Fluorine in PDB 8tav: Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound
Protein crystallography data
The structure of Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound, PDB code: 8tav
was solved by
M.Fellner,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
47.65 /
1.39
|
Space group
|
P 43
|
Cell size a, b, c (Å), α, β, γ (°)
|
67.381,
67.381,
55.473,
90,
90,
90
|
R / Rfree (%)
|
16 /
18.3
|
Other elements in 8tav:
The structure of Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound also contains other interesting chemical elements:
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound
(pdb code 8tav). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 9 binding sites of Fluorine where determined in the
Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound, PDB code: 8tav:
Jump to Fluorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
Fluorine binding site 1 out
of 9 in 8tav
Go back to
Fluorine Binding Sites List in 8tav
Fluorine binding site 1 out
of 9 in the Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F301
b:21.1
occ:0.95
|
F09
|
A:ZKR301
|
0.0
|
21.1
|
0.9
|
C08
|
A:ZKR301
|
1.4
|
19.7
|
0.9
|
F10
|
A:ZKR301
|
2.2
|
20.2
|
0.9
|
F11
|
A:ZKR301
|
2.2
|
20.6
|
0.9
|
C07
|
A:ZKR301
|
2.3
|
13.6
|
0.9
|
HA
|
A:ILE126
|
2.4
|
17.8
|
1.0
|
H061
|
A:ZKR301
|
2.6
|
18.7
|
0.9
|
HG13
|
A:ILE126
|
2.7
|
19.0
|
1.0
|
C06
|
A:ZKR301
|
2.8
|
15.6
|
0.9
|
HG12
|
A:ILE126
|
2.9
|
19.0
|
1.0
|
N
|
A:ILE126
|
3.0
|
15.3
|
1.0
|
CA
|
A:ILE126
|
3.1
|
14.9
|
1.0
|
HB3
|
A:ALA125
|
3.1
|
20.2
|
1.0
|
C
|
A:ALA125
|
3.1
|
16.9
|
1.0
|
CG1
|
A:ILE126
|
3.2
|
15.8
|
1.0
|
HB1
|
A:ALA125
|
3.2
|
20.2
|
1.0
|
O
|
A:ALA125
|
3.3
|
16.6
|
1.0
|
H
|
A:ILE126
|
3.3
|
18.4
|
1.0
|
CB
|
A:ALA125
|
3.5
|
16.9
|
1.0
|
CB
|
A:ILE126
|
3.7
|
16.1
|
1.0
|
HD2
|
A:PHE24
|
3.8
|
18.8
|
1.0
|
HD11
|
A:LEU168
|
3.9
|
32.3
|
1.0
|
S12
|
A:ZKR301
|
3.9
|
14.0
|
0.9
|
CA
|
A:ALA125
|
4.0
|
16.1
|
1.0
|
HD21
|
A:LEU164
|
4.1
|
22.6
|
1.0
|
CD2
|
A:PHE24
|
4.3
|
15.6
|
1.0
|
O
|
A:THR122
|
4.3
|
17.2
|
0.5
|
O
|
A:THR122
|
4.3
|
17.1
|
0.5
|
C05
|
A:ZKR301
|
4.3
|
15.1
|
0.9
|
C
|
A:ILE126
|
4.4
|
15.9
|
1.0
|
HB
|
A:ILE126
|
4.4
|
19.4
|
1.0
|
HB2
|
A:ALA125
|
4.4
|
20.2
|
1.0
|
HG22
|
A:ILE193
|
4.5
|
22.7
|
1.0
|
HG23
|
A:ILE126
|
4.5
|
19.6
|
1.0
|
HE2
|
A:PHE24
|
4.5
|
20.6
|
1.0
|
HG3
|
A:PRO117
|
4.5
|
19.3
|
1.0
|
CD1
|
A:ILE126
|
4.5
|
16.6
|
1.0
|
CD1
|
A:LEU168
|
4.5
|
26.9
|
1.0
|
HD23
|
A:LEU164
|
4.5
|
22.6
|
1.0
|
HD13
|
A:LEU168
|
4.5
|
32.3
|
1.0
|
HD11
|
A:ILE126
|
4.6
|
19.9
|
1.0
|
HA
|
A:ALA125
|
4.6
|
19.3
|
1.0
|
HD12
|
A:LEU168
|
4.6
|
32.3
|
1.0
|
HG23
|
A:THR122
|
4.6
|
24.7
|
0.5
|
CE2
|
A:PHE24
|
4.7
|
17.1
|
1.0
|
CG2
|
A:ILE126
|
4.7
|
16.3
|
1.0
|
O
|
A:ILE126
|
4.7
|
16.8
|
1.0
|
CD2
|
A:LEU164
|
4.7
|
18.9
|
1.0
|
HG
|
A:LEU164
|
4.8
|
19.7
|
1.0
|
C04
|
A:ZKR301
|
4.8
|
14.2
|
0.9
|
HB3
|
A:PHE24
|
4.9
|
17.4
|
1.0
|
N
|
A:ALA125
|
4.9
|
16.1
|
1.0
|
|
Fluorine binding site 2 out
of 9 in 8tav
Go back to
Fluorine Binding Sites List in 8tav
Fluorine binding site 2 out
of 9 in the Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F301
b:20.2
occ:0.95
|
F10
|
A:ZKR301
|
0.0
|
20.2
|
0.9
|
C08
|
A:ZKR301
|
1.3
|
19.7
|
0.9
|
F11
|
A:ZKR301
|
2.1
|
20.6
|
0.9
|
F09
|
A:ZKR301
|
2.2
|
21.1
|
0.9
|
C07
|
A:ZKR301
|
2.4
|
13.6
|
0.9
|
HG3
|
A:PRO117
|
2.5
|
19.3
|
1.0
|
HD11
|
A:LEU168
|
3.2
|
32.3
|
1.0
|
HB3
|
A:ALA125
|
3.2
|
20.2
|
1.0
|
HB3
|
A:PRO117
|
3.2
|
19.6
|
1.0
|
HB1
|
A:ALA125
|
3.3
|
20.2
|
1.0
|
CG
|
A:PRO117
|
3.3
|
16.1
|
1.0
|
S12
|
A:ZKR301
|
3.3
|
14.0
|
0.9
|
HG22
|
A:ILE193
|
3.3
|
22.7
|
1.0
|
HB2
|
A:PRO117
|
3.4
|
19.6
|
1.0
|
HD13
|
A:LEU168
|
3.4
|
32.3
|
1.0
|
CB
|
A:PRO117
|
3.5
|
16.3
|
1.0
|
C06
|
A:ZKR301
|
3.5
|
15.6
|
0.9
|
HG21
|
A:ILE193
|
3.6
|
22.7
|
1.0
|
CB
|
A:ALA125
|
3.7
|
16.9
|
1.0
|
HG2
|
A:PRO117
|
3.7
|
19.3
|
1.0
|
CD1
|
A:LEU168
|
3.7
|
26.9
|
1.0
|
H061
|
A:ZKR301
|
3.8
|
18.7
|
0.9
|
HG13
|
A:ILE126
|
3.8
|
19.0
|
1.0
|
CG2
|
A:ILE193
|
3.9
|
18.9
|
1.0
|
HG23
|
A:THR122
|
4.1
|
24.7
|
0.5
|
HD12
|
A:LEU168
|
4.2
|
32.3
|
1.0
|
HB2
|
A:ALA125
|
4.3
|
20.2
|
1.0
|
HG23
|
A:ILE193
|
4.3
|
22.7
|
1.0
|
HD21
|
A:LEU168
|
4.4
|
23.4
|
1.0
|
HG12
|
A:ILE126
|
4.4
|
19.0
|
1.0
|
HD3
|
A:PRO117
|
4.4
|
19.1
|
1.0
|
CD
|
A:PRO117
|
4.5
|
15.9
|
1.0
|
HA
|
A:ILE126
|
4.6
|
17.8
|
1.0
|
CG1
|
A:ILE126
|
4.6
|
15.8
|
1.0
|
C
|
A:ALA125
|
4.6
|
16.9
|
1.0
|
N
|
A:ILE126
|
4.6
|
15.3
|
1.0
|
C04
|
A:ZKR301
|
4.6
|
14.2
|
0.9
|
C05
|
A:ZKR301
|
4.7
|
15.1
|
0.9
|
HA
|
A:THR122
|
4.7
|
23.1
|
0.5
|
HA
|
A:THR122
|
4.7
|
23.1
|
0.5
|
H
|
A:ILE126
|
4.7
|
18.4
|
1.0
|
CA
|
A:ALA125
|
4.8
|
16.1
|
1.0
|
O
|
A:THR122
|
4.8
|
17.2
|
0.5
|
O
|
A:THR122
|
4.8
|
17.1
|
0.5
|
HD22
|
A:LEU168
|
4.9
|
23.4
|
1.0
|
O
|
A:ALA125
|
4.9
|
16.6
|
1.0
|
CD2
|
A:LEU168
|
5.0
|
19.5
|
1.0
|
CG
|
A:LEU168
|
5.0
|
20.2
|
1.0
|
CA
|
A:PRO117
|
5.0
|
16.1
|
1.0
|
|
Fluorine binding site 3 out
of 9 in 8tav
Go back to
Fluorine Binding Sites List in 8tav
Fluorine binding site 3 out
of 9 in the Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F301
b:20.6
occ:0.95
|
F11
|
A:ZKR301
|
0.0
|
20.6
|
0.9
|
C08
|
A:ZKR301
|
1.3
|
19.7
|
0.9
|
F10
|
A:ZKR301
|
2.1
|
20.2
|
0.9
|
F09
|
A:ZKR301
|
2.2
|
21.1
|
0.9
|
C07
|
A:ZKR301
|
2.3
|
13.6
|
0.9
|
HD11
|
A:LEU168
|
2.7
|
32.3
|
1.0
|
S12
|
A:ZKR301
|
3.1
|
14.0
|
0.9
|
HG3
|
A:PRO117
|
3.3
|
19.3
|
1.0
|
HD21
|
A:LEU164
|
3.3
|
22.6
|
1.0
|
HD13
|
A:LEU94
|
3.4
|
18.6
|
1.0
|
C06
|
A:ZKR301
|
3.5
|
15.6
|
0.9
|
HB2
|
A:LEU94
|
3.5
|
16.9
|
1.0
|
CD1
|
A:LEU168
|
3.6
|
26.9
|
1.0
|
HG12
|
A:ILE126
|
3.6
|
19.0
|
1.0
|
HD11
|
A:LEU164
|
3.8
|
20.1
|
1.0
|
HB2
|
A:PHE24
|
3.8
|
17.4
|
1.0
|
HD13
|
A:LEU168
|
3.9
|
32.3
|
1.0
|
HD21
|
A:LEU168
|
3.9
|
23.4
|
1.0
|
HG13
|
A:ILE126
|
3.9
|
19.0
|
1.0
|
H061
|
A:ZKR301
|
3.9
|
18.7
|
0.9
|
HD12
|
A:LEU168
|
4.0
|
32.3
|
1.0
|
HG
|
A:LEU164
|
4.0
|
19.7
|
1.0
|
HD2
|
A:PHE24
|
4.0
|
18.8
|
1.0
|
HD22
|
A:LEU94
|
4.1
|
19.8
|
1.0
|
CD2
|
A:LEU164
|
4.1
|
18.9
|
1.0
|
CG
|
A:PRO117
|
4.2
|
16.1
|
1.0
|
HA
|
A:ILE126
|
4.2
|
17.8
|
1.0
|
CG1
|
A:ILE126
|
4.2
|
15.8
|
1.0
|
HB3
|
A:PHE24
|
4.2
|
17.4
|
1.0
|
CD1
|
A:LEU94
|
4.3
|
15.5
|
1.0
|
HG2
|
A:PRO117
|
4.3
|
19.3
|
1.0
|
CD2
|
A:PHE24
|
4.4
|
15.6
|
1.0
|
CB
|
A:PHE24
|
4.4
|
14.5
|
1.0
|
HD23
|
A:LEU164
|
4.4
|
22.6
|
1.0
|
CB
|
A:LEU94
|
4.4
|
14.1
|
1.0
|
CG
|
A:LEU164
|
4.5
|
16.4
|
1.0
|
C04
|
A:ZKR301
|
4.5
|
14.2
|
0.9
|
CD1
|
A:LEU164
|
4.5
|
16.8
|
1.0
|
CG
|
A:PHE24
|
4.6
|
14.1
|
1.0
|
C05
|
A:ZKR301
|
4.6
|
15.1
|
0.9
|
CG
|
A:LEU168
|
4.6
|
20.2
|
1.0
|
HD12
|
A:LEU94
|
4.6
|
18.6
|
1.0
|
CD2
|
A:LEU168
|
4.6
|
19.5
|
1.0
|
HA
|
A:LEU94
|
4.7
|
15.2
|
1.0
|
CG
|
A:LEU94
|
4.7
|
14.3
|
1.0
|
HG
|
A:LEU168
|
4.8
|
24.3
|
1.0
|
CD2
|
A:LEU94
|
4.9
|
16.4
|
1.0
|
HB3
|
A:ALA125
|
4.9
|
20.2
|
1.0
|
HB1
|
A:ALA125
|
4.9
|
20.2
|
1.0
|
HD22
|
A:LEU164
|
4.9
|
22.6
|
1.0
|
HD11
|
A:LEU94
|
4.9
|
18.6
|
1.0
|
HD11
|
A:ILE126
|
4.9
|
19.9
|
1.0
|
HB3
|
A:PRO117
|
4.9
|
19.6
|
1.0
|
CB
|
A:PRO117
|
5.0
|
16.3
|
1.0
|
CA
|
A:ILE126
|
5.0
|
14.9
|
1.0
|
HD12
|
A:LEU164
|
5.0
|
20.1
|
1.0
|
|
Fluorine binding site 4 out
of 9 in 8tav
Go back to
Fluorine Binding Sites List in 8tav
Fluorine binding site 4 out
of 9 in the Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F302
b:33.2
occ:0.85
|
F09
|
A:ZKR302
|
0.0
|
33.2
|
0.8
|
C08
|
A:ZKR302
|
1.4
|
31.1
|
0.8
|
F11
|
A:ZKR302
|
2.2
|
26.3
|
0.8
|
F10
|
A:ZKR302
|
2.3
|
27.7
|
0.8
|
C07
|
A:ZKR302
|
2.4
|
21.5
|
0.8
|
H061
|
A:ZKR302
|
2.8
|
33.8
|
0.8
|
HB2
|
A:PHE69
|
2.8
|
16.9
|
1.0
|
HB3
|
A:PHE69
|
2.8
|
16.9
|
1.0
|
C06
|
A:ZKR302
|
2.9
|
28.1
|
0.8
|
HD2
|
A:PHE69
|
3.0
|
18.4
|
1.0
|
CB
|
A:PHE69
|
3.1
|
14.1
|
1.0
|
F11
|
A:ZKR303
|
3.2
|
23.6
|
0.9
|
CD2
|
A:PHE69
|
3.2
|
15.3
|
1.0
|
CG
|
A:PHE69
|
3.3
|
14.3
|
1.0
|
HD1
|
A:PHE66
|
3.3
|
27.2
|
1.0
|
HE2
|
A:LYS101
|
3.4
|
24.5
|
1.0
|
HA
|
A:PHE66
|
3.5
|
23.3
|
1.0
|
HD3
|
A:LYS101
|
3.5
|
21.1
|
1.0
|
HE3
|
A:LYS101
|
3.7
|
24.5
|
1.0
|
CE
|
A:LYS101
|
3.9
|
20.4
|
1.0
|
S12
|
A:ZKR302
|
4.0
|
24.1
|
0.8
|
HD2
|
A:LYS101
|
4.0
|
21.1
|
1.0
|
CD
|
A:LYS101
|
4.0
|
17.6
|
1.0
|
H061
|
A:ZKR303
|
4.1
|
24.3
|
0.9
|
O
|
A:PRO65
|
4.2
|
17.3
|
1.0
|
CE2
|
A:PHE69
|
4.2
|
15.7
|
1.0
|
CD1
|
A:PHE66
|
4.2
|
22.7
|
1.0
|
HE1
|
A:PHE98
|
4.2
|
18.3
|
1.0
|
CD1
|
A:PHE69
|
4.2
|
15.0
|
1.0
|
C08
|
A:ZKR303
|
4.3
|
27.4
|
0.9
|
C05
|
A:ZKR302
|
4.3
|
31.6
|
0.8
|
F09
|
A:ZKR303
|
4.4
|
26.2
|
0.9
|
CA
|
A:PHE66
|
4.4
|
19.4
|
1.0
|
HB1
|
A:ALA167
|
4.4
|
20.8
|
1.0
|
HE2
|
A:PHE69
|
4.5
|
18.8
|
1.0
|
HE1
|
A:PHE66
|
4.6
|
34.8
|
1.0
|
CA
|
A:PHE69
|
4.6
|
14.4
|
1.0
|
H
|
A:PHE69
|
4.6
|
17.1
|
1.0
|
HD1
|
A:PHE69
|
4.6
|
18.0
|
1.0
|
C06
|
A:ZKR303
|
4.6
|
20.3
|
0.9
|
C07
|
A:ZKR303
|
4.7
|
18.1
|
0.9
|
CE1
|
A:PHE98
|
4.8
|
15.3
|
1.0
|
C
|
A:PRO65
|
4.8
|
16.7
|
1.0
|
HD11
|
A:ILE171
|
4.8
|
20.6
|
1.0
|
HB2
|
A:ALA167
|
4.8
|
20.8
|
1.0
|
HB2
|
A:PRO65
|
4.8
|
22.3
|
1.0
|
CE1
|
A:PHE66
|
4.9
|
29.0
|
1.0
|
C04
|
A:ZKR302
|
4.9
|
25.0
|
0.8
|
N
|
A:PHE66
|
4.9
|
16.1
|
1.0
|
O
|
A:PHE66
|
5.0
|
18.0
|
1.0
|
CZ
|
A:PHE69
|
5.0
|
13.9
|
1.0
|
CE1
|
A:PHE69
|
5.0
|
14.4
|
1.0
|
|
Fluorine binding site 5 out
of 9 in 8tav
Go back to
Fluorine Binding Sites List in 8tav
Fluorine binding site 5 out
of 9 in the Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F302
b:27.7
occ:0.85
|
F10
|
A:ZKR302
|
0.0
|
27.7
|
0.8
|
C08
|
A:ZKR302
|
1.4
|
31.1
|
0.8
|
F11
|
A:ZKR302
|
2.2
|
26.3
|
0.8
|
F09
|
A:ZKR302
|
2.3
|
33.2
|
0.8
|
C07
|
A:ZKR302
|
2.3
|
21.5
|
0.8
|
HB1
|
A:ALA167
|
2.6
|
20.8
|
1.0
|
HE2
|
A:LYS101
|
2.9
|
24.5
|
1.0
|
HD11
|
A:ILE171
|
2.9
|
20.6
|
1.0
|
HD2
|
A:LYS101
|
3.0
|
21.1
|
1.0
|
S12
|
A:ZKR302
|
3.0
|
24.1
|
0.8
|
CB
|
A:ALA167
|
3.5
|
17.3
|
1.0
|
HD3
|
A:LYS101
|
3.5
|
21.1
|
1.0
|
CD
|
A:LYS101
|
3.5
|
17.6
|
1.0
|
HB2
|
A:ALA167
|
3.5
|
20.8
|
1.0
|
HE1
|
A:PHE98
|
3.6
|
18.3
|
1.0
|
CE
|
A:LYS101
|
3.6
|
20.4
|
1.0
|
C06
|
A:ZKR302
|
3.6
|
28.1
|
0.8
|
HG13
|
A:ILE171
|
3.8
|
18.1
|
1.0
|
CD1
|
A:ILE171
|
3.9
|
17.2
|
1.0
|
HA
|
A:ALA167
|
3.9
|
20.6
|
1.0
|
HE3
|
A:LYS101
|
4.0
|
24.5
|
1.0
|
HB2
|
A:PHE69
|
4.0
|
16.9
|
1.0
|
H061
|
A:ZKR302
|
4.1
|
33.8
|
0.8
|
HB3
|
A:ALA167
|
4.2
|
20.8
|
1.0
|
CA
|
A:ALA167
|
4.2
|
17.2
|
1.0
|
HD12
|
A:ILE171
|
4.2
|
20.6
|
1.0
|
CG1
|
A:ILE171
|
4.3
|
15.1
|
1.0
|
HD1
|
A:PHE98
|
4.4
|
16.9
|
1.0
|
CE1
|
A:PHE98
|
4.4
|
15.3
|
1.0
|
O
|
A:ALA167
|
4.4
|
18.8
|
1.0
|
HD1
|
A:PHE66
|
4.4
|
27.2
|
1.0
|
HG12
|
A:ILE171
|
4.4
|
18.1
|
1.0
|
HD13
|
A:ILE171
|
4.5
|
20.6
|
1.0
|
C04
|
A:ZKR302
|
4.5
|
25.0
|
0.8
|
C
|
A:ALA167
|
4.6
|
17.7
|
1.0
|
C05
|
A:ZKR302
|
4.6
|
31.6
|
0.8
|
HE1
|
A:PHE66
|
4.6
|
34.8
|
1.0
|
CG
|
A:PHE69
|
4.7
|
14.3
|
1.0
|
CB
|
A:PHE69
|
4.7
|
14.1
|
1.0
|
HB2
|
A:PRO65
|
4.7
|
22.3
|
1.0
|
HZ3
|
A:LYS101
|
4.7
|
25.3
|
1.0
|
NZ
|
A:LYS101
|
4.8
|
21.1
|
1.0
|
HB3
|
A:PHE69
|
4.8
|
16.9
|
1.0
|
CD1
|
A:PHE98
|
4.8
|
14.0
|
1.0
|
CD2
|
A:PHE69
|
4.9
|
15.3
|
1.0
|
HB
|
A:THR170
|
4.9
|
23.9
|
1.0
|
HD2
|
A:PHE69
|
5.0
|
18.4
|
1.0
|
CG
|
A:LYS101
|
5.0
|
15.2
|
1.0
|
|
Fluorine binding site 6 out
of 9 in 8tav
Go back to
Fluorine Binding Sites List in 8tav
Fluorine binding site 6 out
of 9 in the Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F302
b:26.3
occ:0.85
|
F11
|
A:ZKR302
|
0.0
|
26.3
|
0.8
|
C08
|
A:ZKR302
|
1.4
|
31.1
|
0.8
|
F09
|
A:ZKR302
|
2.2
|
33.2
|
0.8
|
F10
|
A:ZKR302
|
2.2
|
27.7
|
0.8
|
C07
|
A:ZKR302
|
2.4
|
21.5
|
0.8
|
HD1
|
A:PHE66
|
2.6
|
27.2
|
1.0
|
HB2
|
A:ALA167
|
2.8
|
20.8
|
1.0
|
HB1
|
A:ALA167
|
2.8
|
20.8
|
1.0
|
HB2
|
A:PRO65
|
3.1
|
22.3
|
1.0
|
CB
|
A:ALA167
|
3.2
|
17.3
|
1.0
|
HE1
|
A:PHE66
|
3.3
|
34.8
|
1.0
|
CD1
|
A:PHE66
|
3.3
|
22.7
|
1.0
|
HA
|
A:PHE66
|
3.4
|
23.3
|
1.0
|
S12
|
A:ZKR302
|
3.4
|
24.1
|
0.8
|
C06
|
A:ZKR302
|
3.5
|
28.1
|
0.8
|
CE1
|
A:PHE66
|
3.6
|
29.0
|
1.0
|
O
|
A:PRO65
|
3.7
|
17.3
|
1.0
|
H061
|
A:ZKR302
|
3.7
|
33.8
|
0.8
|
HB3
|
A:ALA167
|
3.8
|
20.8
|
1.0
|
C
|
A:PRO65
|
3.8
|
16.7
|
1.0
|
HB2
|
A:PHE69
|
3.8
|
16.9
|
1.0
|
HE1
|
A:PHE98
|
3.9
|
18.3
|
1.0
|
HG2
|
A:PRO65
|
4.0
|
23.3
|
1.0
|
N
|
A:PHE66
|
4.0
|
16.1
|
1.0
|
CB
|
A:PRO65
|
4.0
|
18.6
|
1.0
|
CA
|
A:PHE66
|
4.1
|
19.4
|
1.0
|
HB3
|
A:PHE69
|
4.3
|
16.9
|
1.0
|
HA
|
A:ALA167
|
4.3
|
20.6
|
1.0
|
H
|
A:PHE66
|
4.4
|
19.4
|
1.0
|
CG
|
A:PHE66
|
4.4
|
18.8
|
1.0
|
CA
|
A:ALA167
|
4.4
|
17.2
|
1.0
|
HE2
|
A:LYS101
|
4.5
|
24.5
|
1.0
|
CB
|
A:PHE69
|
4.5
|
14.1
|
1.0
|
CG
|
A:PRO65
|
4.5
|
19.4
|
1.0
|
CA
|
A:PRO65
|
4.5
|
16.1
|
1.0
|
C05
|
A:ZKR302
|
4.6
|
31.6
|
0.8
|
F11
|
A:ZKR303
|
4.6
|
23.6
|
0.9
|
HB3
|
A:PRO65
|
4.6
|
22.3
|
1.0
|
CE1
|
A:PHE98
|
4.6
|
15.3
|
1.0
|
C04
|
A:ZKR302
|
4.7
|
25.0
|
0.8
|
CB
|
A:PHE66
|
4.8
|
17.3
|
1.0
|
CZ
|
A:PHE66
|
4.8
|
23.1
|
1.0
|
HD11
|
A:ILE171
|
4.9
|
20.6
|
1.0
|
HG3
|
A:PRO65
|
4.9
|
23.3
|
1.0
|
|
Fluorine binding site 7 out
of 9 in 8tav
Go back to
Fluorine Binding Sites List in 8tav
Fluorine binding site 7 out
of 9 in the Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 7 of Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F303
b:26.2
occ:0.94
|
F09
|
A:ZKR303
|
0.0
|
26.2
|
0.9
|
C08
|
A:ZKR303
|
1.3
|
27.4
|
0.9
|
F11
|
A:ZKR303
|
2.2
|
23.6
|
0.9
|
F10
|
A:ZKR303
|
2.2
|
32.0
|
0.9
|
H061
|
A:ZKR302
|
2.3
|
33.8
|
0.8
|
C07
|
A:ZKR303
|
2.3
|
18.1
|
0.9
|
H061
|
A:ZKR303
|
2.9
|
24.3
|
0.9
|
C06
|
A:ZKR303
|
3.0
|
20.3
|
0.9
|
C06
|
A:ZKR302
|
3.2
|
28.1
|
0.8
|
HB3
|
A:PHE66
|
3.5
|
20.7
|
1.0
|
H051
|
A:ZKR302
|
3.5
|
37.9
|
0.8
|
HD1
|
A:PHE66
|
3.7
|
27.2
|
1.0
|
C05
|
A:ZKR302
|
3.8
|
31.6
|
0.8
|
S12
|
A:ZKR303
|
3.8
|
20.4
|
0.9
|
CD1
|
A:PHE66
|
4.1
|
22.7
|
1.0
|
HA
|
A:PHE66
|
4.1
|
23.3
|
1.0
|
CB
|
A:PHE66
|
4.3
|
17.3
|
1.0
|
C05
|
A:ZKR303
|
4.3
|
17.5
|
0.9
|
HD2
|
A:PHE69
|
4.3
|
18.4
|
1.0
|
C07
|
A:ZKR302
|
4.4
|
21.5
|
0.8
|
F09
|
A:ZKR302
|
4.4
|
33.2
|
0.8
|
CG
|
A:PHE66
|
4.4
|
18.8
|
1.0
|
CA
|
A:PHE66
|
4.7
|
19.4
|
1.0
|
C04
|
A:ZKR303
|
4.8
|
16.9
|
0.9
|
CE1
|
A:PHE66
|
4.9
|
29.0
|
1.0
|
C08
|
A:ZKR302
|
4.9
|
31.1
|
0.8
|
O
|
A:PHE66
|
5.0
|
18.0
|
1.0
|
|
Fluorine binding site 8 out
of 9 in 8tav
Go back to
Fluorine Binding Sites List in 8tav
Fluorine binding site 8 out
of 9 in the Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 8 of Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F303
b:32.0
occ:0.94
|
F10
|
A:ZKR303
|
0.0
|
32.0
|
0.9
|
C08
|
A:ZKR303
|
1.4
|
27.4
|
0.9
|
F09
|
A:ZKR303
|
2.2
|
26.2
|
0.9
|
F11
|
A:ZKR303
|
2.2
|
23.6
|
0.9
|
C07
|
A:ZKR303
|
2.3
|
18.1
|
0.9
|
S12
|
A:ZKR303
|
2.9
|
20.4
|
0.9
|
HB3
|
A:PHE66
|
3.3
|
20.7
|
1.0
|
C06
|
A:ZKR303
|
3.7
|
20.3
|
0.9
|
O
|
A:HOH602
|
3.7
|
39.6
|
1.0
|
O
|
A:PHE66
|
3.8
|
18.0
|
1.0
|
HB2
|
A:LYS70
|
4.0
|
19.0
|
1.0
|
CB
|
A:PHE66
|
4.2
|
17.3
|
1.0
|
H061
|
A:ZKR302
|
4.2
|
33.8
|
0.8
|
H061
|
A:ZKR303
|
4.2
|
24.3
|
0.9
|
HA
|
A:PHE66
|
4.2
|
23.3
|
1.0
|
HD2
|
A:PHE69
|
4.4
|
18.4
|
1.0
|
C
|
A:PHE66
|
4.4
|
18.4
|
1.0
|
C04
|
A:ZKR303
|
4.4
|
16.9
|
0.9
|
CA
|
A:PHE66
|
4.5
|
19.4
|
1.0
|
HD3
|
A:LYS70
|
4.6
|
44.5
|
1.0
|
C05
|
A:ZKR303
|
4.6
|
17.5
|
0.9
|
HB2
|
A:PHE66
|
4.7
|
20.7
|
1.0
|
HD1
|
A:PHE66
|
4.8
|
27.2
|
1.0
|
H
|
A:LYS70
|
4.9
|
16.6
|
1.0
|
HB3
|
A:PHE69
|
4.9
|
16.9
|
1.0
|
CB
|
A:LYS70
|
4.9
|
15.8
|
1.0
|
CG
|
A:PHE66
|
5.0
|
18.8
|
1.0
|
|
Fluorine binding site 9 out
of 9 in 8tav
Go back to
Fluorine Binding Sites List in 8tav
Fluorine binding site 9 out
of 9 in the Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 9 of Fphh, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases H, Boronic Acid-Based Compound N34 Bound within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F303
b:23.6
occ:0.94
|
F11
|
A:ZKR303
|
0.0
|
23.6
|
0.9
|
C08
|
A:ZKR303
|
1.3
|
27.4
|
0.9
|
F09
|
A:ZKR303
|
2.2
|
26.2
|
0.9
|
F10
|
A:ZKR303
|
2.2
|
32.0
|
0.9
|
C07
|
A:ZKR303
|
2.3
|
18.1
|
0.9
|
HD2
|
A:PHE69
|
2.7
|
18.4
|
1.0
|
H061
|
A:ZKR302
|
2.8
|
33.8
|
0.8
|
HA
|
A:PHE66
|
2.8
|
23.3
|
1.0
|
HB3
|
A:PHE69
|
3.0
|
16.9
|
1.0
|
O
|
A:PHE66
|
3.2
|
18.0
|
1.0
|
HB3
|
A:PHE66
|
3.2
|
20.7
|
1.0
|
C06
|
A:ZKR303
|
3.2
|
20.3
|
0.9
|
F09
|
A:ZKR302
|
3.2
|
33.2
|
0.8
|
H061
|
A:ZKR303
|
3.4
|
24.3
|
0.9
|
HD1
|
A:PHE66
|
3.4
|
27.2
|
1.0
|
CA
|
A:PHE66
|
3.5
|
19.4
|
1.0
|
S12
|
A:ZKR303
|
3.6
|
20.4
|
0.9
|
CD2
|
A:PHE69
|
3.6
|
15.3
|
1.0
|
C
|
A:PHE66
|
3.8
|
18.4
|
1.0
|
C06
|
A:ZKR302
|
3.8
|
28.1
|
0.8
|
CB
|
A:PHE66
|
3.8
|
17.3
|
1.0
|
CB
|
A:PHE69
|
3.9
|
14.1
|
1.0
|
H
|
A:LYS70
|
4.1
|
16.6
|
1.0
|
CD1
|
A:PHE66
|
4.2
|
22.7
|
1.0
|
C08
|
A:ZKR302
|
4.2
|
31.1
|
0.8
|
CG
|
A:PHE69
|
4.2
|
14.3
|
1.0
|
HB2
|
A:LYS70
|
4.3
|
19.0
|
1.0
|
HB2
|
A:PHE69
|
4.3
|
16.9
|
1.0
|
C07
|
A:ZKR302
|
4.4
|
21.5
|
0.8
|
C05
|
A:ZKR303
|
4.4
|
17.5
|
0.9
|
CG
|
A:PHE66
|
4.4
|
18.8
|
1.0
|
N
|
A:LYS70
|
4.5
|
13.8
|
1.0
|
F11
|
A:ZKR302
|
4.6
|
26.3
|
0.8
|
HB2
|
A:PHE66
|
4.6
|
20.7
|
1.0
|
HE2
|
A:PHE69
|
4.7
|
18.8
|
1.0
|
CE2
|
A:PHE69
|
4.7
|
15.7
|
1.0
|
C04
|
A:ZKR303
|
4.7
|
16.9
|
0.9
|
N
|
A:PHE66
|
4.8
|
16.1
|
1.0
|
H
|
A:PHE69
|
4.8
|
17.1
|
1.0
|
O
|
A:PRO65
|
4.8
|
17.3
|
1.0
|
C05
|
A:ZKR302
|
4.9
|
31.6
|
0.8
|
CA
|
A:PHE69
|
4.9
|
14.4
|
1.0
|
C
|
A:PHE69
|
5.0
|
14.2
|
1.0
|
O
|
A:HOH602
|
5.0
|
39.6
|
1.0
|
|
Reference:
M.Fellner,
M.Fellner.
N/A N/A.
Page generated: Sat Aug 3 00:27:17 2024
|