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Fluorine in PDB 7xkj: Kras-G12D-Gdp-MRXT1133 By Fib-Microed

Other elements in 7xkj:

The structure of Kras-G12D-Gdp-MRXT1133 By Fib-Microed also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Kras-G12D-Gdp-MRXT1133 By Fib-Microed (pdb code 7xkj). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 3 binding sites of Fluorine where determined in the Kras-G12D-Gdp-MRXT1133 By Fib-Microed, PDB code: 7xkj:
Jump to Fluorine binding site number: 1; 2; 3;

Fluorine binding site 1 out of 3 in 7xkj

Go back to Fluorine Binding Sites List in 7xkj
Fluorine binding site 1 out of 3 in the Kras-G12D-Gdp-MRXT1133 By Fib-Microed


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Kras-G12D-Gdp-MRXT1133 By Fib-Microed within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F202

b:21.3
occ:1.00
F01 A:6IC202 0.0 21.3 1.0
C07 A:6IC202 1.4 19.7 1.0
C06 A:6IC202 2.1 21.1 1.0
C08 A:6IC202 2.5 17.9 1.0
C02 A:6IC202 2.5 22.4 1.0
CE1 A:TYR64 3.0 23.9 1.0
C20 A:6IC202 3.0 16.1 1.0
C32 A:6IC202 3.1 18.1 1.0
N01 A:6IC202 3.1 20.6 1.0
OH A:TYR64 3.1 21.1 1.0
CZ A:TYR64 3.3 19.3 1.0
C16 A:6IC202 3.3 21.8 1.0
C24 A:6IC202 3.3 19.5 1.0
C33 A:6IC202 3.3 22.2 1.0
N03 A:6IC202 3.4 22.8 1.0
CG A:GLN99 3.4 21.2 1.0
C01 A:6IC202 3.7 29.3 1.0
NE2 A:HIS95 3.8 20.6 1.0
CD1 A:TYR64 4.0 24.0 1.0
CB A:GLN99 4.0 28.4 1.0
C05 A:6IC202 4.0 24.9 1.0
C19 A:6IC202 4.1 23.1 1.0
C17 A:6IC202 4.3 28.2 1.0
CD A:GLN99 4.3 26.0 1.0
CE1 A:HIS95 4.4 24.7 1.0
CE2 A:TYR64 4.4 16.1 1.0
C03 A:6IC202 4.4 17.5 1.0
C23 A:6IC202 4.5 26.6 1.0
OE1 A:GLN99 4.6 29.1 1.0
C18 A:6IC202 4.7 27.6 1.0
O01 A:6IC202 4.7 23.4 1.0
CD2 A:HIS95 4.8 18.6 1.0
C04 A:6IC202 4.9 28.6 1.0
CE1 A:TYR96 5.0 10.1 1.0
CD1 A:TYR96 5.0 18.7 1.0
CG A:TYR64 5.0 29.7 1.0

Fluorine binding site 2 out of 3 in 7xkj

Go back to Fluorine Binding Sites List in 7xkj
Fluorine binding site 2 out of 3 in the Kras-G12D-Gdp-MRXT1133 By Fib-Microed


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Kras-G12D-Gdp-MRXT1133 By Fib-Microed within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F202

b:24.8
occ:1.00
F02 A:6IC202 0.0 24.8 1.0
C27 A:6IC202 1.4 28.3 1.0
C26 A:6IC202 2.1 32.0 1.0
C28 A:6IC202 2.6 20.9 1.0
C25 A:6IC202 3.2 34.6 1.0
N06 A:6IC202 3.3 19.3 1.0
C29 A:6IC202 3.6 22.0 1.0
C31 A:6IC202 3.7 21.9 1.0
C30 A:6IC202 4.2 18.8 1.0
CG A:HIS95 4.2 20.5 1.0
ND1 A:HIS95 4.2 23.9 1.0
CB A:HIS95 4.4 25.1 1.0
OD1 A:ASP92 4.5 33.6 1.0
C09 A:6IC202 4.6 21.5 1.0
CD2 A:HIS95 4.6 18.6 1.0
CE1 A:HIS95 4.6 24.7 1.0
NE2 A:HIS95 4.8 20.6 1.0

Fluorine binding site 3 out of 3 in 7xkj

Go back to Fluorine Binding Sites List in 7xkj
Fluorine binding site 3 out of 3 in the Kras-G12D-Gdp-MRXT1133 By Fib-Microed


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Kras-G12D-Gdp-MRXT1133 By Fib-Microed within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F202

b:17.4
occ:1.00
F23 A:6IC202 0.0 17.4 1.0
C23 A:6IC202 1.4 26.6 1.0
C22 A:6IC202 2.4 26.7 1.0
C24 A:6IC202 2.5 19.5 1.0
C32 A:6IC202 2.8 18.1 1.0
CG1 A:VAL9 3.4 20.0 1.0
CG1 A:ILE100 3.4 29.3 1.0
C33 A:6IC202 3.6 22.2 1.0
C21 A:6IC202 3.6 21.0 1.0
C20 A:6IC202 3.8 16.1 1.0
CD1 A:ILE100 4.0 14.2 1.0
CE2 A:PHE78 4.0 17.6 1.0
O A:TYR96 4.0 35.2 1.0
CD2 A:PHE78 4.2 19.0 1.0
CB A:VAL9 4.2 12.1 1.0
C19 A:6IC202 4.2 23.1 1.0
CB A:GLN99 4.3 28.4 1.0
N A:ILE100 4.4 29.2 1.0
CG2 A:VAL9 4.5 10.1 1.0
SD A:MET72 4.5 24.3 1.0
CB A:ILE100 4.7 29.1 1.0
C A:GLN99 4.7 30.4 1.0
CA A:ILE100 4.7 28.8 1.0
CE A:MET72 4.8 17.9 1.0
C A:TYR96 4.9 30.3 1.0
CZ A:PHE78 5.0 18.6 1.0
CA A:TYR96 5.0 20.9 1.0

Reference:

X.M.Li, X.M.Li. N/A N/A.
Page generated: Wed Jul 16 01:58:20 2025

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