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Fluorine in PDB 7hlr: Pandda Analysis Group Deposition -- Crystal Structure of TRIM21 in Complex with Z1430613393

Enzymatic activity of Pandda Analysis Group Deposition -- Crystal Structure of TRIM21 in Complex with Z1430613393

All present enzymatic activity of Pandda Analysis Group Deposition -- Crystal Structure of TRIM21 in Complex with Z1430613393:
2.3.2.27;

Protein crystallography data

The structure of Pandda Analysis Group Deposition -- Crystal Structure of TRIM21 in Complex with Z1430613393, PDB code: 7hlr was solved by Y.Kim, P.Marples, D.Fearon, F.Von Delft, S.Knapp, A.Kraemer, Structuralgenomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 67.58 / 1.34
Space group I 4
Cell size a, b, c (Å), α, β, γ (°) 95.569, 95.569, 45.813, 90, 90, 90
R / Rfree (%) 18 / 20

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Pandda Analysis Group Deposition -- Crystal Structure of TRIM21 in Complex with Z1430613393 (pdb code 7hlr). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Pandda Analysis Group Deposition -- Crystal Structure of TRIM21 in Complex with Z1430613393, PDB code: 7hlr:

Fluorine binding site 1 out of 1 in 7hlr

Go back to Fluorine Binding Sites List in 7hlr
Fluorine binding site 1 out of 1 in the Pandda Analysis Group Deposition -- Crystal Structure of TRIM21 in Complex with Z1430613393


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Pandda Analysis Group Deposition -- Crystal Structure of TRIM21 in Complex with Z1430613393 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F202

b:34.0
occ:0.62
 F1 B:LKU202 0.0 34.0 0.6
C11 B:LKU202 1.4 29.0 0.6
C10 B:LKU202 2.3 28.4 0.6
C12 B:LKU202 2.4 29.9 0.6
O B:HOH419 3.5 22.3 1.0
O B:ASP48 3.6 20.3 1.0
C9 B:LKU202 3.6 28.3 0.6
CB B:ASP48 3.6 21.4 1.0
C7 B:LKU202 3.6 28.4 0.6
C B:ASP48 3.9 21.2 1.0
C8 B:LKU202 4.1 29.9 0.6
CA B:ASP48 4.2 19.3 1.0
OD2 B:ASP48 4.2 27.4 1.0
CG B:ASP48 4.4 23.5 1.0
N B:ASP48 4.5 19.0 1.0
N B:ASN49 4.7 19.5 1.0
C6 B:LKU202 4.9 28.8 0.6

Reference:

Y.Kim, P.Marples, D.Fearon, F.Von Delft, S.Knapp, A.Kraemer, Structural Genomics Consortium (Sgc). Pandda Analysis Group Deposition To Be Published.
Page generated: Tue Dec 10 19:51:11 2024

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