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Fluorine in PDB 7gob: Pandda Analysis Group Deposition -- Crystal Structure of Enterovirus D68 3C Protease in Complex with Z1295863442

Enzymatic activity of Pandda Analysis Group Deposition -- Crystal Structure of Enterovirus D68 3C Protease in Complex with Z1295863442

All present enzymatic activity of Pandda Analysis Group Deposition -- Crystal Structure of Enterovirus D68 3C Protease in Complex with Z1295863442:
3.4.22.28;

Protein crystallography data

The structure of Pandda Analysis Group Deposition -- Crystal Structure of Enterovirus D68 3C Protease in Complex with Z1295863442, PDB code: 7gob was solved by R.M.Lithgo, M.Fairhead, L.Koekemoer, J.C.Aschenbrenner, B.H.Balcomb, A.S.Godoy, P.G.Marples, X.Ni, C.W.E.Tomlinson, W.Thompson, C.Wild, D.Fearon, M.A.Walsh, F.Von Delft, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 73.79 / 1.45
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 42.681, 62.275, 147.589, 90, 90, 90
R / Rfree (%) 18.3 / 20

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Pandda Analysis Group Deposition -- Crystal Structure of Enterovirus D68 3C Protease in Complex with Z1295863442 (pdb code 7gob). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Pandda Analysis Group Deposition -- Crystal Structure of Enterovirus D68 3C Protease in Complex with Z1295863442, PDB code: 7gob:

Fluorine binding site 1 out of 1 in 7gob

Go back to Fluorine Binding Sites List in 7gob
Fluorine binding site 1 out of 1 in the Pandda Analysis Group Deposition -- Crystal Structure of Enterovirus D68 3C Protease in Complex with Z1295863442


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Pandda Analysis Group Deposition -- Crystal Structure of Enterovirus D68 3C Protease in Complex with Z1295863442 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F201

b:37.2
occ:0.50
 F B:UR1201 0.0 37.2 0.5
C3 B:UR1201 1.4 35.7 0.5
C4 B:UR1201 2.3 35.6 0.5
C2 B:UR1201 2.3 36.0 0.5
O B:GLY1 3.2 31.2 0.5
C5 B:UR1201 3.6 34.5 0.5
C1 B:UR1201 3.6 35.2 0.5
CB B:PHE4 3.7 20.4 0.5
N B:PHE4 3.7 19.5 0.5
CE1 A:PHE109 3.9 43.8 1.0
C B:GLY1 4.0 30.0 0.5
C6 B:UR1201 4.1 35.2 0.5
NH1 A:ARG143 4.1 48.5 0.5
N B:GLY1 4.1 29.0 0.5
O B:HOH422 4.2 22.5 0.5
CA B:PHE4 4.3 19.5 0.5
N B:GLY3 4.4 22.3 0.5
CA B:GLY1 4.5 29.2 0.5
CZ A:PHE109 4.6 46.2 1.0
C B:GLY3 4.7 20.3 0.5
CA B:GLY3 4.8 20.6 0.5
CG B:PHE4 4.8 20.5 0.5
C B:UR1201 4.9 35.2 0.5
CD1 A:PHE109 4.9 40.9 1.0
N B:PRO2 4.9 26.7 0.5

Reference:

R.M.Lithgo, M.Fairhead, L.Koekemoer, J.C.Aschenbrenner, B.H.Balcomb, A.S.Godoy, P.G.Marples, X.Ni, C.W.E.Tomlinson, W.Thompson, C.Wild, D.Fearon, M.A.Walsh, F.Von Delft. Pandda Analysis Group Deposition To Be Published.
Page generated: Thu Dec 28 04:15:45 2023

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