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Fluorine in PDB 8dgt: Cryo-Em Structure of A Ras/Raf Complex (State 2)

Enzymatic activity of Cryo-Em Structure of A Ras/Raf Complex (State 2)

All present enzymatic activity of Cryo-Em Structure of A Ras/Raf Complex (State 2):
2.7.11.1; 2.7.12.2;

Other elements in 8dgt:

The structure of Cryo-Em Structure of A Ras/Raf Complex (State 2) also contains other interesting chemical elements:

Zinc (Zn) 2 atoms
Iodine (I) 1 atom
Magnesium (Mg) 2 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Cryo-Em Structure of A Ras/Raf Complex (State 2) (pdb code 8dgt). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Cryo-Em Structure of A Ras/Raf Complex (State 2), PDB code: 8dgt:

Fluorine binding site 1 out of 1 in 8dgt

Go back to Fluorine Binding Sites List in 8dgt
Fluorine binding site 1 out of 1 in the Cryo-Em Structure of A Ras/Raf Complex (State 2)


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Cryo-Em Structure of A Ras/Raf Complex (State 2) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F403

b:51.3
occ:1.00
F02 B:LCJ403 0.0 51.3 1.0
C19 B:LCJ403 1.4 42.5 1.0
C17 B:LCJ403 2.4 41.9 1.0
C21 B:LCJ403 2.4 40.6 1.0
N07 B:LCJ403 2.8 45.3 1.0
O04 B:LCJ403 3.1 49.8 1.0
CD B:LYS97 3.1 77.7 1.0
CD1 B:ILE141 3.2 68.3 1.0
OD1 B:ASP208 3.3 86.4 1.0
CE B:LYS97 3.3 82.7 1.0
C20 B:LCJ403 3.6 38.7 1.0
C23 B:LCJ403 3.6 47.7 1.0
NZ B:LYS97 3.9 87.8 1.0
C10 B:LCJ403 4.1 41.6 1.0
C22 B:LCJ403 4.1 39.8 1.0
CG2 B:ILE141 4.1 69.8 1.0
C18 B:LCJ403 4.1 44.9 1.0
CB B:ILE141 4.3 67.9 1.0
CG1 B:ILE141 4.3 64.8 1.0
CG B:LYS97 4.3 69.0 1.0
CG B:ASP208 4.5 84.7 1.0
CD1 B:ILE99 4.5 79.7 1.0
CB B:LYS97 4.6 62.5 1.0
C12 B:LCJ403 4.6 46.7 1.0
CA B:ASP208 4.9 80.0 1.0

Reference:

M.J.Eck, H.Jeon, E.Park, S.Rawson. Cryo-Em Structure of A Ras/Raf Complex To Be Published.
Page generated: Wed Jul 16 03:25:06 2025

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