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Fluorine in PDB, part 125 (files: 4961-5000), PDB 5ug9-5uv2

Experimental structures of coordination spheres of Fluorine (F) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Fluorine atoms. PDB files: 4961-5000 (PDB 5ug9-5uv2).
  1. 5ug9 (F: 1) - Crystal Structure of the Egfr Kinase Domain (L858R, T790M, V948R) in Complex with A Covalent Inhibitor N-[(3R,4R)-4-Fluoro-1-{6-[(3- Methoxy-1-Methyl-1H-Pyrazol-4-Yl)Amino]-9-(Propan-2-Yl)-9H-Purin-2- Yl}Pyrrolidin-3-Yl]Propanamide
  2. 5ugc (F: 1) - Crystal Structure of the Egfr Kinase Domain (L858R, T790M, V948R) in Complex with A Covalent Inhibitor N-[(3R,4R)-4-Fluoro-1-{6-[(3- Methoxy-1-Methyl-1H-Pyrazol-4-Yl)Amino]-9-Methyl-9H-Purin-2- Yl}Pyrrolidin-3-Yl]Propanamide
  3. 5uht (F: 6) - Structure of the Thermotoga Maritima HK853-BEF3-RR468 Complex at pH 5.0
    Other atoms: Mg (2);
  4. 5uie (F: 9) - VPS4-VTA1 Complex
    Other atoms: Mg (3);
  5. 5uiu (F: 2) - Crystal Structure of IRAK4 in Complex with Compound 30
  6. 5uj0 (F: 6) - Structure of T4PNKP 3' Phosphatase Covalently Bound to BEF3
    Other atoms: Mg (2);
  7. 5uj2 (F: 1) - Crystal Structure of Hcv NS5B Genotype 2A Jfh-1 Isolate with S15G E86Q E87Q C223H V321I Mutations and DELTA8 Neta Hairpoin Loop Deletion in Complex with Gs-639476 (Diphsohate Version of Gs-9813), MN2+ and Symmetrical Primer Template 5'-Auaaauuu
    Other atoms: Mn (3); Cl (1);
  8. 5ukd (F: 3) - pH Influences Fluoride Coordination Number of the Alfx Phosphoryl Transfer Transition State Analog
    Other atoms: Mg (1); Al (1);
  9. 5ukk (F: 1) - Human GRK2 in Complex with Human G-Beta-Gamma Subunits and CCG211998 (14AK)
    Other atoms: Mg (1);
  10. 5ukl (F: 1) - Human GRK2 in Complex with Gbetagamma Subunits and CCG222886 (14BD)
    Other atoms: Mg (1);
  11. 5ukm (F: 1) - Bovine GRK2 in Complex with Human Gbetagamma Subunits and CCG258208 (14AS)
    Other atoms: Mg (1);
  12. 5ul0 (F: 7) - S. Cerevisiae CYP51 Complexed with Vt-1161
    Other atoms: Fe (1);
  13. 5uln (F: 1) - Synthesis of Novel Seleno Ureido Containing Compounds As Slc-0111 Analogs. Investigations on Carbonic Anhydrases Activity, Glutathione Peroxidase and X-Ray Crystallography
    Other atoms: Zn (1); Na (2);
  14. 5ulp (F: 2) - Structure of the NS5 Methyltransferase From Zika Bound to MS2042
    Other atoms: Cl (4); Na (2);
  15. 5uop (F: 1) - Crystal Structure of the Prototype Foamy Virus Intasome with A 2- Pyridinone Aminal Inhibitor (Compound 18)
    Other atoms: Mg (3); Zn (1); Cl (1);
  16. 5uoq (F: 1) - Crystal Structure of the Prototype Foamy Virus Intasome with A 2- Pyridinone Aminal Inhibitor (Compound 31)
    Other atoms: Mg (3); Zn (1); Cl (1);
  17. 5uos (F: 2) - Crystal Structure of Cblc (Mmachc) (1-238), A Human B12 Processing Enzyme, Complexed with An Antivitamin B12
    Other atoms: Co (1); Na (1);
  18. 5uoz (F: 1) - Insulin with Proline Analog Fyp at Position B28 in the T2 State
  19. 5upf (F: 2) - Crystal Structure of Human Nampt with Isoindoline Urea Inhibitor Compound 53
  20. 5upg (F: 3) - Crystal Structure of Lpxc From Pseudomonas Aeruginosa in Complex with Pf-5081090
    Other atoms: Cl (1); Zn (2);
  21. 5uqa (F: 6) - Insulin with Proline Analog Fzp at Position B28 in the R6 State
    Other atoms: Zn (2); Cl (2); Na (6);
  22. 5uqh (F: 24) - Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase From Campylobacter Jejuni in the Complex with Inhibitor P182
    Other atoms: K (8); Cl (8);
  23. 5uqk (F: 1) - Clostridium Difficile Toxin A (Tcda) Glucosyltransferase Domain in Complex with U2F
    Other atoms: Mn (1);
  24. 5uql (F: 1) - Clostridium Difficile Toxin A (Tcda) Glucosyltransferase Domain in Complex with U2F
    Other atoms: Mn (1);
  25. 5uqm (F: 1) - Clostridium Difficile Toxin B (Tcdb) Glucosyltransferase Domain in Complex with U2F
    Other atoms: Mn (1);
  26. 5uqn (F: 1) - Clostridium Difficile Toxin B (Tcdb) Glucosyltransferase Domain in Complex with U2F
    Other atoms: Mn (1);
  27. 5urj (F: 1) - Crystal Structure of Human BRR2 in Complex with T-3905516
  28. 5usq (F: 1) - Alk-5 Kinase Inhibitor Complex
    Other atoms: Cl (1);
  29. 5usy (F: 4) - JAK2 JH1 in Complex with Jnj-7706621
  30. 5usz (F: 2) - JAK2 JH2 in Complex with Jnj-7706621
  31. 5ut1 (F: 2) - JAK2 JH2 in Complex with Bi-D1870
  32. 5ut4 (F: 2) - JAK2 JH2 in Complex with Nvp-BSK805
  33. 5utn (F: 3) - Kaposi'S Sarcoma Herpesvirus Protease in Complex with Allosteric Inhibitor
    Other atoms: Cl (2);
  34. 5uu1 (F: 2) - Crystal Structure of Human Vaccinia-Related Kinase 2 (Vrk-2) Bound to Bi-D1870
  35. 5uu3 (F: 22) - Insulin with Proline Analog Dfp at Position B28 in the R6 State
    Other atoms: Zn (4); Cl (4);
  36. 5uuh (F: 1) - Bacillus Cereus Dna Glycosylase Alkd Bound to A Yatakemycin-Adenine Nucleobase Adduct and Dna Containing A Fluorinated Abasic Site (9-Mer Product Complex)
    Other atoms: Ca (1);
  37. 5uuu (F: 6) - Design, Synthesis, and Evaluation of the First Selective and Potent G- Protein-Coupled Receptor Kinase 2 (GRK2) Inhibitor For the Potential Treatment of Heart Failure
  38. 5uuv (F: 12) - Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase From Bacillus Anthracis in the Complex with A Product Imp and the Inhibitor P182
    Other atoms: K (4); Cl (4);
  39. 5uv1 (F: 1) - Crystal Structure of (+)-Limonene Synthase Complexed with 2- Fluorogeranyl Diphosphate
    Other atoms: Mn (3);
  40. 5uv2 (F: 2) - Crystal Structure of (+)-Limonene Synthase Complexed with 2- Fluoroneryl Diphosphate
    Other atoms: Mn (3);
Page generated: Mon Aug 4 21:58:14 2025

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