Atomistry » Fluorine » PDB 7ryx-7sj3 » 7si3
Atomistry »
  Fluorine »
    PDB 7ryx-7sj3 »
      7si3 »

Fluorine in PDB 7si3: Consensus Structure of ATP7B

Enzymatic activity of Consensus Structure of ATP7B

All present enzymatic activity of Consensus Structure of ATP7B:
7.2.2.8;

Other elements in 7si3:

The structure of Consensus Structure of ATP7B also contains other interesting chemical elements:

Magnesium (Mg) 1 atom
Aluminium (Al) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Consensus Structure of ATP7B (pdb code 7si3). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 4 binding sites of Fluorine where determined in the Consensus Structure of ATP7B, PDB code: 7si3:
Jump to Fluorine binding site number: 1; 2; 3; 4;

Fluorine binding site 1 out of 4 in 7si3

Go back to Fluorine Binding Sites List in 7si3
Fluorine binding site 1 out of 4 in the Consensus Structure of ATP7B


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Consensus Structure of ATP7B within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1502

b:40.4
occ:1.00
F1 A:ALF1502 0.0 40.4 1.0
AL A:ALF1502 1.8 40.4 1.0
HZ1 A:LYS1254 1.8 43.2 1.0
HD21 A:ASN1276 1.9 43.6 1.0
F4 A:ALF1502 2.5 40.4 1.0
F3 A:ALF1502 2.5 40.4 1.0
ND2 A:ASN1276 2.6 43.6 1.0
NZ A:LYS1254 2.6 43.2 1.0
HZ2 A:LYS1254 2.7 43.2 1.0
HD22 A:ASN1276 2.7 43.6 1.0
OD1 A:ASP1024 2.8 42.8 1.0
H A:GLY1227 3.0 41.5 1.0
HE3 A:LYS1254 3.1 43.2 1.0
HA A:THR1226 3.2 47.1 1.0
HZ3 A:LYS1254 3.3 43.2 1.0
CE A:LYS1254 3.4 43.2 1.0
OD1 A:ASP1277 3.5 43.6 1.0
F2 A:ALF1502 3.6 40.4 1.0
HE2 A:LYS1254 3.6 43.2 1.0
CG A:ASP1024 3.6 42.8 1.0
HG1 A:THR1226 3.7 47.1 1.0
N A:GLY1227 3.7 41.5 1.0
CG A:ASN1276 3.8 43.6 1.0
O A:THR855 3.9 46.4 1.0
OD2 A:ASP1024 4.0 42.8 1.0
CA A:THR1226 4.1 47.1 1.0
HA3 A:GLY856 4.1 48.8 1.0
OD1 A:ASN1276 4.2 43.6 1.0
HA3 A:GLY1227 4.2 41.5 1.0
C A:THR1226 4.3 47.1 1.0
OG1 A:THR1226 4.3 47.1 1.0
CG A:ASP1277 4.3 43.6 1.0
OD2 A:ASP1277 4.4 43.6 1.0
CA A:GLY1227 4.6 41.5 1.0
HB2 A:ASP1024 4.7 42.8 1.0
CD A:LYS1254 4.7 43.2 1.0
O A:ILE1225 4.8 43.9 1.0
HB2 A:ASN1276 4.8 43.6 1.0
CB A:THR1226 4.8 47.1 1.0
CB A:ASP1024 4.8 42.8 1.0
C A:THR855 4.9 46.4 1.0
H A:LYS1025 4.9 48.4 1.0
HD2 A:LYS1254 4.9 43.2 1.0
CB A:ASN1276 5.0 43.6 1.0

Fluorine binding site 2 out of 4 in 7si3

Go back to Fluorine Binding Sites List in 7si3
Fluorine binding site 2 out of 4 in the Consensus Structure of ATP7B


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Consensus Structure of ATP7B within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1502

b:40.4
occ:1.00
F2 A:ALF1502 0.0 40.4 1.0
AL A:ALF1502 1.8 40.4 1.0
MG A:MG1501 2.0 43.6 1.0
OG1 A:THR1026 2.1 43.2 1.0
OD2 A:ASP1024 2.2 42.8 1.0
F3 A:ALF1502 2.5 40.4 1.0
F4 A:ALF1502 2.5 40.4 1.0
CG A:ASP1024 3.1 42.8 1.0
OD1 A:ASP1024 3.2 42.8 1.0
H A:THR1026 3.3 43.2 1.0
O A:THR1026 3.4 43.2 1.0
CB A:THR1026 3.5 43.2 1.0
F1 A:ALF1502 3.6 40.4 1.0
HA3 A:GLY856 3.7 48.8 1.0
N A:THR1026 3.9 43.2 1.0
HB A:THR1026 4.0 43.2 1.0
OD1 A:ASP1273 4.0 31.6 1.0
HD21 A:ASN1276 4.0 43.6 1.0
CA A:THR1026 4.0 43.2 1.0
O A:GLY856 4.1 48.8 1.0
C A:THR1026 4.1 43.2 1.0
HG1 A:THR1226 4.1 47.1 1.0
HG23 A:THR1026 4.3 43.2 1.0
C A:GLY856 4.4 48.8 1.0
CA A:GLY856 4.4 48.8 1.0
CG2 A:THR1026 4.5 43.2 1.0
H A:LYS1025 4.5 48.4 1.0
OD2 A:ASP1277 4.5 43.6 1.0
CB A:ASP1024 4.5 42.8 1.0
HG21 A:THR1026 4.6 43.2 1.0
HB3 A:ASP1024 4.7 42.8 1.0
HA2 A:GLY856 4.8 48.8 1.0
HA3 A:GLY1274 4.8 37.1 1.0
ND2 A:ASN1276 4.9 43.6 1.0
O A:THR855 4.9 46.4 1.0
OG1 A:THR1226 4.9 47.1 1.0
N A:LYS1025 4.9 48.4 1.0
H A:GLY1274 4.9 37.1 1.0
HB2 A:ASP1024 4.9 42.8 1.0
HZ1 A:LYS1254 5.0 43.2 1.0
HA A:THR1026 5.0 43.2 1.0
OD1 A:ASN1276 5.0 43.6 1.0

Fluorine binding site 3 out of 4 in 7si3

Go back to Fluorine Binding Sites List in 7si3
Fluorine binding site 3 out of 4 in the Consensus Structure of ATP7B


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Consensus Structure of ATP7B within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1502

b:40.4
occ:1.00
F3 A:ALF1502 0.0 40.4 1.0
AL A:ALF1502 1.8 40.4 1.0
HD21 A:ASN1276 2.2 43.6 1.0
F2 A:ALF1502 2.5 40.4 1.0
F1 A:ALF1502 2.5 40.4 1.0
OD2 A:ASP1277 2.7 43.6 1.0
OD1 A:ASN1276 2.8 43.6 1.0
ND2 A:ASN1276 2.9 43.6 1.0
OD2 A:ASP1024 3.0 42.8 1.0
OD1 A:ASP1277 3.2 43.6 1.0
CG A:ASN1276 3.2 43.6 1.0
CG A:ASP1277 3.2 43.6 1.0
MG A:MG1501 3.3 43.6 1.0
CG A:ASP1024 3.4 42.8 1.0
OD1 A:ASP1024 3.5 42.8 1.0
HA3 A:GLY856 3.5 48.8 1.0
HA3 A:GLY1274 3.5 37.1 1.0
F4 A:ALF1502 3.6 40.4 1.0
HD22 A:ASN1276 3.6 43.6 1.0
H A:GLY1274 3.6 37.1 1.0
HZ2 A:LYS1254 3.7 43.2 1.0
HZ1 A:LYS1254 3.7 43.2 1.0
NZ A:LYS1254 4.1 43.2 1.0
H A:ASP1277 4.3 43.6 1.0
N A:GLY1274 4.3 37.1 1.0
CA A:GLY1274 4.3 37.1 1.0
OD1 A:ASP1273 4.3 31.6 1.0
CA A:GLY856 4.4 48.8 1.0
HA2 A:GLY856 4.4 48.8 1.0
H A:ASP1273 4.5 31.6 1.0
HB2 A:ASP1024 4.5 42.8 1.0
CB A:ASP1277 4.6 43.6 1.0
CB A:ASP1024 4.6 42.8 1.0
OG1 A:THR1026 4.6 43.2 1.0
N A:ASP1277 4.7 43.6 1.0
CB A:ASN1276 4.7 43.6 1.0
HB2 A:ASP1277 4.7 43.6 1.0
HZ3 A:LYS1254 4.7 43.2 1.0
HE3 A:LYS1254 4.7 43.2 1.0
O A:THR855 4.7 46.4 1.0
H A:ASN1276 4.7 43.6 1.0
HB3 A:ASP1024 4.9 42.8 1.0
C A:GLY1274 4.9 37.1 1.0
HA2 A:GLY1274 5.0 37.1 1.0
HB2 A:ASN1276 5.0 43.6 1.0

Fluorine binding site 4 out of 4 in 7si3

Go back to Fluorine Binding Sites List in 7si3
Fluorine binding site 4 out of 4 in the Consensus Structure of ATP7B


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Consensus Structure of ATP7B within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1502

b:40.4
occ:1.00
F4 A:ALF1502 0.0 40.4 1.0
AL A:ALF1502 1.8 40.4 1.0
HG1 A:THR1226 1.8 47.1 1.0
OD1 A:ASP1024 2.5 42.8 1.0
F1 A:ALF1502 2.5 40.4 1.0
F2 A:ALF1502 2.5 40.4 1.0
OG1 A:THR1226 2.6 47.1 1.0
H A:GLY1227 2.7 41.5 1.0
HA A:THR1226 3.2 47.1 1.0
H A:THR1026 3.3 43.2 1.0
OG1 A:THR1026 3.3 43.2 1.0
CG A:ASP1024 3.3 42.8 1.0
OD2 A:ASP1024 3.4 42.8 1.0
H A:LYS1025 3.5 48.4 1.0
N A:GLY1227 3.6 41.5 1.0
F3 A:ALF1502 3.6 40.4 1.0
CB A:THR1226 3.6 47.1 1.0
HZ1 A:LYS1254 3.8 43.2 1.0
CA A:THR1226 3.8 47.1 1.0
HB3 A:LYS1025 3.8 48.4 1.0
HB A:THR1226 3.9 47.1 1.0
HD21 A:ASN1276 3.9 43.6 1.0
HG23 A:THR1026 4.0 43.2 1.0
O A:THR855 4.1 46.4 1.0
N A:THR1026 4.1 43.2 1.0
OE2 A:GLU857 4.1 58.0 1.0
C A:THR1226 4.2 47.1 1.0
N A:LYS1025 4.3 48.4 1.0
HA3 A:GLY856 4.3 48.8 1.0
H A:ASP1228 4.3 50.6 1.0
MG A:MG1501 4.4 43.6 1.0
CB A:THR1026 4.4 43.2 1.0
HA3 A:GLY1227 4.5 41.5 1.0
CA A:GLY1227 4.6 41.5 1.0
CG2 A:THR1026 4.6 43.2 1.0
CB A:LYS1025 4.6 48.4 1.0
NZ A:LYS1254 4.6 43.2 1.0
HE3 A:LYS1025 4.7 48.4 1.0
ND2 A:ASN1276 4.7 43.6 1.0
CB A:ASP1024 4.8 42.8 1.0
CD A:GLU857 4.8 58.0 1.0
HB2 A:ASP1228 4.8 50.6 1.0
N A:ASP1228 4.8 50.6 1.0
HB2 A:LYS1025 4.8 48.4 1.0
HG21 A:THR1026 4.8 43.2 1.0
HA A:ASP1024 4.8 42.8 1.0
HZ2 A:LYS1254 4.8 43.2 1.0
CA A:LYS1025 4.9 48.4 1.0
CA A:THR1026 4.9 43.2 1.0
HG3 A:GLU857 4.9 58.0 1.0
O A:ILE1225 4.9 43.9 1.0
CG2 A:THR1226 4.9 47.1 1.0
HZ3 A:LYS1254 4.9 43.2 1.0
HD22 A:ASN1276 5.0 43.6 1.0
HG23 A:THR1226 5.0 47.1 1.0
C A:LYS1025 5.0 48.4 1.0

Reference:

R.M.Bitter, S.Oh, Z.Deng, S.Rahman, R.K.Hite, P.Yuan. Structure of the Wilson Disease Copper Transporter ATP7B. Sci Adv V. 8 L5508 2022.
ISSN: ESSN 2375-2548
PubMed: 35245129
DOI: 10.1126/SCIADV.ABL5508
Page generated: Wed Jul 16 00:09:19 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy