Fluorine in PDB, part 227 (files: 9041-9080),
PDB 8cqe-8dfd
Experimental structures of coordination spheres of Fluorine (F) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Fluorine atoms. PDB files: 9041-9080 (PDB 8cqe-8dfd).
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8cqe (F: 8) - Pvhl:Elob:Eloc in Complex with (2S,4R)-1-((S)-2-(1-Fluorocyclopropane- 1-Carboxamido)-3,3-Dimethylbutanoyl)-4-Hydroxy-N-((S)-1-(2-Methyl-4- (4-Methylthiazol-5-Yl)Phenyl)Ethyl)Pyrrolidine-2-Carboxamide (Compound 37)
Other atoms:
As (12);
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8cqk (F: 4) - Pvhl:Elob:Eloc in Complex with (2S,4R)-1-((S)-2-(1-Fluorocyclopropane- 1-Carboxamido)-3,3-Dimethylbutanoyl)-4-Hydroxy-N-((S)-1-(2-Methyl-4- (4-Methylthiazol-5-Yl)Phenyl)Ethyl)Pyrrolidine-2-Carboxamide (Compound 30)
Other atoms:
As (12);
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8cql (F: 8) - Pvhl:Elob:Eloc in Complex with (2S,4R)-N-((S)-1-(5-Fluoro-2-Methoxy-4- (4-Methylthiazol-5-Yl)Phenyl)Ethyl)-1-((S)-2-(1-Fluorocyclopropane-1- Carboxamido)-3,3-Dimethylbutanoyl)-4-Hydroxypyrrolidine-2-Carboxamide (Compound 33)
Other atoms:
As (12);
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8cr0 (F: 1) - Crystal Structure of Human Carbonic Anhydrase II in Complex with A Triazolyl Benzoxaborole Inhibitor
Other atoms:
Zn (1);
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8cu7 (F: 3) - Crystal Structure of A2AAR-STAR2-Bril in Complex with A Novel A2A Antagonist, Lj-4517
Other atoms:
Na (1);
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8cx5 (F: 2) - Crystal Structure of Small Molecule Alpha,Beta-Ketoamide 4 Covalently Bound to K-Ras(G12R)
Other atoms:
Cl (2);
Mg (2);
Na (1);
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8cza (F: 6) - Crystal Structure of the First Bromodomain (BD1) of Human Brdt Bound to Gxh-IV-075
Other atoms:
Na (2);
Cl (3);
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8czv (F: 4) - Structure of Mers 3CL Protease in Complex with the Cyclopropane Based Inhibitor 17D
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8czx (F: 4) - Structure of Sars-Cov-2 3CL Protease in Complex with the Cyclopropane Based Inhibitor 17D
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8d0c (F: 6) - Human SARM1 Tir Domain Bound to Nb-3-Adpr
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8d0f (F: 6) - Human SARM1 Tir Domain Bound to Nb-2-Adpr
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8d0g (F: 6) - Human SARM1 Tir Domain Bound to Nb-3-Adprp
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8d0h (F: 6) - Human SARM1 Tir Domain Bound to Nb-3-Gdpr
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8d0i (F: 6) - Human SARM1 Bound to An Nb-3 Eadpr Adduct
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8d0q (F: 3) - Human FUT9 Bound to Gdp-CF3-Fucose and H-Type 2
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8d1c (F: 3) - Crystal Structure of T252E-CYP199A4 in Complex with 4- (Trifluoromethoxy)Benzoic Acid
Other atoms:
Fe (1);
Cl (1);
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8d3e (F: 1) - Crystal Structure of Human Apoptosis-Inducing Factor (Aif) W196A Mutant Complexed with 6-Fluoroquinolin-4-Amine
Other atoms:
Cl (1);
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8d3j (F: 2) - Crystal Structure of Human Apoptosis-Inducing Factor (Aif) Complexed with 6-Fluoro-2-Methylquinolin-4-Amine
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8d3k (F: 2) - Crystal Structure of Human Apoptosis-Inducing Factor (Aif) Complexed with 8-Fluoro-2-Methylquinolin-4-Amine
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8d3u (F: 4) - Human ALPHA3 Na+/K+-Atpase in Its Na+-Occluded State
Other atoms:
Al (1);
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8d3x (F: 4) - Human ALPHA3 Na+/K+-Atpase in Its K+-Occluded State
Other atoms:
Mg (1);
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8d3y (F: 3) - Human ALPHA3 Na+/K+-Atpase in Its Exoplasmic Side-Open State
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8d4p (F: 6) - Crystal Structure of the Sars-Cov-2 (Covid-19) Main Protease in Complex with Inhibitor JUN10-90-3-C1
Other atoms:
Cl (1);
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8d73 (F: 2) - Crystal Structure of Egfr Lrtm with Compound 7
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8d76 (F: 2) - Crystal Structure of Egfr Lrtm with Compound 24
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8d7u (F: 1) - Cereblon~DDB1 Bound to Cc-92480 with DDB1 in the Linear Conformation
Other atoms:
Zn (1);
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8d7v (F: 1) - Cereblon~DDB1 Bound to Cc-92480 with DDB1 in the Twisted Conformation
Other atoms:
Zn (1);
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8d7w (F: 1) - Cereblon~DDB1 Bound to Cc-92480 with DDB1 in the Hinged Conformation
Other atoms:
Zn (1);
-
8d7z (F: 1) - Cereblon-DDB1 Bound to Cc-92480 and Ikaros ZF1-2-3
Other atoms:
Zn (2);
-
8d98 (F: 4) - Crystal Structure of Danio Rerio Histone Deacetylase 6 Catalytic Domain 2 Complexed with Fluorinated Inhibitor 5
Other atoms:
Zn (2);
K (4);
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8d99 (F: 3) - Crystal Structure of Danio Rerio Histone Deacetylase 6 Catalytic Domain 2 Complexed with Fluorinated Inhibitor 7
Other atoms:
K (4);
Zn (2);
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8d9a (F: 6) - Crystal Structure of Danio Rerio Histone Deacetylase 6 Catalytic Domain 2 Complexed with Fluorinated Inhibitor 8
Other atoms:
Zn (2);
K (4);
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8d9b (F: 8) - Crystal Structure of Danio Rerio Histone Deacetylase 6 Catalytic Domain 2 Complexed with Fluorinated Inhibitor 9
Other atoms:
Zn (2);
K (4);
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8d9c (F: 10) - Crystal Structure of Danio Rerio Histone Deacetylase 6 Catalytic Domain 2 Complexed with Fluorinated Inhibitor 10
Other atoms:
K (4);
Zn (2);
-
8db7 (F: 3) - Adenosine/Guanosine Nucleoside Hydrolase Bound to A Fragment Inhibitor
Other atoms:
Ca (4);
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8dcz (F: 6) - Crystal Structure of Sars-Cov-2 Main Protease (Mpro) M165Y Mutant in Complex with Nirmatrelvir
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8ddf (F: 12) - Quasi-Racemic Mixture of L-Fwf and D-Fyf Peptide Reveals Rippled Beta- Sheet
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8deg (F: 2) - Crystal Structure of Dlk in Complex with Inhibitor DN0011197
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8dfc (F: 8) - Cryoem Structure of the 1:1 Adp-Tetrafluoroaluminate Stabilized Nitrogenase Complex From Azotobacter Vinelandii
Other atoms:
Mo (2);
Al (2);
Mg (2);
Fe (36);
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8dfd (F: 16) - Cryoem Structure of the 2:1 Adp-Tetrafluoroaluminate Stabilized Nitrogenase Complex From Azotobacter Vinelandii
Other atoms:
Mg (4);
Fe (40);
Mo (2);
Al (4);
Page generated: Mon Dec 15 10:15:48 2025
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