Fluorine in PDB 7bsw: Cryo-Em Structure of A Human ATP11C-CDC50A Flippase in Ptdetn-Occluded E2-Alf State

Other elements in 7bsw:

The structure of Cryo-Em Structure of A Human ATP11C-CDC50A Flippase in Ptdetn-Occluded E2-Alf State also contains other interesting chemical elements:

Aluminium (Al) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Cryo-Em Structure of A Human ATP11C-CDC50A Flippase in Ptdetn-Occluded E2-Alf State (pdb code 7bsw). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 4 binding sites of Fluorine where determined in the Cryo-Em Structure of A Human ATP11C-CDC50A Flippase in Ptdetn-Occluded E2-Alf State, PDB code: 7bsw:
Jump to Fluorine binding site number: 1; 2; 3; 4;

Fluorine binding site 1 out of 4 in 7bsw

Go back to Fluorine Binding Sites List in 7bsw
Fluorine binding site 1 out of 4 in the Cryo-Em Structure of A Human ATP11C-CDC50A Flippase in Ptdetn-Occluded E2-Alf State


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Cryo-Em Structure of A Human ATP11C-CDC50A Flippase in Ptdetn-Occluded E2-Alf State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1101

b:31.2
occ:1.00
 F1 A:ALF1101 0.0 31.2 1.0
AL A:ALF1101 1.8 31.2 1.0
ND2 A:ASN819 2.5 2.8 1.0
F4 A:ALF1101 2.5 31.2 1.0
F3 A:ALF1101 2.5 31.2 1.0
OD1 A:ASN819 2.8 2.8 1.0
OD1 A:ASP409 3.0 24.1 1.0
CG A:ASN819 3.0 2.8 1.0
OD2 A:ASP409 3.2 24.1 1.0
CG A:ASP409 3.3 24.1 1.0
NZ A:LYS795 3.3 2.8 1.0
OD1 A:ASP820 3.3 2.8 1.0
F2 A:ALF1101 3.6 31.2 1.0
O A:ASP179 3.6 3.9 1.0
CG A:ASP820 4.1 2.8 1.0
CA A:GLY180 4.3 3.7 1.0
CB A:ASN819 4.5 2.8 1.0
OD2 A:ASP820 4.6 2.8 1.0
OD1 A:ASP816 4.6 2.8 1.0
CE A:LYS795 4.6 2.8 1.0
CB A:ASP409 4.6 24.1 1.0
C A:ASP179 4.7 3.9 1.0
N A:ASP820 5.0 2.8 1.0
N A:GLY180 5.0 3.7 1.0

Fluorine binding site 2 out of 4 in 7bsw

Go back to Fluorine Binding Sites List in 7bsw
Fluorine binding site 2 out of 4 in the Cryo-Em Structure of A Human ATP11C-CDC50A Flippase in Ptdetn-Occluded E2-Alf State


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Cryo-Em Structure of A Human ATP11C-CDC50A Flippase in Ptdetn-Occluded E2-Alf State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1101

b:31.2
occ:1.00
 F2 A:ALF1101 0.0 31.2 1.0
AL A:ALF1101 1.8 31.2 1.0
N A:THR411 2.5 2.8 1.0
F3 A:ALF1101 2.5 31.2 1.0
F4 A:ALF1101 2.5 31.2 1.0
O A:THR411 2.6 2.8 1.0
OD1 A:ASP409 2.9 24.1 1.0
CB A:THR411 2.9 2.8 1.0
OD2 A:ASP409 2.9 24.1 1.0
CA A:THR411 2.9 2.8 1.0
C A:THR411 3.1 2.8 1.0
CG A:ASP409 3.2 24.1 1.0
C A:LYS410 3.6 2.8 1.0
F1 A:ALF1101 3.6 31.2 1.0
N A:LYS410 3.7 2.8 1.0
OG1 A:THR411 3.8 2.8 1.0
CG2 A:THR411 4.0 2.8 1.0
CA A:LYS410 4.1 2.8 1.0
C A:ASP409 4.3 24.1 1.0
CB A:LYS410 4.4 2.8 1.0
N A:GLY412 4.5 2.8 1.0
OG1 A:THR674 4.5 2.8 1.0
O A:LYS410 4.5 2.8 1.0
CB A:ASP409 4.6 24.1 1.0
OE1 A:GLU181 4.6 4.0 1.0
OD2 A:ASP816 4.8 2.8 1.0
O A:ASP409 4.9 24.1 1.0
N A:GLY675 4.9 2.9 1.0
OD1 A:ASP816 4.9 2.8 1.0
CA A:ASP409 5.0 24.1 1.0

Fluorine binding site 3 out of 4 in 7bsw

Go back to Fluorine Binding Sites List in 7bsw
Fluorine binding site 3 out of 4 in the Cryo-Em Structure of A Human ATP11C-CDC50A Flippase in Ptdetn-Occluded E2-Alf State


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Cryo-Em Structure of A Human ATP11C-CDC50A Flippase in Ptdetn-Occluded E2-Alf State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1101

b:31.2
occ:1.00
 F3 A:ALF1101 0.0 31.2 1.0
AL A:ALF1101 1.8 31.2 1.0
OD1 A:ASP409 2.5 24.1 1.0
F2 A:ALF1101 2.5 31.2 1.0
F1 A:ALF1101 2.5 31.2 1.0
N A:GLY675 2.8 2.9 1.0
CA A:GLY675 3.3 2.9 1.0
CG A:ASP409 3.5 24.1 1.0
C A:THR674 3.5 2.8 1.0
F4 A:ALF1101 3.6 31.2 1.0
OG1 A:THR674 3.7 2.8 1.0
OD2 A:ASP409 3.8 24.1 1.0
CA A:THR674 3.9 2.8 1.0
O A:ASP179 4.0 3.9 1.0
NZ A:LYS795 4.2 2.8 1.0
C A:GLY675 4.3 2.9 1.0
ND2 A:ASN819 4.3 2.8 1.0
CB A:THR674 4.4 2.8 1.0
O A:THR674 4.4 2.8 1.0
N A:ASP676 4.5 3.8 1.0
N A:LYS410 4.5 2.8 1.0
N A:THR411 4.6 2.8 1.0
O A:LEU673 4.9 2.8 1.0
CB A:ASP409 4.9 24.1 1.0
CE A:LYS795 4.9 2.8 1.0
CB A:THR411 5.0 2.8 1.0

Fluorine binding site 4 out of 4 in 7bsw

Go back to Fluorine Binding Sites List in 7bsw
Fluorine binding site 4 out of 4 in the Cryo-Em Structure of A Human ATP11C-CDC50A Flippase in Ptdetn-Occluded E2-Alf State


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Cryo-Em Structure of A Human ATP11C-CDC50A Flippase in Ptdetn-Occluded E2-Alf State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1101

b:31.2
occ:1.00
 F4 A:ALF1101 0.0 31.2 1.0
AL A:ALF1101 1.8 31.2 1.0
OD2 A:ASP409 2.0 24.1 1.0
F1 A:ALF1101 2.5 31.2 1.0
F2 A:ALF1101 2.5 31.2 1.0
OD1 A:ASP816 2.7 2.8 1.0
O A:THR411 2.9 2.8 1.0
CG A:ASP409 3.0 24.1 1.0
OD1 A:ASP409 3.3 24.1 1.0
CG A:ASP816 3.4 2.8 1.0
OD2 A:ASP816 3.5 2.8 1.0
F3 A:ALF1101 3.6 31.2 1.0
C A:THR411 4.0 2.8 1.0
OD1 A:ASN819 4.3 2.8 1.0
CB A:ASP409 4.4 24.1 1.0
ND2 A:ASN819 4.5 2.8 1.0
N A:THR411 4.6 2.8 1.0
N A:GLY817 4.6 2.8 1.0
CA A:THR411 4.7 2.8 1.0
CB A:THR411 4.8 2.8 1.0
O A:GLY180 4.8 3.7 1.0
CG A:ASN819 4.8 2.8 1.0
CB A:ASP816 4.8 2.8 1.0
OD1 A:ASP820 4.8 2.8 1.0
CA A:GLY180 4.9 3.7 1.0
N A:ASP816 5.0 2.8 1.0
OD2 A:ASP820 5.0 2.8 1.0

Reference:

H.Nakanishi, T.Nishizawa, K.Segawa, O.Nureki, Y.Fujiyoshi, S.Nagata, K.Abe. Transport Cycle of Plasma Membrane Flippase ATP11C By Cryo-Em. Cell Rep V. 32 08208 2020.
ISSN: ESSN 2211-1247
PubMed: 32997992
DOI: 10.1016/J.CELREP.2020.108208
Page generated: Sun Dec 13 13:52:00 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy