Fluorine in PDB 8tzf: Structure of Full Length LRRK2 Bound to Gzd-824 (I2020T Mutant)

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Structure of Full Length LRRK2 Bound to Gzd-824 (I2020T Mutant) (pdb code 8tzf). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 3 binding sites of Fluorine where determined in the Structure of Full Length LRRK2 Bound to Gzd-824 (I2020T Mutant), PDB code: 8tzf:
Jump to Fluorine binding site number: 1; 2; 3;

Fluorine binding site 1 out of 3 in 8tzf

Go back to Fluorine Binding Sites List in 8tzf
Fluorine binding site 1 out of 3 in the Structure of Full Length LRRK2 Bound to Gzd-824 (I2020T Mutant)


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Structure of Full Length LRRK2 Bound to Gzd-824 (I2020T Mutant) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F2602

b:107.1
occ:1.00
F26 A:T3X2602 0.0 107.1 1.0
C25 A:T3X2602 1.4 102.8 1.0
F27 A:T3X2602 2.2 102.6 1.0
F28 A:T3X2602 2.2 103.4 1.0
C13 A:T3X2602 2.4 102.9 1.0
C12 A:T3X2602 2.7 102.7 1.0
CD2 A:LEU1932 3.2 57.0 1.0
C14 A:T3X2602 3.7 103.2 1.0
O A:ILE2015 4.0 50.2 1.0
C11 A:T3X2602 4.0 98.4 1.0
CG2 A:ILE1933 4.1 41.1 1.0
C A:ILE2015 4.3 42.4 1.0
C17 A:T3X2602 4.4 100.7 1.0
CA A:ALA2016 4.4 37.6 1.0
N A:ALA2016 4.5 47.5 1.0
N A:ILE1933 4.5 35.4 1.0
CG A:LEU1932 4.6 46.2 1.0
CB A:ILE2015 4.6 28.8 1.0
O09 A:T3X2602 4.6 99.5 1.0
N A:ASP2017 4.8 69.3 1.0
C15 A:T3X2602 4.8 105.7 1.0
C A:ALA2016 4.8 55.5 1.0
N10 A:T3X2602 4.9 94.6 1.0
C16 A:T3X2602 4.9 102.1 1.0
CB A:LEU1932 4.9 37.9 1.0
CE2 A:TYR1992 4.9 78.6 1.0
CB A:ILE1933 5.0 34.2 1.0
O A:ILE1933 5.0 68.9 1.0

Fluorine binding site 2 out of 3 in 8tzf

Go back to Fluorine Binding Sites List in 8tzf
Fluorine binding site 2 out of 3 in the Structure of Full Length LRRK2 Bound to Gzd-824 (I2020T Mutant)


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Structure of Full Length LRRK2 Bound to Gzd-824 (I2020T Mutant) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F2602

b:102.6
occ:1.00
F27 A:T3X2602 0.0 102.6 1.0
C25 A:T3X2602 1.4 102.8 1.0
F26 A:T3X2602 2.2 107.1 1.0
F28 A:T3X2602 2.2 103.4 1.0
C13 A:T3X2602 2.4 102.9 1.0
C14 A:T3X2602 3.0 103.2 1.0
C17 A:T3X2602 3.0 100.7 1.0
CD2 A:LEU1932 3.2 57.0 1.0
CD1 A:LEU1927 3.2 81.0 1.0
C12 A:T3X2602 3.5 102.7 1.0
CD2 A:LEU1985 4.1 72.2 1.0
CD1 A:LEU1932 4.2 51.1 1.0
CG A:LEU1932 4.3 46.2 1.0
C15 A:T3X2602 4.3 105.7 1.0
N18 A:T3X2602 4.3 104.0 1.0
CD1 A:LEU1985 4.4 70.1 1.0
CG A:LEU1927 4.6 74.0 1.0
CG A:LEU1985 4.7 64.8 1.0
C11 A:T3X2602 4.7 98.4 1.0
C23 A:T3X2602 4.7 104.9 1.0
CB A:LEU1927 4.8 73.9 1.0
C19 A:T3X2602 4.9 107.8 1.0
C16 A:T3X2602 5.0 102.1 1.0
CB A:LEU1932 5.0 37.9 1.0

Fluorine binding site 3 out of 3 in 8tzf

Go back to Fluorine Binding Sites List in 8tzf
Fluorine binding site 3 out of 3 in the Structure of Full Length LRRK2 Bound to Gzd-824 (I2020T Mutant)


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Structure of Full Length LRRK2 Bound to Gzd-824 (I2020T Mutant) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F2602

b:103.4
occ:1.00
F28 A:T3X2602 0.0 103.4 1.0
C25 A:T3X2602 1.4 102.8 1.0
F26 A:T3X2602 2.2 107.1 1.0
F27 A:T3X2602 2.2 102.6 1.0
C13 A:T3X2602 2.4 102.9 1.0
C14 A:T3X2602 3.1 103.2 1.0
C17 A:T3X2602 3.1 100.7 1.0
CE2 A:TYR1992 3.1 78.6 1.0
C12 A:T3X2602 3.4 102.7 1.0
CD2 A:TYR1992 3.6 79.8 1.0
C23 A:T3X2602 3.8 104.9 1.0
CD2 A:LEU1932 4.0 57.0 1.0
N18 A:T3X2602 4.0 104.0 1.0
CD1 A:LEU1985 4.1 70.1 1.0
CB A:ASP2017 4.2 71.0 1.0
CZ A:TYR1992 4.3 76.5 1.0
C15 A:T3X2602 4.3 105.7 1.0
OH A:TYR1992 4.6 72.8 1.0
C11 A:T3X2602 4.6 98.4 1.0
CG2 A:ILE2015 4.7 42.2 1.0
N A:ASP2017 4.8 69.3 1.0
CB A:ILE2015 4.8 28.8 1.0
C A:ALA2016 4.8 55.5 1.0
CG A:TYR1992 5.0 74.0 1.0
C16 A:T3X2602 5.0 102.1 1.0
C19 A:T3X2602 5.0 107.8 1.0

Reference:

A.Villagran-Suarez, M.Sanz-Murillo, J.Alegrio-Louro, A.Leschziner. Structure of Full Length LRRK2 Bound to Gzd-824 (I2020T Mutant) To Be Published.
Page generated: Sat Aug 3 00:45:56 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy