Fluorine in PDB 7x3t: Cryo-Em Structure of ISW1A-Dinucleosome

The structure of Cryo-Em Structure of ISW1A-Dinucleosome also contains other interesting chemical elements:

Magnesium

(Mg)

1 atom

The binding sites of Fluorine atom in the Cryo-Em Structure of ISW1A-Dinucleosome (pdb code 7x3t). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 3 binding sites of Fluorine where determined in the Cryo-Em Structure of ISW1A-Dinucleosome, PDB code: 7x3t:
Jump to Fluorine binding site number: 1; 2; 3;

Fluorine binding site 1 out of 3 in the Cryo-Em Structure of ISW1A-Dinucleosome


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Cryo-Em Structure of ISW1A-Dinucleosome within 5.0Å range: probe atom residue distance (Å) B Occ V:F1202 b:1000.0 occ:1.00 F1 V:BEF1202 0.0 1000.0 1.0 BE V:BEF1202 1.7 1000.0 1.0 F3 V:BEF1202 2.6 1000.0 1.0 F2 V:BEF1202 2.8 1000.0 1.0 OE2 V:GLU325 2.9 1000.0 1.0 NZ V:LYS227 3.2 1000.0 1.0 CA V:GLY584 3.4 1000.0 1.0 CD V:GLU325 3.8 1000.0 1.0 O2B V:ADP1201 3.9 1000.0 1.0 CE V:LYS227 4.0 1000.0 1.0 N V:GLY584 4.2 1000.0 1.0 CG V:GLU325 4.2 1000.0 1.0 NH2 V:ARG614 4.2 1000.0 1.0 O V:GLY584 4.3 1000.0 1.0 C V:GLY584 4.4 1000.0 1.0 OD2 V:ASP324 4.4 1000.0 1.0 OE1 V:GLN607 4.4 1000.0 1.0 OD1 V:ASP324 4.5 1000.0 1.0 O V:LEU583 4.6 1000.0 1.0 C V:LEU583 4.6 1000.0 1.0 O1B V:ADP1201 4.6 1000.0 1.0 PB V:ADP1201 4.6 1000.0 1.0 CB V:MET223 4.8 1000.0 1.0 OE1 V:GLU325 4.8 1000.0 1.0 NH1 V:ARG611 4.8 1000.0 1.0 CG V:ASP324 4.9 1000.0 1.0 CA V:GLY353 4.9 1000.0 1.0

Fluorine binding site 2 out of 3 in the Cryo-Em Structure of ISW1A-Dinucleosome


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Cryo-Em Structure of ISW1A-Dinucleosome within 5.0Å range: probe atom residue distance (Å) B Occ V:F1202 b:1000.0 occ:1.00 F2 V:BEF1202 0.0 1000.0 1.0 BE V:BEF1202 1.7 1000.0 1.0 NH2 V:ARG614 2.4 1000.0 1.0 NZ V:LYS227 2.6 1000.0 1.0 O1B V:ADP1201 2.6 1000.0 1.0 F3 V:BEF1202 2.7 1000.0 1.0 N V:GLY224 2.7 1000.0 1.0 F1 V:BEF1202 2.8 1000.0 1.0 O2B V:ADP1201 2.9 1000.0 1.0 CB V:MET223 3.2 1000.0 1.0 PB V:ADP1201 3.2 1000.0 1.0 CA V:MET223 3.4 1000.0 1.0 C V:MET223 3.5 1000.0 1.0 CA V:GLY224 3.7 1000.0 1.0 CZ V:ARG614 3.7 1000.0 1.0 CE V:LYS227 4.1 1000.0 1.0 O3A V:ADP1201 4.3 1000.0 1.0 CG V:MET223 4.3 1000.0 1.0 O3B V:ADP1201 4.4 1000.0 1.0 CD V:ARG614 4.5 1000.0 1.0 NH1 V:ARG614 4.5 1000.0 1.0 NE V:ARG614 4.5 1000.0 1.0 O V:MET223 4.6 1000.0 1.0 NH1 V:ARG611 4.7 1000.0 1.0 N V:MET223 4.8 1000.0 1.0 C V:GLY224 4.9 1000.0 1.0 CD V:LYS227 4.9 1000.0 1.0

Fluorine binding site 3 out of 3 in the Cryo-Em Structure of ISW1A-Dinucleosome


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Cryo-Em Structure of ISW1A-Dinucleosome within 5.0Å range: probe atom residue distance (Å) B Occ V:F1202 b:1000.0 occ:1.00 F3 V:BEF1202 0.0 1000.0 1.0 BE V:BEF1202 1.7 1000.0 1.0 O2B V:ADP1201 2.1 1000.0 1.0 NH2 V:ARG614 2.3 1000.0 1.0 O V:GLY584 2.4 1000.0 1.0 F1 V:BEF1202 2.6 1000.0 1.0 F2 V:BEF1202 2.7 1000.0 1.0 C V:GLY584 3.1 1000.0 1.0 CA V:GLY584 3.1 1000.0 1.0 CZ V:ARG614 3.2 1000.0 1.0 NH1 V:ARG614 3.4 1000.0 1.0 PB V:ADP1201 3.5 1000.0 1.0 O1B V:ADP1201 4.0 1000.0 1.0 NZ V:LYS227 4.1 1000.0 1.0 N V:ILE585 4.3 1000.0 1.0 O3B V:ADP1201 4.3 1000.0 1.0 NE V:ARG614 4.3 1000.0 1.0 N V:GLY584 4.3 1000.0 1.0 O3A V:ADP1201 4.5 1000.0 1.0 NH1 V:ARG611 4.6 1000.0 1.0 O2A V:ADP1201 4.6 1000.0 1.0 O V:ILE585 4.6 1000.0 1.0 C V:ILE585 4.8 1000.0 1.0 CD V:ARG614 4.9 1000.0 1.0 CA V:ILE585 5.0 1000.0 1.0

C.Zhucheng, L.Lifei, C.Kangjing. ISW1A-Dinucleosome To Be Published.