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Fluorine in PDB 9es4: Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex

Enzymatic activity of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex

All present enzymatic activity of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex:
3.6.4.9;

Other elements in 9es4:

The structure of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex also contains other interesting chemical elements:

Potassium (K) 14 atoms
Magnesium (Mg) 14 atoms

Fluorine Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 42;

Binding sites:

The binding sites of Fluorine atom in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex (pdb code 9es4). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 42 binding sites of Fluorine where determined in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex, PDB code: 9es4:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Fluorine binding site 1 out of 42 in 9es4

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Fluorine binding site 1 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F602

b:40.5
occ:1.00
F1 A:BEF602 0.0 40.5 1.0
BE A:BEF602 1.5 26.7 1.0
MG A:MG603 2.0 15.4 1.0
O1B A:ADP601 2.2 15.1 1.0
OD1 A:ASP87 2.5 47.9 1.0
F3 A:BEF602 2.5 37.9 1.0
F2 A:BEF602 2.6 22.4 1.0
O2A A:ADP601 3.0 29.6 1.0
OD2 A:ASP399 3.3 40.3 1.0
PB A:ADP601 3.3 25.8 1.0
O3B A:ADP601 3.4 22.4 1.0
CG A:ASP87 3.6 38.9 1.0
PA A:ADP601 3.9 18.0 1.0
CG A:ASP399 3.9 41.9 1.0
OD2 A:ASP87 4.0 39.3 1.0
O3A A:ADP601 4.0 26.9 1.0
N A:GLY88 4.2 17.9 1.0
K A:K604 4.4 21.6 1.0
O1A A:ADP601 4.5 24.1 1.0
OD1 A:ASP52 4.5 42.9 1.0
OD1 A:ASP399 4.5 40.7 1.0
O2B A:ADP601 4.6 37.6 1.0
CB A:ASP399 4.6 32.3 1.0
CB A:ASP87 4.8 22.6 1.0
CA A:ASP87 4.8 18.0 1.0
OG1 A:THR89 4.8 33.1 1.0

Fluorine binding site 2 out of 42 in 9es4

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Fluorine binding site 2 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F602

b:22.4
occ:1.00
F2 A:BEF602 0.0 22.4 1.0
BE A:BEF602 1.6 26.7 1.0
O1B A:ADP601 2.2 15.1 1.0
F3 A:BEF602 2.5 37.9 1.0
F1 A:BEF602 2.6 40.5 1.0
K A:K604 3.0 21.6 1.0
N A:GLY53 3.0 11.9 1.0
OG1 A:THR89 3.1 33.1 1.0
OG1 A:THR90 3.3 20.6 1.0
PB A:ADP601 3.7 25.8 1.0
OD1 A:ASP52 3.9 42.9 1.0
CA A:GLY53 3.9 11.7 1.0
CA A:ASP52 3.9 14.3 1.0
C A:ASP52 3.9 19.9 1.0
N A:THR90 4.1 14.1 1.0
O A:LYS51 4.1 31.5 1.0
O3A A:ADP601 4.2 26.9 1.0
CG A:ASP52 4.3 39.4 1.0
OD2 A:ASP399 4.4 40.3 1.0
CB A:THR90 4.4 13.0 1.0
O2B A:ADP601 4.4 37.6 1.0
N A:THR89 4.4 28.3 1.0
CB A:THR89 4.4 19.2 1.0
O2A A:ADP601 4.5 29.6 1.0
O1A A:ADP601 4.5 24.1 1.0
MG A:MG603 4.5 15.4 1.0
OD1 A:ASP87 4.6 47.9 1.0
PA A:ADP601 4.6 18.0 1.0
O3B A:ADP601 4.7 22.4 1.0
CB A:ASP52 4.8 20.7 1.0
CA A:THR89 4.8 14.9 1.0
CA A:THR90 4.9 16.3 1.0
C A:THR89 4.9 18.8 1.0
N A:ASP52 4.9 26.6 1.0
C A:LYS51 5.0 23.0 1.0
OD2 A:ASP52 5.0 38.8 1.0

Fluorine binding site 3 out of 42 in 9es4

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Fluorine binding site 3 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F602

b:37.9
occ:1.00
F3 A:BEF602 0.0 37.9 1.0
BE A:BEF602 1.5 26.7 1.0
F2 A:BEF602 2.5 22.4 1.0
F1 A:BEF602 2.5 40.5 1.0
OD1 A:ASP52 2.7 42.9 1.0
OD2 A:ASP399 2.7 40.3 1.0
OD1 A:ASP87 3.2 47.9 1.0
OD1 A:ASP399 3.2 40.7 1.0
CG A:ASP399 3.3 41.9 1.0
OG1 A:THR89 3.5 33.1 1.0
CG A:ASP52 3.5 39.4 1.0
O1B A:ADP601 3.6 15.1 1.0
OD2 A:ASP52 3.9 38.8 1.0
MG A:MG603 4.2 15.4 1.0
CA A:ASP87 4.3 18.0 1.0
CG A:ASP87 4.4 38.9 1.0
N A:GLY53 4.4 11.9 1.0
N A:GLY88 4.5 17.9 1.0
CA A:ASP52 4.6 14.3 1.0
CB A:ASP399 4.6 32.3 1.0
CB A:THR89 4.6 19.2 1.0
CB A:ASP52 4.6 20.7 1.0
N A:THR89 4.6 28.3 1.0
CG2 A:THR89 4.7 13.4 1.0
O A:GLY86 4.7 33.1 1.0
C A:ASP87 4.8 25.6 1.0
CB A:ASP87 4.9 22.6 1.0
PB A:ADP601 5.0 25.8 1.0

Fluorine binding site 4 out of 42 in 9es4

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Fluorine binding site 4 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F602

b:43.7
occ:1.00
F1 B:BEF602 0.0 43.7 1.0
BE B:BEF602 1.5 29.6 1.0
MG B:MG603 2.1 12.0 1.0
O1B B:ADP601 2.2 19.4 1.0
OD1 B:ASP87 2.5 41.9 1.0
F3 B:BEF602 2.5 40.0 1.0
F2 B:BEF602 2.6 20.5 1.0
O2A B:ADP601 3.1 22.5 1.0
OD2 B:ASP399 3.2 44.5 1.0
PB B:ADP601 3.3 25.5 1.0
O3B B:ADP601 3.5 19.8 1.0
CG B:ASP87 3.6 37.9 1.0
CG B:ASP399 3.9 46.0 1.0
PA B:ADP601 4.0 18.8 1.0
O3A B:ADP601 4.1 28.6 1.0
N B:GLY88 4.1 19.0 1.0
OD2 B:ASP87 4.1 40.1 1.0
OD1 B:ASP52 4.4 43.7 1.0
K B:K604 4.4 31.0 1.0
OD1 B:ASP399 4.4 43.7 1.0
O1A B:ADP601 4.6 26.9 1.0
O2B B:ADP601 4.6 37.5 1.0
CB B:ASP399 4.7 35.3 1.0
CA B:ASP87 4.7 21.1 1.0
CB B:ASP87 4.8 24.1 1.0
OG1 B:THR89 4.8 27.4 1.0
C B:ASP87 4.9 27.2 1.0
CA B:GLY88 5.0 15.7 1.0
N B:THR89 5.0 28.8 1.0

Fluorine binding site 5 out of 42 in 9es4

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Fluorine binding site 5 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F602

b:20.5
occ:1.00
F2 B:BEF602 0.0 20.5 1.0
BE B:BEF602 1.6 29.6 1.0
O1B B:ADP601 2.2 19.4 1.0
F3 B:BEF602 2.5 40.0 1.0
F1 B:BEF602 2.6 43.7 1.0
N B:GLY53 3.0 14.9 1.0
OG1 B:THR89 3.1 27.4 1.0
K B:K604 3.1 31.0 1.0
OG1 B:THR90 3.2 19.4 1.0
PB B:ADP601 3.7 25.5 1.0
CA B:GLY53 3.8 6.7 1.0
OD1 B:ASP52 3.9 43.7 1.0
CA B:ASP52 3.9 14.7 1.0
C B:ASP52 3.9 22.2 1.0
N B:THR90 4.0 10.6 1.0
O3A B:ADP601 4.2 28.6 1.0
O B:LYS51 4.2 31.4 1.0
CB B:THR90 4.3 9.8 1.0
CG B:ASP52 4.3 40.8 1.0
N B:THR89 4.4 28.8 1.0
O2B B:ADP601 4.4 37.5 1.0
CB B:THR89 4.5 17.7 1.0
OD2 B:ASP399 4.5 44.5 1.0
O2A B:ADP601 4.6 22.5 1.0
MG B:MG603 4.6 12.0 1.0
PA B:ADP601 4.7 18.8 1.0
OD1 B:ASP87 4.7 41.9 1.0
O1A B:ADP601 4.7 26.9 1.0
O3B B:ADP601 4.7 19.8 1.0
CB B:ASP52 4.7 20.3 1.0
CA B:THR90 4.8 13.2 1.0
CA B:THR89 4.8 17.1 1.0
C B:THR89 4.8 16.1 1.0
N B:VAL54 4.9 25.3 1.0
C B:GLY53 4.9 18.1 1.0
OD2 B:ASP52 4.9 40.4 1.0
N B:ASP52 4.9 27.3 1.0

Fluorine binding site 6 out of 42 in 9es4

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Fluorine binding site 6 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 6 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F602

b:40.0
occ:1.00
F3 B:BEF602 0.0 40.0 1.0
BE B:BEF602 1.5 29.6 1.0
F2 B:BEF602 2.5 20.5 1.0
F1 B:BEF602 2.5 43.7 1.0
OD1 B:ASP52 2.7 43.7 1.0
OD2 B:ASP399 2.9 44.5 1.0
OD1 B:ASP399 3.3 43.7 1.0
OD1 B:ASP87 3.3 41.9 1.0
OG1 B:THR89 3.4 27.4 1.0
CG B:ASP399 3.4 46.0 1.0
CG B:ASP52 3.5 40.8 1.0
O1B B:ADP601 3.6 19.4 1.0
OD2 B:ASP52 3.8 40.4 1.0
CA B:ASP87 4.3 21.1 1.0
N B:GLY53 4.3 14.9 1.0
MG B:MG603 4.4 12.0 1.0
N B:GLY88 4.5 19.0 1.0
CG B:ASP87 4.5 37.9 1.0
CB B:THR89 4.6 17.7 1.0
N B:THR89 4.6 28.8 1.0
CA B:ASP52 4.6 14.7 1.0
CG2 B:THR89 4.6 15.7 1.0
CB B:ASP52 4.6 20.3 1.0
O B:GLY86 4.7 35.4 1.0
C B:ASP87 4.8 27.2 1.0
CB B:ASP399 4.8 35.3 1.0
C B:ASP52 5.0 22.2 1.0
PB B:ADP601 5.0 25.5 1.0
CB B:ASP87 5.0 24.1 1.0

Fluorine binding site 7 out of 42 in 9es4

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Fluorine binding site 7 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 7 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F602

b:40.8
occ:1.00
F1 C:BEF602 0.0 40.8 1.0
BE C:BEF602 1.5 30.5 1.0
MG C:MG603 2.1 19.4 1.0
O1B C:ADP601 2.3 21.4 1.0
OD1 C:ASP87 2.5 45.8 1.0
F3 C:BEF602 2.5 43.1 1.0
F2 C:BEF602 2.6 19.7 1.0
O2A C:ADP601 3.0 33.8 1.0
OD2 C:ASP399 3.2 41.7 1.0
PB C:ADP601 3.4 23.0 1.0
O3B C:ADP601 3.5 33.7 1.0
CG C:ASP87 3.6 37.5 1.0
CG C:ASP399 3.9 45.2 1.0
PA C:ADP601 4.0 15.7 1.0
OD2 C:ASP87 4.1 38.7 1.0
O3A C:ADP601 4.1 32.6 1.0
N C:GLY88 4.2 18.0 1.0
K C:K604 4.4 30.9 1.0
OD1 C:ASP52 4.5 43.0 1.0
OD1 C:ASP399 4.5 43.0 1.0
O1A C:ADP601 4.5 31.6 1.0
CB C:ASP399 4.6 33.1 1.0
O2B C:ADP601 4.7 41.5 1.0
CA C:ASP87 4.7 19.4 1.0
CB C:ASP87 4.7 21.9 1.0
OG1 C:THR89 4.8 35.2 1.0
N C:THR89 5.0 31.7 1.0
CA C:GLY88 5.0 18.8 1.0
C C:ASP87 5.0 25.9 1.0

Fluorine binding site 8 out of 42 in 9es4

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Fluorine binding site 8 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 8 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F602

b:19.7
occ:1.00
F2 C:BEF602 0.0 19.7 1.0
BE C:BEF602 1.6 30.5 1.0
O1B C:ADP601 2.2 21.4 1.0
F3 C:BEF602 2.5 43.1 1.0
F1 C:BEF602 2.6 40.8 1.0
OG1 C:THR89 3.0 35.2 1.0
K C:K604 3.0 30.9 1.0
N C:GLY53 3.1 18.0 1.0
OG1 C:THR90 3.3 21.3 1.0
PB C:ADP601 3.6 23.0 1.0
CA C:GLY53 3.9 11.8 1.0
OD1 C:ASP52 3.9 43.0 1.0
CA C:ASP52 3.9 13.5 1.0
C C:ASP52 4.0 23.6 1.0
N C:THR90 4.0 15.8 1.0
O C:LYS51 4.1 31.5 1.0
O3A C:ADP601 4.2 32.6 1.0
N C:THR89 4.3 31.7 1.0
CB C:THR89 4.3 21.3 1.0
CB C:THR90 4.3 17.0 1.0
O2B C:ADP601 4.4 41.5 1.0
CG C:ASP52 4.4 40.0 1.0
OD2 C:ASP399 4.4 41.7 1.0
O2A C:ADP601 4.5 33.8 1.0
O1A C:ADP601 4.5 31.6 1.0
PA C:ADP601 4.6 15.7 1.0
OD1 C:ASP87 4.6 45.8 1.0
MG C:MG603 4.6 19.4 1.0
O3B C:ADP601 4.6 33.7 1.0
CA C:THR89 4.7 17.5 1.0
CB C:ASP52 4.8 18.9 1.0
CA C:THR90 4.8 15.3 1.0
C C:THR89 4.8 18.5 1.0
N C:ASP52 4.9 23.6 1.0
C C:LYS51 5.0 21.4 1.0

Fluorine binding site 9 out of 42 in 9es4

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Fluorine binding site 9 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 9 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F602

b:43.1
occ:1.00
F3 C:BEF602 0.0 43.1 1.0
BE C:BEF602 1.5 30.5 1.0
F2 C:BEF602 2.5 19.7 1.0
F1 C:BEF602 2.5 40.8 1.0
OD1 C:ASP52 2.8 43.0 1.0
OD2 C:ASP399 2.9 41.7 1.0
OD1 C:ASP87 3.2 45.8 1.0
OG1 C:THR89 3.3 35.2 1.0
OD1 C:ASP399 3.3 43.0 1.0
CG C:ASP399 3.4 45.2 1.0
O1B C:ADP601 3.6 21.4 1.0
CG C:ASP52 3.6 40.0 1.0
OD2 C:ASP52 3.9 40.6 1.0
CA C:ASP87 4.2 19.4 1.0
CG C:ASP87 4.4 37.5 1.0
N C:GLY53 4.4 18.0 1.0
N C:GLY88 4.4 18.0 1.0
MG C:MG603 4.4 19.4 1.0
CB C:THR89 4.4 21.3 1.0
CG2 C:THR89 4.5 16.8 1.0
N C:THR89 4.5 31.7 1.0
CA C:ASP52 4.6 13.5 1.0
CB C:ASP52 4.7 18.9 1.0
O C:GLY86 4.7 35.4 1.0
C C:ASP87 4.7 25.9 1.0
CB C:ASP399 4.7 33.1 1.0
CB C:ASP87 4.9 21.9 1.0
PB C:ADP601 4.9 23.0 1.0

Fluorine binding site 10 out of 42 in 9es4

Go back to Fluorine Binding Sites List in 9es4
Fluorine binding site 10 out of 42 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 10 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
D:F602

b:41.6
occ:1.00
F1 D:BEF602 0.0 41.6 1.0
BE D:BEF602 1.5 29.9 1.0
MG D:MG603 2.2 11.7 1.0
O1B D:ADP601 2.3 20.4 1.0
OD1 D:ASP87 2.5 41.3 1.0
F3 D:BEF602 2.5 41.8 1.0
F2 D:BEF602 2.6 24.4 1.0
O2A D:ADP601 3.1 29.2 1.0
OD2 D:ASP399 3.2 40.9 1.0
PB D:ADP601 3.4 22.8 1.0
O3B D:ADP601 3.5 23.6 1.0
CG D:ASP87 3.6 37.6 1.0
CG D:ASP399 3.9 44.4 1.0
PA D:ADP601 4.0 16.3 1.0
O3A D:ADP601 4.1 26.8 1.0
OD2 D:ASP87 4.1 40.1 1.0
N D:GLY88 4.2 18.2 1.0
K D:K604 4.4 32.1 1.0
OD1 D:ASP52 4.4 43.7 1.0
OD1 D:ASP399 4.4 40.5 1.0
O1A D:ADP601 4.5 20.8 1.0
CB D:ASP399 4.6 35.7 1.0
O2B D:ADP601 4.7 38.9 1.0
CA D:ASP87 4.7 19.9 1.0
CB D:ASP87 4.7 25.7 1.0
OG1 D:THR89 4.8 33.1 1.0

Reference:

I.Tascon, J.P.Lopez-Alonso, I.Ubarretxena-Belandia, J.Vilchez, Y.Shkolnisky, A.Azem, J.Hirsch. Structural Basis For Atp-Triggered Assembly of Human Mitochondrial HSP60-HSP10 Chaperonin To Be Published.
Page generated: Wed Jul 16 11:09:47 2025

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