Fluorine in PDB 8eff: Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane

The structure of Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane also contains other interesting chemical elements:

Magnesium	(Mg)	4 atoms
Potassium	(K)	4 atoms
Aluminium	(Al)	4 atoms

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 16;

Binding sites:

The binding sites of Fluorine atom in the Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane (pdb code 8eff). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 16 binding sites of Fluorine where determined in the Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane, PDB code: 8eff:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Fluorine binding site 1 out of 16 in the Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane within 5.0Å range: probe atom residue distance (Å) B Occ A:F1002 b:15.2 occ:1.00 F1 A:ALF1002 0.0 15.2 1.0 AL A:ALF1002 1.8 14.3 1.0 H A:MET322 2.0 24.4 1.0 H A:THR323 2.5 25.9 1.0 F4 A:ALF1002 2.5 16.1 1.0 F3 A:ALF1002 2.5 15.9 1.0 HG3 A:MET321 2.6 31.7 1.0 N A:MET322 2.8 24.4 1.0 HA A:MET321 2.9 26.7 1.0 HE21 A:GLN297 3.0 121.5 1.0 HG2 A:GLN297 3.1 121.5 1.0 N A:THR323 3.2 25.9 1.0 HG2 A:MET321 3.2 31.7 1.0 HB2 A:MET322 3.3 33.6 1.0 CG A:MET321 3.3 31.7 1.0 HG1 A:THR323 3.5 32.5 1.0 C A:MET321 3.6 29.2 1.0 F2 A:ALF1002 3.6 15.3 1.0 CA A:MET321 3.6 26.7 1.0 HB A:THR323 3.6 32.5 1.0 CA A:MET322 3.6 22.5 1.0 NE2 A:GLN297 3.7 121.5 1.0 C A:MET322 3.8 27.9 1.0 CG A:GLN297 3.9 121.5 1.0 CB A:MET322 3.9 33.6 1.0 HG3 A:GLN297 4.0 121.5 1.0 MG A:MG1003 4.0 7.9 1.0 CB A:MET321 4.0 31.7 1.0 OG1 A:THR323 4.0 32.5 1.0 O3B A:GDP1001 4.1 9.7 1.0 CB A:THR323 4.1 32.5 1.0 CA A:THR323 4.2 22.2 1.0 H A:GLY401 4.2 89.2 1.0 HE22 A:GLN297 4.2 121.5 1.0 CD A:GLN297 4.2 121.5 1.0 O A:THR323 4.3 24.9 1.0 HB2 A:MET321 4.3 31.7 1.0 HG2 A:MET322 4.4 33.6 1.0 HA A:MET322 4.5 22.5 1.0 O2B A:GDP1001 4.5 6.3 1.0 HB3 A:MET322 4.7 33.6 1.0 O A:MET321 4.7 28.9 1.0 PB A:GDP1001 4.7 7.8 1.0 C A:THR323 4.7 23.8 1.0 CG A:MET322 4.7 33.6 1.0 O1B A:GDP1001 4.8 7.1 1.0 HA3 A:GLY401 4.8 89.2 1.0 HB3 A:MET321 4.8 31.7 1.0 O A:GLU320 4.8 30.1 1.0 HZ2 A:LYS301 4.8 134.2 1.0 SD A:MET321 4.8 31.7 1.0 N A:MET321 4.9 23.7 1.0 HE2 A:MET321 4.9 31.7 1.0 HA A:GLN297 4.9 87.2 1.0 O A:MET322 5.0 28.6 1.0 HA A:THR323 5.0 22.2 1.0 N A:GLY401 5.0 89.2 1.0

Fluorine binding site 2 out of 16 in the Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane within 5.0Å range: probe atom residue distance (Å) B Occ A:F1002 b:15.3 occ:1.00 F2 A:ALF1002 0.0 15.3 1.0 AL A:ALF1002 1.8 14.3 1.0 F4 A:ALF1002 2.5 16.1 1.0 F3 A:ALF1002 2.5 15.9 1.0 HZ2 A:LYS301 2.8 134.2 1.0 O3B A:GDP1001 2.8 9.7 1.0 HG2 A:LYS301 2.9 134.2 1.0 HZ3 A:LYS301 3.0 134.2 1.0 O A:GLN297 3.0 87.2 1.0 HA A:GLN297 3.0 87.2 1.0 H A:LYS301 3.2 90.0 1.0 NZ A:LYS301 3.3 134.2 1.0 HG2 A:GLN297 3.4 121.5 1.0 HA2 A:GLY300 3.5 87.7 1.0 O2B A:GDP1001 3.5 6.3 1.0 F1 A:ALF1002 3.6 15.2 1.0 H A:GLY300 3.6 87.7 1.0 HG23 A:THR302 3.7 134.1 1.0 PB A:GDP1001 3.8 7.8 1.0 C A:GLN297 3.8 87.2 1.0 HA3 A:GLY401 3.8 89.2 1.0 HZ1 A:LYS301 3.8 134.2 1.0 CG A:LYS301 3.8 134.2 1.0 CA A:GLN297 3.8 87.2 1.0 N A:LYS301 3.9 90.0 1.0 H A:THR302 4.0 89.8 1.0 HG1 A:THR323 4.0 32.5 1.0 MG A:MG1003 4.1 7.9 1.0 HD3 A:LYS301 4.1 134.2 1.0 CA A:GLY300 4.2 87.7 1.0 N A:GLY300 4.2 87.7 1.0 HG3 A:LYS301 4.2 134.2 1.0 CG A:GLN297 4.3 121.5 1.0 CD A:LYS301 4.3 134.2 1.0 H A:GLY401 4.4 89.2 1.0 CE A:LYS301 4.4 134.2 1.0 C A:GLY300 4.4 87.7 1.0 O A:ASP296 4.4 90.5 1.0 CA A:GLY401 4.6 89.2 1.0 CB A:GLN297 4.6 121.5 1.0 CG2 A:THR302 4.6 134.1 1.0 O3A A:GDP1001 4.7 9.1 1.0 HA2 A:GLY401 4.7 89.2 1.0 CB A:LYS301 4.7 134.2 1.0 N A:THR302 4.8 89.8 1.0 HG21 A:THR302 4.8 134.1 1.0 HB3 A:LYS301 4.8 134.2 1.0 CD A:GLN297 4.8 121.5 1.0 N A:GLY401 4.8 89.2 1.0 CA A:LYS301 4.8 90.0 1.0 OG1 A:THR323 4.9 32.5 1.0 O1B A:GDP1001 4.9 7.1 1.0 N A:GLN297 4.9 87.2 1.0 HG3 A:GLN297 4.9 121.5 1.0 HE21 A:GLN297 4.9 121.5 1.0 HE3 A:LYS301 5.0 134.2 1.0 HB2 A:GLN297 5.0 121.5 1.0

Fluorine binding site 3 out of 16 in the Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane within 5.0Å range: probe atom residue distance (Å) B Occ A:F1002 b:15.9 occ:1.00 F3 A:ALF1002 0.0 15.9 1.0 AL A:ALF1002 1.8 14.3 1.0 O2B A:GDP1001 2.5 6.3 1.0 F1 A:ALF1002 2.5 15.2 1.0 F2 A:ALF1002 2.5 15.3 1.0 HG2 A:GLN297 2.7 121.5 1.0 O A:GLN297 2.8 87.2 1.0 HE21 A:GLN297 2.9 121.5 1.0 K A:K1004 3.0 30.0 1.0 NE2 A:GLN297 3.0 121.5 1.0 CD A:GLN297 3.2 121.5 1.0 O3B A:GDP1001 3.2 9.7 1.0 HE22 A:GLN297 3.4 121.5 1.0 PB A:GDP1001 3.4 7.8 1.0 CG A:GLN297 3.4 121.5 1.0 F4 A:ALF1002 3.6 16.1 1.0 H A:MET322 3.7 24.4 1.0 C A:GLN297 3.7 87.2 1.0 HA A:MET321 3.8 26.7 1.0 HA A:GLN297 3.9 87.2 1.0 OE1 A:GLN297 3.9 121.5 1.0 O1B A:GDP1001 4.0 7.1 1.0 HG3 A:GLN297 4.1 121.5 1.0 HA2 A:GLY300 4.1 87.7 1.0 H A:GLY300 4.2 87.7 1.0 CA A:GLN297 4.2 87.2 1.0 HG3 A:MET321 4.3 31.7 1.0 CB A:GLN297 4.4 121.5 1.0 MG A:MG1003 4.5 7.9 1.0 N A:MET322 4.5 24.4 1.0 HB2 A:MET322 4.5 33.6 1.0 HA A:SER298 4.5 85.1 1.0 H A:THR323 4.7 25.9 1.0 CA A:MET321 4.7 26.7 1.0 N A:SER298 4.8 85.1 1.0 O3A A:GDP1001 4.8 9.1 1.0 N A:GLY300 4.9 87.7 1.0 HG2 A:MET322 4.9 33.6 1.0 HZ2 A:LYS301 4.9 134.2 1.0 O A:GLU320 4.9 30.1 1.0 CA A:GLY300 4.9 87.7 1.0 HA3 A:GLY401 5.0 89.2 1.0 HG1 A:THR323 5.0 32.5 1.0 HB3 A:GLN297 5.0 121.5 1.0

Fluorine binding site 4 out of 16 in the Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane within 5.0Å range: probe atom residue distance (Å) B Occ A:F1002 b:16.1 occ:1.00 F4 A:ALF1002 0.0 16.1 1.0 AL A:ALF1002 1.8 14.3 1.0 HG1 A:THR323 2.0 32.5 1.0 F1 A:ALF1002 2.5 15.2 1.0 F2 A:ALF1002 2.5 15.3 1.0 HB A:THR323 2.6 32.5 1.0 HZ3 A:LYS301 2.6 134.2 1.0 HZ2 A:LYS301 2.6 134.2 1.0 HZ1 A:LYS301 2.7 134.2 1.0 OG1 A:THR323 2.7 32.5 1.0 H A:GLY401 2.8 89.2 1.0 NZ A:LYS301 2.8 134.2 1.0 CB A:THR323 3.1 32.5 1.0 H A:THR323 3.1 25.9 1.0 N A:GLY401 3.5 89.2 1.0 MG A:MG1003 3.6 7.9 1.0 F3 A:ALF1002 3.6 15.9 1.0 HA3 A:GLY401 3.6 89.2 1.0 HA A:PRO400 3.7 90.2 1.0 HG2 A:GLN297 3.7 121.5 1.0 O3B A:GDP1001 3.7 9.7 1.0 HG23 A:THR302 3.8 134.1 1.0 N A:THR323 3.8 25.9 1.0 CA A:GLY401 4.0 89.2 1.0 CA A:THR323 4.1 22.2 1.0 HG21 A:THR302 4.1 134.1 1.0 HG21 A:THR323 4.1 32.5 1.0 HG2 A:LYS301 4.2 134.2 1.0 CG2 A:THR323 4.2 32.5 1.0 CE A:LYS301 4.3 134.2 1.0 HG3 A:MET321 4.3 31.7 1.0 HA A:GLN297 4.3 87.2 1.0 H A:MET322 4.3 24.4 1.0 CG2 A:THR302 4.4 134.1 1.0 C A:PRO400 4.4 90.2 1.0 HA2 A:GLY401 4.4 89.2 1.0 CA A:PRO400 4.5 90.2 1.0 HB2 A:MET322 4.5 33.6 1.0 O A:LEU399 4.5 91.6 1.0 CG A:GLN297 4.6 121.5 1.0 HE2 A:LYS301 4.7 134.2 1.0 O A:THR323 4.7 24.9 1.0 HE3 A:LYS301 4.7 134.2 1.0 HG22 A:THR302 4.8 134.1 1.0 HG22 A:THR323 4.8 32.5 1.0 HA A:THR323 4.8 22.2 1.0 HG3 A:GLN297 4.9 121.5 1.0 C A:THR323 4.9 23.8 1.0 CG A:LYS301 4.9 134.2 1.0 HG23 A:THR323 4.9 32.5 1.0 HG2 A:MET321 4.9 31.7 1.0 HG3 A:LYS301 4.9 134.2 1.0 HE21 A:GLN297 5.0 121.5 1.0 N A:MET322 5.0 24.4 1.0

Fluorine binding site 5 out of 16 in the Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane within 5.0Å range: probe atom residue distance (Å) B Occ B:F1002 b:11.9 occ:1.00 F1 B:ALF1002 0.0 11.9 1.0 AL B:ALF1002 1.8 10.9 1.0 H B:THR323 2.0 25.9 1.0 MG B:MG1003 2.2 8.2 1.0 HG3 B:MET321 2.4 31.7 1.0 HG2 B:MET321 2.5 31.7 1.0 F4 B:ALF1002 2.5 13.6 1.0 F3 B:ALF1002 2.5 14.3 1.0 HB B:THR323 2.6 34.1 1.0 O1B B:GDP1001 2.6 5.6 1.0 HA B:MET321 2.7 26.7 1.0 N B:THR323 2.8 25.9 1.0 H B:MET322 2.8 24.4 1.0 O3B B:GDP1001 2.8 8.0 1.0 CG B:MET321 2.9 31.7 1.0 N B:MET322 2.9 24.4 1.0 PB B:GDP1001 3.0 7.9 1.0 C B:MET321 3.1 29.2 1.0 O2B B:GDP1001 3.1 8.5 1.0 CA B:MET321 3.2 26.7 1.0 CB B:THR323 3.3 34.1 1.0 CA B:THR323 3.5 22.2 1.0 F2 B:ALF1002 3.6 12.6 1.0 CB B:MET321 3.6 31.7 1.0 OG1 B:THR323 3.6 34.1 1.0 C B:MET322 3.7 27.9 1.0 O B:MET321 3.8 28.9 1.0 CA B:MET322 3.8 22.5 1.0 HB2 B:MET322 4.0 33.6 1.0 HB2 B:MET321 4.1 31.7 1.0 H B:GLY401 4.2 89.2 1.0 O B:THR323 4.2 24.9 1.0 C B:THR323 4.2 23.8 1.0 HB3 B:MET321 4.3 31.7 1.0 HA B:THR323 4.4 22.2 1.0 HE2 B:LYS301 4.4 134.2 1.0 HD3 B:LYS301 4.4 134.2 1.0 CB B:MET322 4.5 33.6 1.0 SD B:MET321 4.5 31.7 1.0 HA B:PRO400 4.5 90.2 1.0 HA B:GLN297 4.5 87.2 1.0 N B:MET321 4.6 23.7 1.0 O3A B:GDP1001 4.6 7.3 1.0 HA B:MET322 4.6 22.5 1.0 CG2 B:THR323 4.7 34.1 1.0 HE3 B:LYS301 4.7 134.2 1.0 O B:GLU320 4.7 30.1 1.0 O B:MET322 4.9 28.6 1.0 HG22 B:THR323 4.9 34.1 1.0 K B:K1004 4.9 30.0 1.0 HG21 B:THR323 4.9 34.1 1.0 N B:GLY401 5.0 89.2 1.0 CE B:LYS301 5.0 134.2 1.0

Fluorine binding site 6 out of 16 in the Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 6 of Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane within 5.0Å range: probe atom residue distance (Å) B Occ B:F1002 b:12.6 occ:1.00 F2 B:ALF1002 0.0 12.6 1.0 AL B:ALF1002 1.8 10.9 1.0 HA B:GLN297 2.3 87.2 1.0 HD3 B:LYS301 2.4 134.2 1.0 O B:ASP296 2.4 90.5 1.0 F4 B:ALF1002 2.5 13.6 1.0 F3 B:ALF1002 2.5 14.3 1.0 CA B:GLN297 3.1 87.2 1.0 HA3 B:GLY401 3.2 89.2 1.0 HB2 B:LYS301 3.3 134.2 1.0 CD B:LYS301 3.3 134.2 1.0 C B:ASP296 3.4 90.5 1.0 O2B B:GDP1001 3.4 8.5 1.0 HG3 B:MET321 3.4 31.7 1.0 C B:GLN297 3.4 87.2 1.0 F1 B:ALF1002 3.6 11.9 1.0 MG B:MG1003 3.6 8.2 1.0 O B:SER298 3.6 85.1 1.0 H B:SER298 3.6 85.1 1.0 N B:GLN297 3.7 87.2 1.0 H B:GLY401 3.7 89.2 1.0 N B:SER298 3.7 85.1 1.0 HB3 B:LYS301 3.7 134.2 1.0 HD2 B:LYS301 3.7 134.2 1.0 CB B:LYS301 3.8 134.2 1.0 CA B:GLY401 3.9 89.2 1.0 CG B:LYS301 4.0 134.2 1.0 O1B B:GDP1001 4.1 5.6 1.0 N B:GLY401 4.1 89.2 1.0 O B:GLN297 4.1 87.2 1.0 HG3 B:LYS301 4.1 134.2 1.0 HA2 B:GLY401 4.1 89.2 1.0 HE2 B:LYS301 4.2 134.2 1.0 CE B:LYS301 4.2 134.2 1.0 HE3 B:LYS301 4.3 134.2 1.0 CB B:GLN297 4.3 121.5 1.0 HG2 B:GLN297 4.3 121.5 1.0 CG B:MET321 4.4 31.7 1.0 PB B:GDP1001 4.4 7.9 1.0 HB3 B:GLN297 4.4 121.5 1.0 C B:SER298 4.5 85.1 1.0 H B:GLN297 4.5 87.2 1.0 CA B:SER298 4.7 85.1 1.0 HA B:MET321 4.7 26.7 1.0 HG2 B:MET321 4.7 31.7 1.0 HB B:THR323 4.7 34.1 1.0 CA B:ASP296 4.8 90.5 1.0 CG B:GLN297 4.8 121.5 1.0 HB3 B:SER298 4.9 114.5 1.0 HG2 B:LYS301 4.9 134.2 1.0 H B:LYS301 4.9 90.0 1.0 K B:K1004 4.9 30.0 1.0 HG3 B:GLN297 5.0 121.5 1.0

Fluorine binding site 7 out of 16 in the Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 7 of Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane within 5.0Å range: probe atom residue distance (Å) B Occ B:F1002 b:14.3 occ:1.00 F3 B:ALF1002 0.0 14.3 1.0 AL B:ALF1002 1.8 10.9 1.0 O1B B:GDP1001 2.1 5.6 1.0 F2 B:ALF1002 2.5 12.6 1.0 F1 B:ALF1002 2.5 11.9 1.0 HA B:MET321 2.5 26.7 1.0 HA B:GLN297 2.7 87.2 1.0 HG3 B:MET321 2.9 31.7 1.0 K B:K1004 2.9 30.0 1.0 PB B:GDP1001 3.1 7.9 1.0 O2B B:GDP1001 3.1 8.5 1.0 O B:GLN297 3.2 87.2 1.0 CA B:GLN297 3.4 87.2 1.0 C B:GLN297 3.4 87.2 1.0 HB3 B:GLN297 3.4 121.5 1.0 CA B:MET321 3.5 26.7 1.0 F4 B:ALF1002 3.6 13.6 1.0 MG B:MG1003 3.6 8.2 1.0 CG B:MET321 3.7 31.7 1.0 H B:MET322 3.7 24.4 1.0 O B:SER298 3.8 85.1 1.0 HB2 B:MET321 3.9 31.7 1.0 CB B:MET321 3.9 31.7 1.0 O B:GLU320 3.9 30.1 1.0 CB B:GLN297 3.9 121.5 1.0 HG2 B:MET321 4.0 31.7 1.0 O3B B:GDP1001 4.0 8.0 1.0 HG2 B:GLN297 4.1 121.5 1.0 N B:MET322 4.2 24.4 1.0 C B:MET321 4.3 29.2 1.0 N B:SER298 4.3 85.1 1.0 O3A B:GDP1001 4.3 7.3 1.0 H B:THR323 4.3 25.9 1.0 O1A B:GDP1001 4.4 9.6 1.0 N B:MET321 4.4 23.7 1.0 HD3 B:LYS301 4.4 134.2 1.0 C B:SER298 4.4 85.1 1.0 O B:ASP296 4.5 90.5 1.0 C B:GLU320 4.5 27.1 1.0 CG B:GLN297 4.6 121.5 1.0 HA B:ALA299 4.6 87.2 1.0 HB2 B:LYS301 4.6 134.2 1.0 N B:GLN297 4.7 87.2 1.0 HB3 B:LYS301 4.7 134.2 1.0 HB2 B:GLN297 4.7 121.5 1.0 H B:SER298 4.7 85.1 1.0 HB3 B:MET321 4.8 31.7 1.0 HB B:THR323 4.9 34.1 1.0 H B:GLY401 4.9 89.2 1.0 HA3 B:GLY401 5.0 89.2 1.0

Fluorine binding site 8 out of 16 in the Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 8 of Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane within 5.0Å range: probe atom residue distance (Å) B Occ B:F1002 b:13.6 occ:1.00 F4 B:ALF1002 0.0 13.6 1.0 AL B:ALF1002 1.8 10.9 1.0 MG B:MG1003 2.2 8.2 1.0 HB B:THR323 2.4 34.1 1.0 HD3 B:LYS301 2.5 134.2 1.0 H B:GLY401 2.5 89.2 1.0 F2 B:ALF1002 2.5 12.6 1.0 F1 B:ALF1002 2.5 11.9 1.0 HE2 B:LYS301 2.5 134.2 1.0 HA B:PRO400 2.9 90.2 1.0 HG3 B:MET321 3.0 31.7 1.0 N B:GLY401 3.0 89.2 1.0 CD B:LYS301 3.1 134.2 1.0 CE B:LYS301 3.2 134.2 1.0 CB B:THR323 3.3 34.1 1.0 HE3 B:LYS301 3.4 134.2 1.0 HD2 B:LYS301 3.4 134.2 1.0 O2B B:GDP1001 3.5 8.5 1.0 HG2 B:MET321 3.5 31.7 1.0 O B:LEU399 3.6 91.6 1.0 F3 B:ALF1002 3.6 14.3 1.0 HA3 B:GLY401 3.6 89.2 1.0 CG B:MET321 3.7 31.7 1.0 C B:PRO400 3.7 90.2 1.0 CA B:PRO400 3.8 90.2 1.0 H B:THR323 3.8 25.9 1.0 HG21 B:THR323 3.8 34.1 1.0 OG1 B:THR323 3.8 34.1 1.0 CA B:GLY401 3.8 89.2 1.0 CG2 B:THR323 4.0 34.1 1.0 HG22 B:THR323 4.1 34.1 1.0 HA2 B:GLY401 4.1 89.2 1.0 HB3 B:LYS301 4.2 134.2 1.0 O B:THR323 4.2 24.9 1.0 HA B:GLN297 4.2 87.2 1.0 PB B:GDP1001 4.3 7.9 1.0 CA B:THR323 4.3 22.2 1.0 SD B:MET321 4.4 31.7 1.0 N B:THR323 4.4 25.9 1.0 O3B B:GDP1001 4.4 8.0 1.0 O1B B:GDP1001 4.4 5.6 1.0 O B:ASP296 4.4 90.5 1.0 CG B:LYS301 4.4 134.2 1.0 C B:LEU399 4.4 91.6 1.0 NZ B:LYS301 4.5 134.2 1.0 N B:PRO400 4.6 90.2 1.0 HB2 B:LYS301 4.6 134.2 1.0 CB B:LYS301 4.6 134.2 1.0 HZ3 B:LYS301 4.7 134.2 1.0 C B:THR323 4.7 23.8 1.0 HA B:MET321 4.7 26.7 1.0 O B:PRO400 4.7 90.2 1.0 HZ1 B:LYS301 4.8 134.2 1.0 HB3 B:PRO400 4.8 201.3 1.0 HG23 B:THR323 4.9 34.1 1.0 HG3 B:LYS301 4.9 134.2 1.0 CB B:PRO400 4.9 201.3 1.0 CB B:MET321 5.0 31.7 1.0

Fluorine binding site 9 out of 16 in the Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 9 of Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane within 5.0Å range: probe atom residue distance (Å) B Occ C:F1002 b:15.2 occ:1.00 F1 C:ALF1002 0.0 15.2 1.0 AL C:ALF1002 1.8 14.3 1.0 H C:MET322 2.0 24.4 1.0 H C:THR323 2.5 25.9 1.0 F4 C:ALF1002 2.5 16.1 1.0 F3 C:ALF1002 2.5 15.9 1.0 HG3 C:MET321 2.6 31.7 1.0 N C:MET322 2.8 24.4 1.0 HA C:MET321 2.9 26.7 1.0 HE21 C:GLN297 3.0 121.5 1.0 HG2 C:GLN297 3.1 121.5 1.0 N C:THR323 3.2 25.9 1.0 HG2 C:MET321 3.2 31.7 1.0 HB2 C:MET322 3.3 33.6 1.0 CG C:MET321 3.3 31.7 1.0 HG1 C:THR323 3.5 32.5 1.0 C C:MET321 3.6 29.2 1.0 F2 C:ALF1002 3.6 15.3 1.0 CA C:MET321 3.6 26.7 1.0 HB C:THR323 3.6 32.5 1.0 CA C:MET322 3.6 22.5 1.0 NE2 C:GLN297 3.7 121.5 1.0 C C:MET322 3.8 27.9 1.0 CG C:GLN297 3.9 121.5 1.0 CB C:MET322 3.9 33.6 1.0 HG3 C:GLN297 4.0 121.5 1.0 MG C:MG1003 4.0 7.9 1.0 CB C:MET321 4.0 31.7 1.0 OG1 C:THR323 4.0 32.5 1.0 O3B C:GDP1001 4.1 9.7 1.0 CB C:THR323 4.1 32.5 1.0 CA C:THR323 4.2 22.2 1.0 H C:GLY401 4.2 89.2 1.0 HE22 C:GLN297 4.2 121.5 1.0 CD C:GLN297 4.2 121.5 1.0 O C:THR323 4.3 24.9 1.0 HB2 C:MET321 4.3 31.7 1.0 HG2 C:MET322 4.4 33.6 1.0 HA C:MET322 4.5 22.5 1.0 O2B C:GDP1001 4.5 6.3 1.0 HB3 C:MET322 4.7 33.6 1.0 O C:MET321 4.7 28.9 1.0 PB C:GDP1001 4.7 7.8 1.0 C C:THR323 4.7 23.8 1.0 CG C:MET322 4.7 33.6 1.0 O1B C:GDP1001 4.8 7.1 1.0 HA3 C:GLY401 4.8 89.2 1.0 HB3 C:MET321 4.8 31.7 1.0 O C:GLU320 4.8 30.1 1.0 HZ2 C:LYS301 4.8 134.2 1.0 SD C:MET321 4.8 31.7 1.0 N C:MET321 4.9 23.7 1.0 HE2 C:MET321 4.9 31.7 1.0 HA C:GLN297 4.9 87.2 1.0 O C:MET322 5.0 28.6 1.0 HA C:THR323 5.0 22.2 1.0 N C:GLY401 5.0 89.2 1.0

Fluorine binding site 10 out of 16 in the Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 10 of Cryoem of the Soluble OPA1 Tetramer From the Gdp-Alfx Bound Helical Assembly on A Lipid Membrane within 5.0Å range: probe atom residue distance (Å) B Occ C:F1002 b:15.3 occ:1.00 F2 C:ALF1002 0.0 15.3 1.0 AL C:ALF1002 1.8 14.3 1.0 F4 C:ALF1002 2.5 16.1 1.0 F3 C:ALF1002 2.5 15.9 1.0 HZ2 C:LYS301 2.8 134.2 1.0 O3B C:GDP1001 2.8 9.7 1.0 HG2 C:LYS301 2.9 134.2 1.0 O C:GLN297 3.0 87.2 1.0 HZ3 C:LYS301 3.0 134.2 1.0 HA C:GLN297 3.0 87.2 1.0 H C:LYS301 3.2 90.0 1.0 NZ C:LYS301 3.3 134.2 1.0 HG2 C:GLN297 3.4 121.5 1.0 HA2 C:GLY300 3.5 87.7 1.0 O2B C:GDP1001 3.5 6.3 1.0 F1 C:ALF1002 3.6 15.2 1.0 H C:GLY300 3.6 87.7 1.0 HG23 C:THR302 3.7 134.1 1.0 PB C:GDP1001 3.8 7.8 1.0 C C:GLN297 3.8 87.2 1.0 HZ1 C:LYS301 3.8 134.2 1.0 HA3 C:GLY401 3.8 89.2 1.0 CG C:LYS301 3.8 134.2 1.0 CA C:GLN297 3.8 87.2 1.0 N C:LYS301 3.9 90.0 1.0 H C:THR302 4.0 89.8 1.0 HG1 C:THR323 4.0 32.5 1.0 MG C:MG1003 4.1 7.9 1.0 HD3 C:LYS301 4.1 134.2 1.0 CA C:GLY300 4.2 87.7 1.0 HG3 C:LYS301 4.2 134.2 1.0 N C:GLY300 4.2 87.7 1.0 CG C:GLN297 4.3 121.5 1.0 CD C:LYS301 4.3 134.2 1.0 H C:GLY401 4.4 89.2 1.0 CE C:LYS301 4.4 134.2 1.0 C C:GLY300 4.4 87.7 1.0 O C:ASP296 4.4 90.5 1.0 CA C:GLY401 4.6 89.2 1.0 CB C:GLN297 4.6 121.5 1.0 CG2 C:THR302 4.6 134.1 1.0 O3A C:GDP1001 4.7 9.1 1.0 HA2 C:GLY401 4.7 89.2 1.0 CB C:LYS301 4.7 134.2 1.0 N C:THR302 4.8 89.8 1.0 HG21 C:THR302 4.8 134.1 1.0 HB3 C:LYS301 4.8 134.2 1.0 CD C:GLN297 4.8 121.5 1.0 N C:GLY401 4.8 89.2 1.0 CA C:LYS301 4.8 90.0 1.0 OG1 C:THR323 4.9 32.5 1.0 O1B C:GDP1001 4.9 7.1 1.0 N C:GLN297 4.9 87.2 1.0 HG3 C:GLN297 4.9 121.5 1.0 HE21 C:GLN297 4.9 121.5 1.0 HE3 C:LYS301 5.0 134.2 1.0 HB2 C:GLN297 5.0 121.5 1.0

S.B.Nyenhuis, X.Wu, A.E.Stanton, M.P.Strub, Y.I.Yim, B.Canagarajah, J.E.Hinshaw. OPA1 Helical Structures Give Perspective to Mitochondrial Dysfunction Nature 2023.
ISSN: ESSN 1476-4687