Fluorine in PDB 7b3h: Notum Complex with ARUK3003909

Enzymatic activity of Notum Complex with ARUK3003909

All present enzymatic activity of Notum Complex with ARUK3003909:
3.1.1.98;

Protein crystallography data

The structure of Notum Complex with ARUK3003909, PDB code: 7b3h was solved by Y.Zhao, E.Y.Jones, P.Fish, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.01 / 1.28
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 59.313, 72.909, 77.993, 90, 90, 90
R / Rfree (%) 19.5 / 20.4

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Notum Complex with ARUK3003909 (pdb code 7b3h). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 3 binding sites of Fluorine where determined in the Notum Complex with ARUK3003909, PDB code: 7b3h:
Jump to Fluorine binding site number: 1; 2; 3;

Fluorine binding site 1 out of 3 in 7b3h

Go back to Fluorine Binding Sites List in 7b3h
Fluorine binding site 1 out of 3 in the Notum Complex with ARUK3003909


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Notum Complex with ARUK3003909 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F507

b:25.4
occ:1.00
F01 A:SSW507 0.0 25.4 1.0
C02 A:SSW507 1.4 28.5 1.0
F04 A:SSW507 2.2 27.7 1.0
F03 A:SSW507 2.3 29.5 1.0
O05 A:SSW507 2.3 25.4 1.0
C06 A:SSW507 2.7 21.6 1.0
C07 A:SSW507 3.0 19.3 1.0
CB A:PHE268 3.3 14.5 1.0
CE1 A:PHE320 3.4 16.1 1.0
C11 A:SSW507 3.6 21.8 1.0
CG A:PHE268 3.6 14.5 1.0
CZ A:PHE320 3.8 17.9 1.0
CD2 A:PHE268 4.1 15.4 1.0
C08 A:SSW507 4.1 19.2 1.0
CD1 A:PHE268 4.4 18.2 1.0
CD1 A:PHE320 4.4 15.3 1.0
C10 A:SSW507 4.6 21.2 1.0
O A:LEU269 4.6 16.6 1.0
CA A:PHE268 4.7 12.5 1.0
CG2 A:VAL346 4.7 22.5 1.0
C09 A:SSW507 4.8 18.8 1.0
CE2 A:PHE320 4.9 16.6 1.0
CE2 A:PHE268 5.0 18.1 1.0

Fluorine binding site 2 out of 3 in 7b3h

Go back to Fluorine Binding Sites List in 7b3h
Fluorine binding site 2 out of 3 in the Notum Complex with ARUK3003909


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Notum Complex with ARUK3003909 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F507

b:29.5
occ:1.00
F03 A:SSW507 0.0 29.5 1.0
C02 A:SSW507 1.4 28.5 1.0
F04 A:SSW507 2.2 27.7 1.0
O05 A:SSW507 2.2 25.4 1.0
F01 A:SSW507 2.3 25.4 1.0
C06 A:SSW507 3.5 21.6 1.0
CZ A:PHE320 3.7 17.9 1.0
CE1 A:PHE320 3.9 16.1 1.0
C A:PRO287 4.0 30.6 1.0
CA A:PRO287 4.1 36.3 1.0
O A:HOH606 4.1 28.6 1.0
O A:PRO287 4.3 30.8 1.0
N A:THR288 4.3 31.2 1.0
C07 A:SSW507 4.3 19.3 1.0
C11 A:SSW507 4.5 21.8 1.0
CG2 A:VAL346 4.6 22.5 1.0
CG2 A:THR288 4.6 29.0 1.0
CB A:VAL346 4.8 21.8 1.0
N A:PRO287 4.8 41.9 1.0
CE2 A:PHE320 4.9 16.6 1.0
CA A:THR288 4.9 30.2 1.0
O A:LEU269 4.9 16.6 1.0
CG1 A:VAL346 4.9 22.4 1.0

Fluorine binding site 3 out of 3 in 7b3h

Go back to Fluorine Binding Sites List in 7b3h
Fluorine binding site 3 out of 3 in the Notum Complex with ARUK3003909


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Notum Complex with ARUK3003909 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F507

b:27.7
occ:1.00
F04 A:SSW507 0.0 27.7 1.0
C02 A:SSW507 1.4 28.5 1.0
F01 A:SSW507 2.2 25.4 1.0
F03 A:SSW507 2.2 29.5 1.0
O05 A:SSW507 2.3 25.4 1.0
C06 A:SSW507 2.9 21.6 1.0
C11 A:SSW507 3.2 21.8 1.0
O A:HOH606 3.2 28.6 1.0
CG1 A:VAL346 3.5 22.4 1.0
C07 A:SSW507 4.0 19.3 1.0
CG2 A:VAL346 4.0 22.5 1.0
CB A:VAL346 4.1 21.8 1.0
C22 A:SSW507 4.4 22.1 1.0
C10 A:SSW507 4.4 21.2 1.0
CZ3 A:TRP128 4.6 23.6 1.0
CA A:PRO287 5.0 36.3 1.0

Reference:

P.Fish, E.Y.Jones. Notum Inhibitor To Be Published.
Page generated: Fri Dec 17 09:10:18 2021

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy