Fluorine in PDB 7e1x: Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47

Enzymatic activity of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47

All present enzymatic activity of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47:
7.1.1.8; 7.1.1.9;

Other elements in 7e1x:

The structure of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 also contains other interesting chemical elements:

Copper (Cu) 8 atoms
Iron (Fe) 16 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 (pdb code 7e1x). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 6 binding sites of Fluorine where determined in the Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47, PDB code: 7e1x:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6;

Fluorine binding site 1 out of 6 in 7e1x

Go back to Fluorine Binding Sites List in 7e1x
Fluorine binding site 1 out of 6 in the Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 within 5.0Å range:
probe atom residue distance (Å) B Occ
N:F609

b:30.0
occ:1.00
 F35 N:HV0609 0.0 30.0 1.0
C34 N:HV0609 1.4 30.0 1.0
F36 N:HV0609 2.2 30.0 1.0
F37 N:HV0609 2.2 30.0 1.0
O33 N:HV0609 2.3 30.0 1.0
C30 N:HV0609 2.6 30.0 1.0
C31 N:HV0609 2.7 30.0 1.0
C29 N:HV0609 3.8 30.0 1.0
C32 N:HV0609 3.8 30.0 1.0
C28 N:HV0609 4.7 30.0 1.0
C27 N:HV0609 4.7 30.0 1.0

Fluorine binding site 2 out of 6 in 7e1x

Go back to Fluorine Binding Sites List in 7e1x
Fluorine binding site 2 out of 6 in the Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 within 5.0Å range:
probe atom residue distance (Å) B Occ
N:F609

b:30.0
occ:1.00
 F36 N:HV0609 0.0 30.0 1.0
C34 N:HV0609 1.4 30.0 1.0
F35 N:HV0609 2.2 30.0 1.0
F37 N:HV0609 2.2 30.0 1.0
O33 N:HV0609 2.3 30.0 1.0
C31 N:HV0609 3.0 30.0 1.0
C30 N:HV0609 3.0 30.0 1.0
CD1 N:LEU194 4.0 60.3 1.0
C32 N:HV0609 4.3 30.0 1.0
C29 N:HV0609 4.4 30.0 1.0
CD2 N:LEU194 4.9 60.3 1.0

Fluorine binding site 3 out of 6 in 7e1x

Go back to Fluorine Binding Sites List in 7e1x
Fluorine binding site 3 out of 6 in the Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 within 5.0Å range:
probe atom residue distance (Å) B Occ
N:F609

b:30.0
occ:1.00
 F37 N:HV0609 0.0 30.0 1.0
C34 N:HV0609 1.4 30.0 1.0
F36 N:HV0609 2.2 30.0 1.0
F35 N:HV0609 2.2 30.0 1.0
O33 N:HV0609 2.2 30.0 1.0
C30 N:HV0609 3.5 30.0 1.0
C31 N:HV0609 4.1 30.0 1.0
C29 N:HV0609 4.5 30.0 1.0
CD1 N:ILE190 4.9 65.0 1.0

Fluorine binding site 4 out of 6 in 7e1x

Go back to Fluorine Binding Sites List in 7e1x
Fluorine binding site 4 out of 6 in the Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F611

b:30.0
occ:1.00
 F35 B:HV0611 0.0 30.0 1.0
C34 B:HV0611 1.4 30.0 1.0
F37 B:HV0611 2.2 30.0 1.0
F36 B:HV0611 2.2 30.0 1.0
O33 B:HV0611 2.3 30.0 1.0
C30 B:HV0611 2.7 30.0 1.0
C29 B:HV0611 2.8 30.0 1.0
C31 B:HV0611 3.8 30.0 1.0
C28 B:HV0611 4.0 30.0 1.0
C41 A:9YF503 4.7 30.0 1.0
C32 B:HV0611 4.7 30.0 1.0
C27 B:HV0611 4.8 30.0 1.0

Fluorine binding site 5 out of 6 in 7e1x

Go back to Fluorine Binding Sites List in 7e1x
Fluorine binding site 5 out of 6 in the Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F611

b:30.0
occ:1.00
 F36 B:HV0611 0.0 30.0 1.0
C34 B:HV0611 1.4 30.0 1.0
F37 B:HV0611 2.2 30.0 1.0
F35 B:HV0611 2.2 30.0 1.0
O33 B:HV0611 2.3 30.0 1.0
C29 B:HV0611 2.7 30.0 1.0
C30 B:HV0611 2.8 30.0 1.0
C41 A:9YF503 3.2 30.0 1.0
CD1 B:LEU194 3.6 56.5 1.0
C40 A:9YF503 3.7 30.0 1.0
C43 A:9YF503 3.7 30.0 1.0
C42 A:9YF503 3.8 30.0 1.0
C28 B:HV0611 4.0 30.0 1.0
C31 B:HV0611 4.2 30.0 1.0
CD2 B:LEU194 4.7 56.5 1.0
CG B:LEU194 4.7 56.5 1.0

Fluorine binding site 6 out of 6 in 7e1x

Go back to Fluorine Binding Sites List in 7e1x
Fluorine binding site 6 out of 6 in the Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 6 of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F611

b:30.0
occ:1.00
 F37 B:HV0611 0.0 30.0 1.0
C34 B:HV0611 1.4 30.0 1.0
F36 B:HV0611 2.2 30.0 1.0
F35 B:HV0611 2.2 30.0 1.0
O33 B:HV0611 2.3 30.0 1.0
C40 A:9YF503 3.5 30.0 1.0
C30 B:HV0611 3.5 30.0 1.0
C41 A:9YF503 3.6 30.0 1.0
CD1 B:ILE190 4.1 60.5 1.0
C29 B:HV0611 4.1 30.0 1.0
CD1 B:LEU194 4.4 56.5 1.0
C31 B:HV0611 4.6 30.0 1.0
C39 A:9YF503 4.7 30.0 1.0
C42 A:9YF503 4.8 30.0 1.0

Reference:

S.Zhou, W.Wang, Y.Gao, H.Gong, Z.Rao. Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 To Be Published.
Page generated: Fri Nov 5 13:11:30 2021

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