Fluorine in PDB 7b33: MST3 in Complex with MRIA11

Enzymatic activity of MST3 in Complex with MRIA11

All present enzymatic activity of MST3 in Complex with MRIA11:
2.7.11.1;

Protein crystallography data

The structure of MST3 in Complex with MRIA11, PDB code: 7b33 was solved by R.Tesch, M.Rak, A.C.Joerger, S.Knapp, Structural Genomics Consortium(Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.41 / 1.90
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 98.972, 58.954, 61.441, 90.00, 93.13, 90.00
R / Rfree (%) 18.1 / 20.8

Other elements in 7b33:

The structure of MST3 in Complex with MRIA11 also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the MST3 in Complex with MRIA11 (pdb code 7b33). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the MST3 in Complex with MRIA11, PDB code: 7b33:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 7b33

Go back to Fluorine Binding Sites List in 7b33
Fluorine binding site 1 out of 2 in the MST3 in Complex with MRIA11


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of MST3 in Complex with MRIA11 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F905

b:46.4
occ:1.00
F A:SQE905 0.0 46.4 1.0
C13 A:SQE905 1.3 45.2 1.0
F1 A:SQE905 2.1 50.5 1.0
C12 A:SQE905 2.4 35.6 1.0
N3 A:SQE905 2.8 30.1 1.0
OG A:SER46 3.2 61.7 1.0
CD2 A:PHE47 3.3 64.2 1.0
CD1 A:ILE67 3.4 42.0 1.0
CD A:LYS65 3.4 33.7 1.0
NZ A:LYS65 3.4 33.5 1.0
O A:SER46 3.5 48.0 1.0
C14 A:SQE905 3.5 36.9 1.0
CB A:PHE47 4.0 60.5 1.0
CE A:LYS65 4.0 30.3 1.0
C11 A:SQE905 4.1 28.3 1.0
CG A:PHE47 4.1 67.7 1.0
C A:SER46 4.2 53.3 1.0
CE2 A:PHE47 4.2 59.7 1.0
CD1 A:ILE109 4.2 30.9 1.0
CG1 A:ILE79 4.3 43.9 1.0
CB A:SER46 4.4 55.9 1.0
OE1 A:GLU82 4.4 59.4 1.0
CG1 A:ILE67 4.5 41.0 1.0
CG2 A:ILE79 4.5 38.7 1.0
C15 A:SQE905 4.6 38.0 1.0
CG A:LYS65 4.7 31.9 1.0
CB A:ILE79 4.8 39.9 1.0
C16 A:SQE905 4.8 34.0 1.0
O A:HOH1008 4.9 38.6 1.0
CA A:SER46 4.9 54.6 1.0
N A:PHE47 4.9 57.8 1.0
CA A:PHE47 5.0 61.5 1.0
CD1 A:ILE79 5.0 43.8 1.0

Fluorine binding site 2 out of 2 in 7b33

Go back to Fluorine Binding Sites List in 7b33
Fluorine binding site 2 out of 2 in the MST3 in Complex with MRIA11


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of MST3 in Complex with MRIA11 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F905

b:50.5
occ:1.00
F1 A:SQE905 0.0 50.5 1.0
C13 A:SQE905 1.4 45.2 1.0
F A:SQE905 2.1 46.4 1.0
C12 A:SQE905 2.4 35.6 1.0
C14 A:SQE905 2.8 36.9 1.0
CA A:ILE79 3.3 40.6 1.0
CD2 A:PHE47 3.4 64.2 1.0
OE1 A:GLU82 3.4 59.4 1.0
CG1 A:ILE79 3.5 43.9 1.0
N3 A:SQE905 3.5 30.1 1.0
CE2 A:PHE47 3.6 59.7 1.0
CB A:ILE79 3.7 39.9 1.0
CG2 A:ILE79 3.7 38.7 1.0
O A:ILE79 4.0 39.1 1.0
OG A:SER46 4.1 61.7 1.0
CB A:GLU82 4.1 41.6 1.0
C A:ILE79 4.1 40.6 1.0
N A:ILE79 4.2 39.2 1.0
C15 A:SQE905 4.2 38.0 1.0
O A:ASP78 4.2 46.1 1.0
CD A:GLU82 4.3 55.5 1.0
CG A:PHE47 4.5 67.7 1.0
C A:ASP78 4.5 46.0 1.0
CD1 A:ILE67 4.7 42.0 1.0
C11 A:SQE905 4.7 28.3 1.0
CD1 A:ILE79 4.8 43.8 1.0
CG A:GLU82 4.8 51.0 1.0
CZ A:PHE47 4.9 62.0 1.0
CD1 A:ILE109 4.9 30.9 1.0
C16 A:SQE905 5.0 34.0 1.0
CB A:PHE47 5.0 60.5 1.0

Reference:

R.Tesch, M.Rak, A.C.Joerger, S.Knapp, Structural Genomics Consortium (Sgc). Structure-Based Design of Selective Salt-Inducible Kinase (Sik) Inhibitors To Be Published.
Page generated: Thu Dec 17 11:18:12 2020

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