Atomistry » Fluorine » PDB 7giu-7grv » 7gpi
Atomistry »
  Fluorine »
    PDB 7giu-7grv »
      7gpi »

Fluorine in PDB 7gpi: Pandda Analysis Group Deposition -- Crystal Structure of Enterovirus D68 3C Protease in Complex with Z839157334

Enzymatic activity of Pandda Analysis Group Deposition -- Crystal Structure of Enterovirus D68 3C Protease in Complex with Z839157334

All present enzymatic activity of Pandda Analysis Group Deposition -- Crystal Structure of Enterovirus D68 3C Protease in Complex with Z839157334:
3.4.22.28;

Protein crystallography data

The structure of Pandda Analysis Group Deposition -- Crystal Structure of Enterovirus D68 3C Protease in Complex with Z839157334, PDB code: 7gpi was solved by R.M.Lithgo, M.Fairhead, L.Koekemoer, J.C.Aschenbrenner, B.H.Balcomb, A.S.Godoy, P.G.Marples, X.Ni, C.W.E.Tomlinson, W.Thompson, C.Wild, D.Fearon, M.A.Walsh, F.Von Delft, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 73.68 / 1.30
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 42.802, 62.317, 147.363, 90, 90, 90
R / Rfree (%) 19.9 / 20.8

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Pandda Analysis Group Deposition -- Crystal Structure of Enterovirus D68 3C Protease in Complex with Z839157334 (pdb code 7gpi). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Pandda Analysis Group Deposition -- Crystal Structure of Enterovirus D68 3C Protease in Complex with Z839157334, PDB code: 7gpi:

Fluorine binding site 1 out of 1 in 7gpi

Go back to Fluorine Binding Sites List in 7gpi
Fluorine binding site 1 out of 1 in the Pandda Analysis Group Deposition -- Crystal Structure of Enterovirus D68 3C Protease in Complex with Z839157334


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Pandda Analysis Group Deposition -- Crystal Structure of Enterovirus D68 3C Protease in Complex with Z839157334 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F201

b:61.3
occ:0.54
 F B:TWR201 0.0 61.3 0.5
C8 B:TWR201 1.3 69.0 0.5
C7 B:TWR201 2.3 69.2 0.5
C9 B:TWR201 2.4 70.8 0.5
N1 B:TWR201 2.7 74.7 0.5
O B:ARG19 3.0 19.5 0.5
O B:ILE46 3.0 19.9 1.0
CA B:ILE47 3.5 19.3 1.0
O B:HOH378 3.5 18.4 1.0
CA B:THR20 3.5 20.0 1.0
C6 B:TWR201 3.6 68.7 0.5
C4 B:TWR201 3.6 69.9 0.5
CD1 B:TYR48 3.7 29.2 1.0
C B:ILE46 3.8 19.4 1.0
C B:ARG19 3.9 19.2 0.5
C B:THR20 3.9 23.8 1.0
N B:TYR48 3.9 21.4 1.0
CE1 B:TYR48 4.0 32.0 1.0
C B:ILE47 4.0 20.8 1.0
N B:ILE47 4.0 18.9 1.0
C5 B:TWR201 4.1 68.5 0.5
N B:THR20 4.1 18.9 1.0
N B:GLU21 4.2 28.1 0.5
O B:HOH405 4.3 23.9 1.0
CB B:ILE47 4.5 19.4 1.0
CG1 B:ILE47 4.6 19.9 1.0
O B:THR20 4.6 22.1 1.0
CB B:THR20 4.7 18.8 1.0
O1 B:TWR201 4.8 69.0 0.5
CG B:TYR48 4.8 26.1 1.0

Reference:

R.M.Lithgo, M.Fairhead, L.Koekemoer, J.C.Aschenbrenner, B.H.Balcomb, A.S.Godoy, P.G.Marples, X.Ni, C.W.E.Tomlinson, W.Thompson, C.Wild, D.Fearon, M.A.Walsh, F.Von Delft. Pandda Analysis Group Deposition To Be Published.
Page generated: Fri Aug 2 07:43:21 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy