Fluorine in PDB 8tyq: Structure of the C-Terminal Half of LRRK2 Bound to Gzd-824 (G2019S Mutant)
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Structure of the C-Terminal Half of LRRK2 Bound to Gzd-824 (G2019S Mutant)
(pdb code 8tyq). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 3 binding sites of Fluorine where determined in the
Structure of the C-Terminal Half of LRRK2 Bound to Gzd-824 (G2019S Mutant), PDB code: 8tyq:
Jump to Fluorine binding site number:
1;
2;
3;
Fluorine binding site 1 out
of 3 in 8tyq
Go back to
Fluorine Binding Sites List in 8tyq
Fluorine binding site 1 out
of 3 in the Structure of the C-Terminal Half of LRRK2 Bound to Gzd-824 (G2019S Mutant)
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Structure of the C-Terminal Half of LRRK2 Bound to Gzd-824 (G2019S Mutant) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F2601
b:15.4
occ:1.00
|
F26
|
A:T3X2601
|
0.0
|
15.4
|
1.0
|
C25
|
A:T3X2601
|
1.3
|
8.8
|
1.0
|
F27
|
A:T3X2601
|
2.2
|
6.6
|
1.0
|
F28
|
A:T3X2601
|
2.2
|
29.1
|
1.0
|
C13
|
A:T3X2601
|
2.4
|
5.2
|
1.0
|
CE1
|
A:TYR1992
|
2.8
|
24.1
|
1.0
|
C14
|
A:T3X2601
|
3.1
|
9.7
|
1.0
|
C17
|
A:T3X2601
|
3.2
|
12.7
|
1.0
|
CD1
|
A:TYR1992
|
3.3
|
23.8
|
1.0
|
C12
|
A:T3X2601
|
3.3
|
8.6
|
1.0
|
C23
|
A:T3X2601
|
3.5
|
11.7
|
1.0
|
N18
|
A:T3X2601
|
3.6
|
13.5
|
1.0
|
C
|
A:ALA2016
|
3.7
|
27.9
|
1.0
|
CZ
|
A:TYR1992
|
3.9
|
22.9
|
1.0
|
CB
|
A:ASP2017
|
3.9
|
18.6
|
1.0
|
O
|
A:ALA2016
|
4.0
|
31.7
|
1.0
|
CA
|
A:ALA2016
|
4.0
|
22.1
|
1.0
|
N
|
A:ASP2017
|
4.0
|
28.6
|
1.0
|
CG1
|
A:ILE2015
|
4.0
|
25.9
|
1.0
|
O
|
A:ILE2015
|
4.1
|
21.7
|
1.0
|
N
|
A:ALA2016
|
4.2
|
21.9
|
1.0
|
OH
|
A:TYR1992
|
4.2
|
29.5
|
1.0
|
C
|
A:ILE2015
|
4.3
|
21.7
|
1.0
|
C15
|
A:T3X2601
|
4.4
|
7.6
|
1.0
|
CD1
|
A:ILE2015
|
4.5
|
24.3
|
1.0
|
C11
|
A:T3X2601
|
4.5
|
11.9
|
1.0
|
C22
|
A:T3X2601
|
4.6
|
7.1
|
1.0
|
CA
|
A:ASP2017
|
4.6
|
16.9
|
1.0
|
CG
|
A:TYR1992
|
4.6
|
20.3
|
1.0
|
CD1
|
A:LEU1985
|
4.6
|
18.6
|
1.0
|
CD2
|
A:LEU1932
|
4.8
|
16.2
|
1.0
|
C19
|
A:T3X2601
|
4.9
|
14.7
|
1.0
|
C16
|
A:T3X2601
|
4.9
|
5.7
|
1.0
|
CB
|
A:ILE2015
|
4.9
|
25.8
|
1.0
|
|
Fluorine binding site 2 out
of 3 in 8tyq
Go back to
Fluorine Binding Sites List in 8tyq
Fluorine binding site 2 out
of 3 in the Structure of the C-Terminal Half of LRRK2 Bound to Gzd-824 (G2019S Mutant)
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Structure of the C-Terminal Half of LRRK2 Bound to Gzd-824 (G2019S Mutant) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F2601
b:6.6
occ:1.00
|
F27
|
A:T3X2601
|
0.0
|
6.6
|
1.0
|
C25
|
A:T3X2601
|
1.3
|
8.8
|
1.0
|
F28
|
A:T3X2601
|
2.2
|
29.1
|
1.0
|
F26
|
A:T3X2601
|
2.2
|
15.4
|
1.0
|
C13
|
A:T3X2601
|
2.3
|
5.2
|
1.0
|
C12
|
A:T3X2601
|
2.6
|
8.6
|
1.0
|
O
|
A:ILE2015
|
2.7
|
21.7
|
1.0
|
CA
|
A:ALA2016
|
3.3
|
22.1
|
1.0
|
C
|
A:ILE2015
|
3.4
|
21.7
|
1.0
|
CG2
|
A:ILE1933
|
3.7
|
26.8
|
1.0
|
C14
|
A:T3X2601
|
3.7
|
9.7
|
1.0
|
N
|
A:ALA2016
|
3.7
|
21.9
|
1.0
|
C
|
A:ALA2016
|
3.9
|
27.9
|
1.0
|
C11
|
A:T3X2601
|
4.0
|
11.9
|
1.0
|
CG1
|
A:ILE2015
|
4.0
|
25.9
|
1.0
|
N
|
A:ASP2017
|
4.1
|
28.6
|
1.0
|
O09
|
A:T3X2601
|
4.1
|
9.8
|
1.0
|
N
|
A:ILE1933
|
4.2
|
14.3
|
1.0
|
CD2
|
A:LEU1932
|
4.3
|
16.2
|
1.0
|
C17
|
A:T3X2601
|
4.3
|
12.7
|
1.0
|
CB
|
A:ALA2016
|
4.5
|
19.8
|
1.0
|
O
|
A:ALA2016
|
4.6
|
31.7
|
1.0
|
CA
|
A:ILE2015
|
4.7
|
25.2
|
1.0
|
CB
|
A:ILE1933
|
4.7
|
22.4
|
1.0
|
CA
|
A:LEU1932
|
4.7
|
23.8
|
1.0
|
C15
|
A:T3X2601
|
4.7
|
7.6
|
1.0
|
CB
|
A:LEU1932
|
4.8
|
23.6
|
1.0
|
C08
|
A:T3X2601
|
4.8
|
5.7
|
1.0
|
N10
|
A:T3X2601
|
4.8
|
11.8
|
1.0
|
CE1
|
A:TYR1992
|
4.8
|
24.1
|
1.0
|
C16
|
A:T3X2601
|
4.8
|
5.7
|
1.0
|
CB
|
A:ILE2015
|
4.9
|
25.8
|
1.0
|
C
|
A:LEU1932
|
4.9
|
21.4
|
1.0
|
CD1
|
A:ILE2015
|
4.9
|
24.3
|
1.0
|
|
Fluorine binding site 3 out
of 3 in 8tyq
Go back to
Fluorine Binding Sites List in 8tyq
Fluorine binding site 3 out
of 3 in the Structure of the C-Terminal Half of LRRK2 Bound to Gzd-824 (G2019S Mutant)
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Structure of the C-Terminal Half of LRRK2 Bound to Gzd-824 (G2019S Mutant) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F2601
b:29.1
occ:1.00
|
F28
|
A:T3X2601
|
0.0
|
29.1
|
1.0
|
C25
|
A:T3X2601
|
1.3
|
8.8
|
1.0
|
F27
|
A:T3X2601
|
2.2
|
6.6
|
1.0
|
F26
|
A:T3X2601
|
2.2
|
15.4
|
1.0
|
C13
|
A:T3X2601
|
2.3
|
5.2
|
1.0
|
C17
|
A:T3X2601
|
2.8
|
12.7
|
1.0
|
C14
|
A:T3X2601
|
2.9
|
9.7
|
1.0
|
CD2
|
A:LEU1932
|
3.4
|
16.2
|
1.0
|
C12
|
A:T3X2601
|
3.4
|
8.6
|
1.0
|
N18
|
A:T3X2601
|
3.8
|
13.5
|
1.0
|
CD1
|
A:LEU1927
|
4.0
|
22.0
|
1.0
|
C15
|
A:T3X2601
|
4.2
|
7.6
|
1.0
|
CD2
|
A:LEU1985
|
4.3
|
25.4
|
1.0
|
C23
|
A:T3X2601
|
4.4
|
11.7
|
1.0
|
O
|
A:ILE2015
|
4.4
|
21.7
|
1.0
|
CG1
|
A:ILE2015
|
4.4
|
25.9
|
1.0
|
CD1
|
A:LEU1985
|
4.4
|
18.6
|
1.0
|
CG
|
A:LEU1932
|
4.5
|
16.4
|
1.0
|
CB
|
A:LEU1932
|
4.6
|
23.6
|
1.0
|
C11
|
A:T3X2601
|
4.6
|
11.9
|
1.0
|
CD1
|
A:ILE2015
|
4.8
|
24.3
|
1.0
|
CE1
|
A:TYR1992
|
4.8
|
24.1
|
1.0
|
CG
|
A:LEU1985
|
4.8
|
16.1
|
1.0
|
CD1
|
A:TYR1992
|
4.8
|
23.8
|
1.0
|
C19
|
A:T3X2601
|
4.9
|
14.7
|
1.0
|
C16
|
A:T3X2601
|
4.9
|
5.7
|
1.0
|
CD1
|
A:LEU1932
|
4.9
|
24.5
|
1.0
|
|
Reference:
A.Villagran-Suarez,
M.Sanz-Murillo,
S.Mathea,
J.Alegrio-Louro,
S.Reck-Peterson,
S.Knapp,
A.E.Leschziner.
Structure of the C-Terminal Half of LRRK2 Bound to Gzd-824 (G2019S Mutant) To Be Published.
Page generated: Sat Aug 3 00:42:55 2024
|