Fluorine in PDB 9mel: Structure of the Human Twik-2 Potassium Channel in Complex with Pimozide
Other elements in 9mel:
The structure of Structure of the Human Twik-2 Potassium Channel in Complex with Pimozide also contains other interesting chemical elements:
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Structure of the Human Twik-2 Potassium Channel in Complex with Pimozide
(pdb code 9mel). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 4 binding sites of Fluorine where determined in the
Structure of the Human Twik-2 Potassium Channel in Complex with Pimozide, PDB code: 9mel:
Jump to Fluorine binding site number:
1;
2;
3;
4;
Fluorine binding site 1 out
of 4 in 9mel
Go back to
Fluorine Binding Sites List in 9mel
Fluorine binding site 1 out
of 4 in the Structure of the Human Twik-2 Potassium Channel in Complex with Pimozide
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Structure of the Human Twik-2 Potassium Channel in Complex with Pimozide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F401
b:46.2
occ:0.50
|
F01
|
B:1II401
|
0.0
|
46.2
|
0.5
|
C33
|
B:1II401
|
1.4
|
44.8
|
0.5
|
C19
|
B:1II401
|
2.3
|
43.8
|
0.5
|
C23
|
B:1II401
|
2.3
|
45.5
|
0.5
|
C31
|
B:1II401
|
2.3
|
42.8
|
0.5
|
C29
|
B:1II401
|
2.4
|
46.0
|
0.5
|
CG2
|
B:VAL250
|
3.0
|
41.2
|
1.0
|
CD2
|
B:LEU246
|
3.4
|
42.6
|
1.0
|
CD1
|
B:LEU138
|
3.5
|
36.9
|
1.0
|
C27
|
B:1II401
|
3.6
|
43.1
|
0.5
|
C25
|
B:1II401
|
3.6
|
46.6
|
0.5
|
C24
|
B:1II401
|
3.6
|
46.2
|
0.5
|
C14
|
B:1II401
|
3.6
|
44.4
|
0.5
|
O
|
B:LEU246
|
3.9
|
37.2
|
1.0
|
C20
|
B:1II401
|
4.1
|
45.6
|
0.5
|
CB
|
B:VAL250
|
4.4
|
42.9
|
1.0
|
CB
|
B:LEU246
|
4.5
|
27.5
|
1.0
|
CG
|
B:LEU246
|
4.6
|
36.3
|
1.0
|
N05
|
B:1II401
|
4.6
|
45.2
|
0.5
|
C18
|
B:1II401
|
4.6
|
45.2
|
0.5
|
C09
|
B:1II401
|
4.6
|
41.0
|
0.5
|
C
|
B:LEU246
|
4.6
|
33.5
|
1.0
|
C22
|
B:1II401
|
4.6
|
46.1
|
0.5
|
C07
|
B:1II401
|
4.7
|
43.8
|
0.5
|
N
|
B:VAL250
|
4.8
|
42.9
|
1.0
|
CA
|
B:LEU246
|
4.8
|
28.6
|
1.0
|
CG
|
B:LEU138
|
4.8
|
37.0
|
1.0
|
CA
|
B:VAL250
|
4.9
|
42.2
|
1.0
|
CB
|
B:LEU138
|
4.9
|
32.7
|
1.0
|
C10
|
B:1II401
|
5.0
|
44.0
|
0.5
|
CG2
|
B:THR214
|
5.0
|
31.9
|
1.0
|
|
Fluorine binding site 2 out
of 4 in 9mel
Go back to
Fluorine Binding Sites List in 9mel
Fluorine binding site 2 out
of 4 in the Structure of the Human Twik-2 Potassium Channel in Complex with Pimozide
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Structure of the Human Twik-2 Potassium Channel in Complex with Pimozide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F401
b:46.2
occ:0.50
|
F01
|
B:1II401
|
0.0
|
46.2
|
0.5
|
C33
|
B:1II401
|
1.4
|
44.7
|
0.5
|
C19
|
B:1II401
|
2.2
|
43.9
|
0.5
|
C31
|
B:1II401
|
2.3
|
43.0
|
0.5
|
C29
|
B:1II401
|
2.4
|
45.5
|
0.5
|
C23
|
B:1II401
|
2.4
|
45.2
|
0.5
|
CG2
|
A:VAL250
|
3.0
|
41.2
|
1.0
|
CD1
|
A:LEU138
|
3.5
|
36.1
|
1.0
|
C14
|
B:1II401
|
3.5
|
44.3
|
0.5
|
C27
|
B:1II401
|
3.6
|
43.0
|
0.5
|
C25
|
B:1II401
|
3.6
|
46.3
|
0.5
|
C24
|
B:1II401
|
3.8
|
45.8
|
0.5
|
CD2
|
A:LEU246
|
3.8
|
42.8
|
1.0
|
C20
|
B:1II401
|
4.1
|
45.6
|
0.5
|
O
|
A:LEU246
|
4.2
|
36.3
|
1.0
|
N05
|
B:1II401
|
4.4
|
44.7
|
0.5
|
CB
|
A:VAL250
|
4.4
|
42.5
|
1.0
|
C07
|
B:1II401
|
4.5
|
43.1
|
0.5
|
C18
|
B:1II401
|
4.6
|
45.2
|
0.5
|
SD
|
A:MET135
|
4.7
|
51.7
|
0.5
|
C22
|
B:1II401
|
4.7
|
46.0
|
0.5
|
CG
|
A:LEU138
|
4.8
|
36.6
|
1.0
|
C09
|
B:1II401
|
4.8
|
41.4
|
0.5
|
CB
|
A:LEU246
|
4.8
|
26.9
|
1.0
|
CB
|
A:LEU138
|
4.8
|
32.0
|
1.0
|
N
|
A:VAL250
|
4.9
|
42.6
|
1.0
|
C10
|
B:1II401
|
4.9
|
43.4
|
0.5
|
CA
|
A:VAL250
|
4.9
|
42.1
|
1.0
|
C
|
A:LEU246
|
5.0
|
32.9
|
1.0
|
CG
|
A:LEU246
|
5.0
|
36.2
|
1.0
|
|
Fluorine binding site 3 out
of 4 in 9mel
Go back to
Fluorine Binding Sites List in 9mel
Fluorine binding site 3 out
of 4 in the Structure of the Human Twik-2 Potassium Channel in Complex with Pimozide
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Structure of the Human Twik-2 Potassium Channel in Complex with Pimozide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F401
b:53.6
occ:0.50
|
F02
|
B:1II401
|
0.0
|
53.6
|
0.5
|
C34
|
B:1II401
|
1.4
|
48.1
|
0.5
|
C32
|
B:1II401
|
2.3
|
44.0
|
0.5
|
C30
|
B:1II401
|
2.3
|
48.9
|
0.5
|
C28
|
B:1II401
|
3.6
|
43.8
|
0.5
|
C26
|
B:1II401
|
3.6
|
46.4
|
0.5
|
C21
|
B:1II401
|
4.1
|
45.1
|
0.5
|
CG
|
A:PRO132
|
4.3
|
53.8
|
1.0
|
CD1
|
A:LEU128
|
4.5
|
56.3
|
1.0
|
CD2
|
B:LEU253
|
4.7
|
46.9
|
1.0
|
CD
|
A:PRO132
|
4.9
|
47.5
|
1.0
|
O
|
A:LEU128
|
4.9
|
55.2
|
1.0
|
|
Fluorine binding site 4 out
of 4 in 9mel
Go back to
Fluorine Binding Sites List in 9mel
Fluorine binding site 4 out
of 4 in the Structure of the Human Twik-2 Potassium Channel in Complex with Pimozide
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Structure of the Human Twik-2 Potassium Channel in Complex with Pimozide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F401
b:52.7
occ:0.50
|
F02
|
B:1II401
|
0.0
|
52.7
|
0.5
|
C34
|
B:1II401
|
1.4
|
47.6
|
0.5
|
C32
|
B:1II401
|
2.3
|
43.2
|
0.5
|
C30
|
B:1II401
|
2.3
|
48.8
|
0.5
|
C28
|
B:1II401
|
3.6
|
43.4
|
0.5
|
C26
|
B:1II401
|
3.6
|
45.6
|
0.5
|
C21
|
B:1II401
|
4.1
|
45.1
|
0.5
|
CG
|
B:PRO132
|
4.2
|
54.3
|
1.0
|
CD2
|
A:LEU253
|
4.6
|
46.2
|
1.0
|
CD1
|
B:LEU128
|
4.6
|
56.5
|
1.0
|
CD
|
B:PRO132
|
4.8
|
47.6
|
1.0
|
O
|
B:LEU128
|
5.0
|
54.8
|
1.0
|
|
Reference:
N.K.Khanra,
C.Wang,
B.Delgado,
S.B.Long.
Structure of Human TWIK2 Bound to Pimozide To Be Published.
Page generated: Wed Jul 16 11:48:04 2025
|