Fluorine in PDB, part 118 (files: 4681-4720),
PDB 5rzc-5sb0
Experimental structures of coordination spheres of Fluorine (F) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Fluorine atoms. PDB files: 4681-4720 (PDB 5rzc-5sb0).
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5rzc (F: 1) - EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z300245038
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5rzd (F: 1) - EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z198194394
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5rzn (F: 6) - EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z1745658474
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5rzq (F: 1) - EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z100642432
Other atoms:
Br (1);
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5rzr (F: 1) - EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z53825177
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5rzs (F: 1) - EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z1703168683
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5s28 (F: 1) - Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Z409974522
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5s29 (F: 1) - Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Z199959602
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5s2b (F: 1) - Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Z373769142
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5s2v (F: 1) - Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Z1186029914
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5s30 (F: 1) - Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Z65532537
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5s38 (F: 3) - Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Z1745658474
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5s4m (F: 3) - Tubulin-Z2142244288-Complex
Other atoms:
Ca (4);
Mg (5);
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5s4u (F: 1) - Tubulin-Z30620520-Complex
Other atoms:
Mg (5);
Ca (4);
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5s4z (F: 2) - Tubulin-Z28290384-Complex
Other atoms:
Mg (5);
Ca (4);
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5s56 (F: 2) - Tubulin-Z2856434783-Complex
Other atoms:
Ca (4);
Mg (5);
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5s59 (F: 3) - Tubulin-Z1324080698-Complex
Other atoms:
Mg (5);
Ca (4);
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5s5e (F: 4) - Tubulin-Z1515654336-Complex
Other atoms:
Ca (4);
Mg (5);
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5s5h (F: 2) - Tubulin-Z2074076908-Complex
Other atoms:
Ca (4);
Mg (5);
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5s5p (F: 1) - Tubulin-Z53825177-Complex
Other atoms:
Ca (4);
Mg (5);
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5s5s (F: 1) - Tubulin-Z166605480-Complex
Other atoms:
Mg (5);
Ca (4);
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5s5t (F: 1) - Tubulin-Z198194394-Complex
Other atoms:
Ca (4);
Mg (5);
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5s5x (F: 1) - Tubulin-Z45705015-Complex
Other atoms:
Mg (5);
Ca (4);
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5s5z (F: 3) - Tubulin-Z2856434944-Complex
Other atoms:
Ca (4);
Mg (5);
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5s62 (F: 1) - Tubulin-Z100642432-Complex
Other atoms:
Ca (4);
Br (1);
Mg (5);
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5s8s (F: 1) - Pandda Analysis Group Deposition -- Crystal Structure of Phip in Complex with Z198194396 Synthetic Derivative
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5s8w (F: 2) - Pandda Analysis Group Deposition -- Crystal Structure of Phip in Complex with Z198194396 Synthetic Derivative
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5s91 (F: 3) - Pandda Analysis Group Deposition -- Crystal Structure of Phip in Complex with Z198194396 Synthetic Derivative
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5s97 (F: 3) - Pandda Analysis Group Deposition -- Crystal Structure of Phip in Complex with Z198194396 Synthetic Derivative
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5s9a (F: 3) - Pandda Analysis Group Deposition -- Crystal Structure of Phip in Complex with Z198194396 Synthetic Derivative
Other atoms:
Cl (1);
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5s9n (F: 3) - Autotaxin, [4-(Trifluoromethoxy)Phenyl]Methyl (3AS,6AS)-2-(1H- Benzotriazole-5-Carbonyl)-1,3,3A,4,6,6A-Hexahydropyrrolo[3,4- C]Pyrrole-5-Carboxylate, 1.80A, P212121, Rfree=23.3%
Other atoms:
Cl (4);
Zn (1);
Ca (2);
Na (1);
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5s9w (F: 2) - Pandda Analysis Group Deposition -- Crystal Structure of Trypanosoma Brucei Trypanothione Reductase in Complex with Z26769872
Other atoms:
Mg (2);
Br (1);
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5sa1 (F: 1) - Pandda Analysis Group Deposition -- Crystal Structure of Trypanosoma Brucei Trypanothione Reductase in Complex with Z2856434944
Other atoms:
Br (1);
Mg (2);
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5sa6 (F: 2) - Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 Nendou in Complex with Z2856434783
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5sau (F: 3) - DDR1, 3-[2-(6-Aminopyridin-3-Yl)Ethynyl]-N-[3-(Trifluoromethyl) Phenyl]Benzamide, 1.800A, P212121, Rfree=23.1%
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5sav (F: 3) - DDR1, N-[2-[3-(2-Aminopyrimidin-5-Yl)Oxyphenyl]Ethyl]-3- (Trifluoromethoxy)Benzamide, 1.760A, P212121, Rfree=23.5%
Other atoms:
I (3);
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5saw (F: 3) - DDR1, 2-[3-(2-Pyridin-3-Ylethynyl)Phenyl]-N-[3-(Trifluoromethyl) Phenyl]Acetamide, 1.601A, P212121, Rfree=22.6%
Other atoms:
I (10);
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5sax (F: 3) - DDR1, 2-[3-(2-Pyridin-3-Ylethynyl)Phenyl]-N-[3-(Trifluoromethyl) Phenyl]Acetamide, 1.902A, Second P212121 Form, Rfree=25.4%, Second Form
Other atoms:
I (8);
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5say (F: 6) - DDR1, N-[2-[3-(2-Aminopyrimidin-5-Yl)Oxyphenyl]Ethyl]-3- (Trifluoromethoxy)Benzamide, 2.190A, P1211, Rfree=27.7%
Other atoms:
I (15);
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5sb0 (F: 3) - DDR1, N-[[2-(2-Pyridin-3-Yloxyethyl)Cyclohexyl]Methyl]-3- (Trifluoromethoxy)Benzamide, 1.970A, P212121, Rfree=25.6%
Other atoms:
Cl (1);
I (1);
Page generated: Tue Jul 15 07:02:46 2025
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