Fluorine in PDB 7cr2: Human KCNQ2 in Complex with Retigabine
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Human KCNQ2 in Complex with Retigabine
(pdb code 7cr2). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 4 binding sites of Fluorine where determined in the
Human KCNQ2 in Complex with Retigabine, PDB code: 7cr2:
Jump to Fluorine binding site number:
1;
2;
3;
4;
Fluorine binding site 1 out
of 4 in 7cr2
Go back to
Fluorine Binding Sites List in 7cr2
Fluorine binding site 1 out
of 4 in the Human KCNQ2 in Complex with Retigabine
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Human KCNQ2 in Complex with Retigabine within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F801
b:40.7
occ:1.00
|
F1
|
A:FBX801
|
0.0
|
40.7
|
1.0
|
C19
|
A:FBX801
|
1.4
|
40.7
|
1.0
|
C18
|
A:FBX801
|
2.3
|
40.7
|
1.0
|
H14
|
A:FBX801
|
2.5
|
40.7
|
1.0
|
C17
|
A:FBX801
|
2.5
|
40.7
|
1.0
|
H3
|
A:FBX801
|
2.7
|
40.7
|
1.0
|
C15
|
A:FBX801
|
3.7
|
40.7
|
1.0
|
C16
|
A:FBX801
|
3.7
|
40.7
|
1.0
|
C9
|
A:FBX801
|
4.2
|
40.7
|
1.0
|
CZ
|
D:PHE104
|
4.2
|
98.5
|
1.0
|
H13
|
A:FBX801
|
4.4
|
40.7
|
1.0
|
H2
|
A:FBX801
|
4.4
|
40.7
|
1.0
|
CD1
|
B:LEU299
|
4.5
|
39.0
|
1.0
|
CE1
|
D:PHE104
|
4.6
|
98.5
|
1.0
|
CD1
|
A:PHE240
|
4.6
|
39.4
|
1.0
|
CE1
|
A:PHE240
|
4.7
|
39.4
|
1.0
|
|
Fluorine binding site 2 out
of 4 in 7cr2
Go back to
Fluorine Binding Sites List in 7cr2
Fluorine binding site 2 out
of 4 in the Human KCNQ2 in Complex with Retigabine
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Human KCNQ2 in Complex with Retigabine within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F801
b:40.7
occ:1.00
|
F1
|
B:FBX801
|
0.0
|
40.7
|
1.0
|
C19
|
B:FBX801
|
1.4
|
40.7
|
1.0
|
C18
|
B:FBX801
|
2.3
|
40.7
|
1.0
|
H14
|
B:FBX801
|
2.5
|
40.7
|
1.0
|
C17
|
B:FBX801
|
2.5
|
40.7
|
1.0
|
H3
|
B:FBX801
|
2.7
|
40.7
|
1.0
|
C15
|
B:FBX801
|
3.7
|
40.7
|
1.0
|
C16
|
B:FBX801
|
3.7
|
40.7
|
1.0
|
C9
|
B:FBX801
|
4.2
|
40.7
|
1.0
|
CZ
|
A:PHE104
|
4.2
|
99.4
|
1.0
|
H13
|
B:FBX801
|
4.4
|
40.7
|
1.0
|
H2
|
B:FBX801
|
4.4
|
40.7
|
1.0
|
CD1
|
C:LEU299
|
4.5
|
39.4
|
1.0
|
CE1
|
A:PHE104
|
4.6
|
99.4
|
1.0
|
CD1
|
B:PHE240
|
4.6
|
39.1
|
1.0
|
CE1
|
B:PHE240
|
4.7
|
39.1
|
1.0
|
|
Fluorine binding site 3 out
of 4 in 7cr2
Go back to
Fluorine Binding Sites List in 7cr2
Fluorine binding site 3 out
of 4 in the Human KCNQ2 in Complex with Retigabine
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Human KCNQ2 in Complex with Retigabine within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F801
b:40.5
occ:1.00
|
F1
|
C:FBX801
|
0.0
|
40.5
|
1.0
|
C19
|
C:FBX801
|
1.4
|
40.5
|
1.0
|
C18
|
C:FBX801
|
2.3
|
40.5
|
1.0
|
H14
|
C:FBX801
|
2.5
|
40.5
|
1.0
|
C17
|
C:FBX801
|
2.5
|
40.5
|
1.0
|
H3
|
C:FBX801
|
2.7
|
40.5
|
1.0
|
C15
|
C:FBX801
|
3.7
|
40.5
|
1.0
|
C16
|
C:FBX801
|
3.7
|
40.5
|
1.0
|
C9
|
C:FBX801
|
4.2
|
40.5
|
1.0
|
CZ
|
B:PHE104
|
4.2
|
97.7
|
1.0
|
H13
|
C:FBX801
|
4.4
|
40.5
|
1.0
|
H2
|
C:FBX801
|
4.4
|
40.5
|
1.0
|
CD1
|
D:LEU299
|
4.5
|
39.1
|
1.0
|
CD1
|
C:PHE240
|
4.6
|
39.1
|
1.0
|
CE1
|
B:PHE104
|
4.6
|
97.7
|
1.0
|
CE1
|
C:PHE240
|
4.7
|
39.1
|
1.0
|
|
Fluorine binding site 4 out
of 4 in 7cr2
Go back to
Fluorine Binding Sites List in 7cr2
Fluorine binding site 4 out
of 4 in the Human KCNQ2 in Complex with Retigabine
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Human KCNQ2 in Complex with Retigabine within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:F801
b:40.5
occ:1.00
|
F1
|
D:FBX801
|
0.0
|
40.5
|
1.0
|
C19
|
D:FBX801
|
1.4
|
40.5
|
1.0
|
C18
|
D:FBX801
|
2.3
|
40.5
|
1.0
|
H14
|
D:FBX801
|
2.5
|
40.5
|
1.0
|
C17
|
D:FBX801
|
2.5
|
40.5
|
1.0
|
H3
|
D:FBX801
|
2.7
|
40.5
|
1.0
|
C15
|
D:FBX801
|
3.7
|
40.5
|
1.0
|
C16
|
D:FBX801
|
3.7
|
40.5
|
1.0
|
C9
|
D:FBX801
|
4.2
|
40.5
|
1.0
|
CZ
|
C:PHE104
|
4.2
|
97.5
|
1.0
|
H13
|
D:FBX801
|
4.4
|
40.5
|
1.0
|
H2
|
D:FBX801
|
4.4
|
40.5
|
1.0
|
CD1
|
A:LEU299
|
4.5
|
38.9
|
1.0
|
CD1
|
D:PHE240
|
4.6
|
39.1
|
1.0
|
CE1
|
C:PHE104
|
4.6
|
97.5
|
1.0
|
CE1
|
D:PHE240
|
4.7
|
39.1
|
1.0
|
|
Reference:
X.Li,
Q.Zhang,
P.Guo,
J.Fu,
L.Mei,
D.Lv,
J.Wang,
D.Lai,
S.Ye,
H.Yang,
J.Guo.
Molecular Basis For Ligand Activation of the Human KCNQ2 Channel. Cell Res. 2020.
ISSN: ISSN 1001-0602
PubMed: 32884139
DOI: 10.1038/S41422-020-00410-8
Page generated: Fri Aug 2 06:14:20 2024
|