Fluorine in PDB 7d8j: S. Aureus Ssbb with 5-Fu

The structure of S. Aureus Ssbb with 5-Fu, PDB code: 7d8j was solved by E.S.Lin, Y.H.Huang, C.Y.Huang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.34 / 2.88
Space group	P 64 2 2
Cell size a, b, c (Å), α, β, γ (°)	116.366, 116.366, 78.538, 90.00, 90.00, 120.00
R / Rfree (%)	19.4 / 25.7

The binding sites of Fluorine atom in the S. Aureus Ssbb with 5-Fu (pdb code 7d8j). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the S. Aureus Ssbb with 5-Fu, PDB code: 7d8j:

Fluorine binding site 1 out of 1 in the S. Aureus Ssbb with 5-Fu


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of S. Aureus Ssbb with 5-Fu within 5.0Å range: probe atom residue distance (Å) B Occ B:F301 b:75.6 occ:1.00 F5 B:URF301 0.0 75.6 1.0 C5 B:URF301 1.3 85.0 1.0 C6 B:URF301 2.3 81.5 1.0 C4 B:URF301 2.4 84.3 1.0 O4 B:URF301 2.8 73.4 1.0 N3 B:URF301 3.6 82.1 1.0 N1 B:URF301 3.6 73.8 1.0 CG2 B:THR30 4.1 41.7 1.0 C2 B:URF301 4.1 78.3 1.0 CB B:PHE48 4.5 44.2 1.0 OG1 B:THR30 4.5 52.2 1.0 OD1 B:ASN50 4.8 45.0 1.0 CB B:THR30 4.8 43.6 1.0

E.S.Lin, C.Y.Huang. Crystal Structure of the Single-Stranded Dna-Binding Protein Ssbb in Complex with the Anticancer Drug 5-Fluorouracil: Extension of the 5-Fluorouracil Interactome to Include the Oligonucleotide/Oligosaccharide-Binding Fold Protein Biochem.Biophys.Res.Commun. V. 534 41 2020.
ISSN: ESSN 1090-2104
DOI: 10.1016/J.BBRC.2020.11.125