Atomistry » Fluorine » PDB 7adu-7ayj » 7ayj
Atomistry »
  Fluorine »
    PDB 7adu-7ayj »
      7ayj »

Fluorine in PDB 7ayj: Metallo Beta-Lactamse Vim-1 with A Sulfamoyl Inhibitor.

Protein crystallography data

The structure of Metallo Beta-Lactamse Vim-1 with A Sulfamoyl Inhibitor., PDB code: 7ayj was solved by A.J.M.Farley, I.Ermolovich, K.Calvopina, P.Rabe, J.Brem, C.J.Schofield, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.19 / 1.21
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 39.533, 67.43, 40.267, 90, 93.51, 90
R / Rfree (%) 17 / 19.5

Other elements in 7ayj:

The structure of Metallo Beta-Lactamse Vim-1 with A Sulfamoyl Inhibitor. also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Metallo Beta-Lactamse Vim-1 with A Sulfamoyl Inhibitor. (pdb code 7ayj). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Metallo Beta-Lactamse Vim-1 with A Sulfamoyl Inhibitor., PDB code: 7ayj:

Fluorine binding site 1 out of 1 in 7ayj

Go back to Fluorine Binding Sites List in 7ayj
Fluorine binding site 1 out of 1 in the Metallo Beta-Lactamse Vim-1 with A Sulfamoyl Inhibitor.


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Metallo Beta-Lactamse Vim-1 with A Sulfamoyl Inhibitor. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F303

b:41.0
occ:0.75
F A:S9N303 0.0 41.0 0.8
C6 A:S9N303 1.4 26.1 0.8
C7 A:S9N303 2.3 33.1 0.8
C5 A:S9N303 2.3 27.5 0.8
H2 A:S9N303 2.6 33.0 0.8
H3 A:S9N303 2.6 39.7 0.8
O A:HOH641 2.8 36.9 1.0
O A:HOH561 2.8 35.9 1.0
HE1 A:HIS240 2.9 17.9 0.2
O A:HOH669 2.9 40.4 1.0
HA2 A:GLY209 3.4 32.7 1.0
O A:HOH559 3.5 32.5 1.0
CE1 A:HIS240 3.6 14.9 0.2
C8 A:S9N303 3.6 26.8 0.8
C4 A:S9N303 3.6 28.5 0.8
O A:HOH507 3.9 20.6 0.8
NE2 A:HIS240 3.9 19.6 0.2
C3 A:S9N303 4.1 28.4 0.8
CA A:GLY209 4.2 27.2 1.0
HG A:SER207 4.2 47.5 1.0
OG A:SER207 4.3 39.6 1.0
HA3 A:GLY209 4.3 32.7 1.0
O A:HOH661 4.4 34.6 1.0
HE1 A:TYR67 4.4 35.0 1.0
H4 A:S9N303 4.5 32.1 0.8
H1 A:S9N303 4.5 34.2 0.8
H A:GLY209 4.5 33.3 1.0
ND1 A:HIS240 4.7 21.2 0.2
N A:GLY209 4.8 27.8 1.0
HD1 A:TYR67 4.8 28.4 1.0
O A:HOH628 4.8 23.2 0.8
HE1 A:HIS201 5.0 26.2 0.5
HD1 A:HIS240 5.0 25.5 0.2

Reference:

A.J.M.Farley, A.J.M.Farley, I.Ermolovich, K.Calvopina, P.Rabe, J.Brem, C.J.Schofield. N/A N/A.
Page generated: Fri Aug 2 05:50:37 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy