Fluorine in PDB 8tze: Structure of C-Terminal Half of LRRK2 Bound to Gzd-824
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Structure of C-Terminal Half of LRRK2 Bound to Gzd-824
(pdb code 8tze). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 3 binding sites of Fluorine where determined in the
Structure of C-Terminal Half of LRRK2 Bound to Gzd-824, PDB code: 8tze:
Jump to Fluorine binding site number:
1;
2;
3;
Fluorine binding site 1 out
of 3 in 8tze
Go back to
Fluorine Binding Sites List in 8tze
Fluorine binding site 1 out
of 3 in the Structure of C-Terminal Half of LRRK2 Bound to Gzd-824
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Structure of C-Terminal Half of LRRK2 Bound to Gzd-824 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F2601
b:69.0
occ:1.00
|
F26
|
A:T3X2601
|
0.0
|
69.0
|
1.0
|
C25
|
A:T3X2601
|
1.4
|
59.4
|
1.0
|
F27
|
A:T3X2601
|
2.2
|
54.1
|
1.0
|
F28
|
A:T3X2601
|
2.2
|
77.7
|
1.0
|
C13
|
A:T3X2601
|
2.4
|
45.3
|
1.0
|
C14
|
A:T3X2601
|
3.0
|
49.0
|
1.0
|
C17
|
A:T3X2601
|
3.0
|
46.4
|
1.0
|
CE1
|
A:TYR1992
|
3.1
|
60.3
|
1.0
|
CD1
|
A:TYR1992
|
3.1
|
67.8
|
1.0
|
C12
|
A:T3X2601
|
3.5
|
44.8
|
1.0
|
CD1
|
A:LEU1985
|
3.6
|
53.6
|
1.0
|
C23
|
A:T3X2601
|
3.8
|
60.0
|
1.0
|
N18
|
A:T3X2601
|
4.0
|
63.2
|
1.0
|
CD2
|
A:LEU1985
|
4.3
|
59.2
|
1.0
|
C15
|
A:T3X2601
|
4.3
|
60.3
|
1.0
|
CD2
|
A:LEU1932
|
4.4
|
52.6
|
1.0
|
CZ
|
A:TYR1992
|
4.4
|
66.3
|
1.0
|
CG2
|
A:ILE2015
|
4.4
|
50.6
|
1.0
|
O
|
A:ILE2015
|
4.5
|
61.8
|
1.0
|
CG
|
A:TYR1992
|
4.5
|
68.4
|
1.0
|
CG
|
A:LEU1985
|
4.5
|
56.3
|
1.0
|
CB
|
A:ASP2017
|
4.7
|
66.0
|
1.0
|
C11
|
A:T3X2601
|
4.7
|
54.1
|
1.0
|
C
|
A:ILE2015
|
4.8
|
54.5
|
1.0
|
CB
|
A:ILE2015
|
4.9
|
49.4
|
1.0
|
N
|
A:ASP2017
|
4.9
|
53.8
|
1.0
|
OH
|
A:TYR1992
|
5.0
|
80.3
|
1.0
|
C19
|
A:T3X2601
|
5.0
|
56.6
|
1.0
|
|
Fluorine binding site 2 out
of 3 in 8tze
Go back to
Fluorine Binding Sites List in 8tze
Fluorine binding site 2 out
of 3 in the Structure of C-Terminal Half of LRRK2 Bound to Gzd-824
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Structure of C-Terminal Half of LRRK2 Bound to Gzd-824 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F2601
b:54.1
occ:1.00
|
F27
|
A:T3X2601
|
0.0
|
54.1
|
1.0
|
C25
|
A:T3X2601
|
1.4
|
59.4
|
1.0
|
F26
|
A:T3X2601
|
2.2
|
69.0
|
1.0
|
F28
|
A:T3X2601
|
2.2
|
77.7
|
1.0
|
C13
|
A:T3X2601
|
2.4
|
45.3
|
1.0
|
C12
|
A:T3X2601
|
2.7
|
44.8
|
1.0
|
O
|
A:ILE2015
|
3.0
|
61.8
|
1.0
|
C14
|
A:T3X2601
|
3.7
|
49.0
|
1.0
|
C
|
A:ILE2015
|
3.9
|
54.5
|
1.0
|
CB
|
A:LEU1932
|
4.0
|
53.2
|
1.0
|
CD2
|
A:LEU1932
|
4.0
|
52.6
|
1.0
|
C11
|
A:T3X2601
|
4.0
|
54.1
|
1.0
|
CA
|
A:ALA2016
|
4.2
|
54.5
|
1.0
|
CG2
|
A:ILE1933
|
4.3
|
62.0
|
1.0
|
O09
|
A:T3X2601
|
4.3
|
52.1
|
1.0
|
N
|
A:ALA2016
|
4.4
|
50.5
|
1.0
|
CG
|
A:LEU1932
|
4.4
|
58.6
|
1.0
|
C17
|
A:T3X2601
|
4.4
|
46.4
|
1.0
|
N
|
A:ILE1933
|
4.5
|
48.9
|
1.0
|
CA
|
A:LEU1932
|
4.5
|
50.0
|
1.0
|
N
|
A:ASP2017
|
4.5
|
53.8
|
1.0
|
CE1
|
A:TYR1992
|
4.6
|
60.3
|
1.0
|
CD1
|
A:LEU1932
|
4.6
|
55.6
|
1.0
|
C
|
A:ALA2016
|
4.7
|
53.7
|
1.0
|
C15
|
A:T3X2601
|
4.8
|
60.3
|
1.0
|
CB
|
A:ILE2015
|
4.8
|
49.4
|
1.0
|
CG2
|
A:ILE2015
|
4.9
|
50.6
|
1.0
|
C16
|
A:T3X2601
|
4.9
|
55.6
|
1.0
|
CA
|
A:ILE2015
|
4.9
|
47.0
|
1.0
|
N10
|
A:T3X2601
|
4.9
|
54.5
|
1.0
|
C
|
A:LEU1932
|
4.9
|
58.4
|
1.0
|
|
Fluorine binding site 3 out
of 3 in 8tze
Go back to
Fluorine Binding Sites List in 8tze
Fluorine binding site 3 out
of 3 in the Structure of C-Terminal Half of LRRK2 Bound to Gzd-824
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Structure of C-Terminal Half of LRRK2 Bound to Gzd-824 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F2601
b:77.7
occ:1.00
|
F28
|
A:T3X2601
|
0.0
|
77.7
|
1.0
|
C25
|
A:T3X2601
|
1.4
|
59.4
|
1.0
|
F27
|
A:T3X2601
|
2.2
|
54.1
|
1.0
|
F26
|
A:T3X2601
|
2.2
|
69.0
|
1.0
|
C13
|
A:T3X2601
|
2.4
|
45.3
|
1.0
|
C14
|
A:T3X2601
|
3.1
|
49.0
|
1.0
|
C17
|
A:T3X2601
|
3.2
|
46.4
|
1.0
|
C12
|
A:T3X2601
|
3.4
|
44.8
|
1.0
|
CD1
|
A:LEU1927
|
3.5
|
67.0
|
1.0
|
CD1
|
A:LEU1932
|
3.6
|
55.6
|
1.0
|
CD2
|
A:LEU1985
|
3.7
|
59.2
|
1.0
|
CD2
|
A:LEU1932
|
4.0
|
52.6
|
1.0
|
CG
|
A:LEU1932
|
4.2
|
58.6
|
1.0
|
CB
|
A:LEU1932
|
4.2
|
53.2
|
1.0
|
CD1
|
A:LEU1985
|
4.3
|
53.6
|
1.0
|
C15
|
A:T3X2601
|
4.3
|
60.3
|
1.0
|
CG
|
A:LEU1985
|
4.5
|
56.3
|
1.0
|
N18
|
A:T3X2601
|
4.5
|
63.2
|
1.0
|
C11
|
A:T3X2601
|
4.6
|
54.1
|
1.0
|
CG
|
A:LEU1927
|
4.8
|
66.2
|
1.0
|
CB
|
A:LEU1927
|
5.0
|
62.2
|
1.0
|
C23
|
A:T3X2601
|
5.0
|
60.0
|
1.0
|
C16
|
A:T3X2601
|
5.0
|
55.6
|
1.0
|
|
Reference:
A.Villagran-Suarez,
M.Sanz-Murillo,
J.Alegrio-Louro,
A.Leschziner.
Structure of C-Terminal Half of LRRK2 Bound to Gzd-824 To Be Published.
Page generated: Sat Aug 3 00:45:34 2024
|