / 2.08
Space group P 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 84.289, 84.289, 114.170, 90.00, 90.00, 90.00
R / Rfree (%) 18.6 / 21.9

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of STK17B with Bound Dovitinib (pdb code 7akg). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of STK17B with Bound Dovitinib, PDB code: 7akg:

Fluorine binding site 1 out of 1 in 7akg

Go back to Fluorine Binding Sites List in 7akg
Fluorine binding site 1 out of 1 in the Crystal Structure of STK17B with Bound Dovitinib


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of STK17B with Bound Dovitinib within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F406

b:36.4
occ:1.00
F22 A:38O406 0.0 36.4 1.0
C21 A:38O406 1.3 31.8 1.0
C23 A:38O406 2.3 32.5 1.0
C20 A:38O406 2.3 32.0 1.0
N19 A:38O406 2.6 30.8 1.0
C18 A:38O406 2.9 32.0 1.0
O A:HOH672 3.3 65.0 1.0
C24 A:38O406 3.6 30.2 1.0
O A:HOH654 3.6 53.3 1.0
C26 A:38O406 3.6 30.0 1.0
O A:HOH655 3.7 68.5 1.0
CG2 A:VAL47 3.8 32.7 1.0
CG1 A:VAL47 4.1 33.0 1.0
C25 A:38O406 4.1 31.9 1.0
C17 A:38O406 4.3 31.5 1.0
CB A:VAL47 4.3 33.2 1.0
CG2 A:VAL178 4.5 33.0 1.0
N27 A:38O406 4.8 32.4 1.0
CD1 A:LEU165 4.8 35.7 1.0
CB A:VAL178 4.9 33.4 1.0

Reference:

A.Chaikuad, S.Knapp, Structural Genomics Consortium (Sgc). Crystal Structure of STK17B with Bound Dovitinib To Be Published.
Page generated: Sun Dec 13 13:50:09 2020

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