Atomistry » Fluorine » PDB 9d04-9ggq » 9f4x
Atomistry »
  Fluorine »
    PDB 9d04-9ggq »
      9f4x »

Fluorine in PDB 9f4x: UP1 in Complex with Z1220452176

Protein crystallography data

The structure of UP1 in Complex with Z1220452176, PDB code: 9f4x was solved by L.Dunnett, F.Prischi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.97 / 1.60
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 38.063, 43.855, 55.951, 90, 93.9, 90
R / Rfree (%) 17.9 / 20.8

Fluorine Binding Sites:

The binding sites of Fluorine atom in the UP1 in Complex with Z1220452176 (pdb code 9f4x). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the UP1 in Complex with Z1220452176, PDB code: 9f4x:

Fluorine binding site 1 out of 1 in 9f4x

Go back to Fluorine Binding Sites List in 9f4x
Fluorine binding site 1 out of 1 in the UP1 in Complex with Z1220452176


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of UP1 in Complex with Z1220452176 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F201

b:17.4
occ:0.61
F1 A:HWH201 0.0 17.4 0.6
C10 A:HWH201 1.4 12.3 0.6
C9 A:HWH201 2.3 15.0 0.6
C11 A:HWH201 2.4 10.8 0.6
CD1 A:PHE59 3.2 13.3 1.0
CG A:MET46 3.2 11.2 1.0
C A:GLY58 3.2 7.2 1.0
CA A:GLY58 3.4 7.3 1.0
N A:PHE59 3.5 8.8 1.0
O A:GLY58 3.6 9.2 1.0
C8 A:HWH201 3.6 16.1 0.6
C12 A:HWH201 3.6 13.7 0.6
SD A:MET46 3.9 13.9 1.0
CD2 A:PHE57 3.9 10.7 1.0
CE2 A:PHE57 3.9 10.4 1.0
CB A:PHE59 3.9 11.3 1.0
CG A:PHE59 4.0 12.4 1.0
C7 A:HWH201 4.1 14.9 0.6
N A:GLY58 4.1 7.3 1.0
CE1 A:PHE59 4.1 13.1 1.0
CA A:PHE59 4.3 8.0 1.0
CB A:MET46 4.6 8.6 1.0
O A:VAL44 4.7 8.7 1.0
C A:PHE57 4.7 7.9 1.0
CD1 A:PHE17 4.7 19.2 1.0
O A:PHE57 4.8 7.2 1.0
CE A:MET46 4.8 18.8 1.0
C5 A:HWH201 4.9 21.7 0.6

Reference:

L.Dunnett, F.Prischi. Enhanced Identification of Small Molecules Binding to Hnrnp A1 Via in Silico Hotspot and Cryptic Pockets Mapping Coupled with X-Ray Fragment Screening To Be Published.
Page generated: Wed Jul 16 11:38:22 2025

Last articles

Zn in 9QM9
Zn in 9S44
Zn in 9OFE
Zn in 9OFC
Zn in 9OFD
Zn in 9OF1
Zn in 9OFB
Zn in 9N0J
Zn in 9M5X
Zn in 9LGI
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy