Fluorine in PDB 7cxd: Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group
Protein crystallography data
The structure of Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group, PDB code: 7cxd
was solved by
A.Kumar,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 41.17 / 1.71 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 67.241, 58.712, 70.773, 90, 113.85, 90 |
| R / Rfree (%) | 22.6 / 24.8 |
Other elements in 7cxd:
The structure of Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group also contains other interesting chemical elements:
| Bromine | (Br) | 5 atoms |
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group
(pdb code 7cxd). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 8 binding sites of Fluorine where determined in the Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group, PDB code: 7cxd:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
In total 8 binding sites of Fluorine where determined in the Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group, PDB code: 7cxd:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
Fluorine binding site 1 out of 8 in 7cxd
Go back to
Fluorine Binding Sites List in 7cxd
Fluorine binding site 1 out
of 8 in the Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group within 5.0Å range:
|
Fluorine binding site 2 out of 8 in 7cxd
Go back to
Fluorine Binding Sites List in 7cxd
Fluorine binding site 2 out
of 8 in the Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group within 5.0Å range:
|
Fluorine binding site 3 out of 8 in 7cxd
Go back to
Fluorine Binding Sites List in 7cxd
Fluorine binding site 3 out
of 8 in the Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group within 5.0Å range:
|
Fluorine binding site 4 out of 8 in 7cxd
Go back to
Fluorine Binding Sites List in 7cxd
Fluorine binding site 4 out
of 8 in the Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group within 5.0Å range:
|
Fluorine binding site 5 out of 8 in 7cxd
Go back to
Fluorine Binding Sites List in 7cxd
Fluorine binding site 5 out
of 8 in the Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group within 5.0Å range:
|
Fluorine binding site 6 out of 8 in 7cxd
Go back to
Fluorine Binding Sites List in 7cxd
Fluorine binding site 6 out
of 8 in the Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group within 5.0Å range:
|
Fluorine binding site 7 out of 8 in 7cxd
Go back to
Fluorine Binding Sites List in 7cxd
Fluorine binding site 7 out
of 8 in the Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 7 of Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group within 5.0Å range:
|
Fluorine binding site 8 out of 8 in 7cxd
Go back to
Fluorine Binding Sites List in 7cxd
Fluorine binding site 8 out
of 8 in the Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 8 of Xray Structure of Rat Galectin-3 Crd in Complex with Td-139 Belonging to P121 Space Group within 5.0Å range:
|
Reference:
A.Kumar,
M.Paul,
M.Panda,
S.Jayaram,
N.Kalidindi,
H.Sale,
M.Vetrichelvan,
A.Gupta,
A.Mathur,
B.Beno,
A.Regueiro-Ren,
D.Cheng,
M.Ramarao,
K.Ghosh.
Molecular Mechanism of Interspecies Differences in the Binding Affinity of TD139 to Galectin-3. Glycobiology 2021.
ISSN: ESSN 1460-2423
PubMed: 34228782
DOI: 10.1093/GLYCOB/CWAB072
Page generated: Fri Sep 24 13:20:33 2021
ISSN: ESSN 1460-2423
PubMed: 34228782
DOI: 10.1093/GLYCOB/CWAB072
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