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Fluorine in PDB, part 257 (files: 10241-10280), PDB 9d04-9ggq

Experimental structures of coordination spheres of Fluorine (F) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Fluorine atoms. PDB files: 10241-10280 (PDB 9d04-9ggq).
  1. 9d04 (F: 6) - Co-Crystal Structure of Circularly Permuted Human Taspase-1 Bound to Ligand SMDC994967 1-(Ethenesulfonyl)-4-{[4- (Trifluoromethoxy) Phenyl]Methyl}Piperazine
    Other atoms: Na (2); Cl (3);
  2. 9d6c (F: 180) - Gag Ca-SP1 Immature Lattice Bound with Lenacapavir and Bevirimat From Enveloped Virus Like Particles
    Other atoms: Cl (18);
  3. 9d6d (F: 180) - Gag Ca-SP1 Immature Lattice Bound with Lenacapavir From Enveloped Virus Like Particles
    Other atoms: Cl (18);
  4. 9d9t (F: 1) - Human Norovirus Gii.4 Sydney Protease R112A Mutant in Complex with Rupintrivir
    Other atoms: I (5);
  5. 9d9y (F: 2) - Human Norovirus Gi.1 Norwalk Protease in Complex with Rupintrivir
  6. 9da0 (F: 1) - Human Norovirus Gii.4 Houston R112A Mutant Protease in Complex with Rupintrivir
  7. 9da7 (F: 1) - Human Norovirus Gii.4 Houston Protease in Complex with Rupintrivir
  8. 9daj (F: 1) - Human Norovirus Gii.4 Sydney Protease in Complex with Rupintrivir
    Other atoms: I (8);
  9. 9dal (F: 1) - Human Norovirus Gii.3 R112A Mutant Protease in Complex with Rupintrivir
  10. 9dap (F: 1) - Human Norovirus Gii.3 Protease in Complex with Rupintrivir
  11. 9dgi (F: 3) - Cannabinoid Receptor 1-Gi Complex with Novel Ligand
  12. 9dl7 (F: 4) - Structure of Proline Utilization A Complexed with 1-(4-Fluorophenyl) Thiourea
  13. 9dwd (F: 180) - Gag Ca-SP1 Immature Lattice Bound with Lenacapavir From Enveloped Virus Like Particles (T8I)
    Other atoms: Cl (18);
  14. 9dxs (F: 4) - Ligand-Binding and Transmembrane Domains of Kainate Receptor GLUK2 in Complex with Positive Allosteric Modulator Bpam-344 and Channel Blocker Spermine
  15. 9dyx (F: 5) - Racemic Mixture of Peptide Vvggvv Forms Rippled Sheets
  16. 9dyy (F: 24) - Peptide of Mixed Chirality, Vvgg(Dva)(Dva), Assembles Into A Rippled Beta Sheet
  17. 9ear (F: 3) - CHD1-Nucleosome Complex (Closed State)
  18. 9eco (F: 20) - E. Coli Dnab Bound to Three Dnag C-Terminal Domains, Ssdna, Adp and ALF4
    Other atoms: Mg (5); Al (5);
  19. 9ed3 (F: 18) - Yeast RAD51 in Complex with Ssdna and Adp-Aluminium Fluoride
    Other atoms: Al (6); Mg (6);
  20. 9eev (F: 3) - Crystal Structure of the Sars-Cov-2 Omicron NSP5 Main Protease (Mpro) E166V Mutant in Complex with Inhibitor Nirmatrelvir (Pf-07321332)
  21. 9ego (F: 3) - Cannabinoid Receptor 1-Gi Complex with Novel Ligand
  22. 9ery (F: 2) - Co-Crystal Strucutre of Pd-L1 with Low Molecular Weight Inhibitor
  23. 9es4 (F: 42) - Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Football Complex
    Other atoms: K (14); Mg (14);
  24. 9es5 (F: 21) - Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex
    Other atoms: Mg (7); K (7);
  25. 9es6 (F: 42) - Adp:BEF3-Bound Human Mitochondrial HSP60 Double-Ring Complex
    Other atoms: K (14); Mg (14);
  26. 9euq (F: 3) - Cryoem Structure of LMCA1 in E2P State
    Other atoms: Mg (1);
  27. 9ew4 (F: 1) - Ternary Structure of 14-3-3S, C-Raf Phosphopeptide 12MER (PS259) and Compound 86 (1124384)
    Other atoms: Mg (4); Cl (1); Br (1);
  28. 9f1u (F: 4) - Cryo-Em Structure of the I923V MDA5-Dsrna Filament with Adp-ALF4 Bound and 81-Degree Helical Twist
    Other atoms: Al (1); Zn (1);
  29. 9f20 (F: 4) - Cryo-Em Structure of the I923V MDA5-Dsrna Filament with Adp-ALF4 Bound and 88-Degree Helical Twist
    Other atoms: Zn (1); Al (1);
  30. 9f2h (F: 3) - Crystal Structure of Sars-Cov-2 N-Protein C-Terminal Domain in Complex with Riluzole
  31. 9f2l (F: 4) - Cryo-Em Structure of the I923V MDA5-Dsrna Filament with Adp-ALF4 Bound and 73-Degree Helical Twist
    Other atoms: Zn (1); Al (1);
  32. 9f4d (F: 1) - UP1 in Complex with Z1203107138
  33. 9f4g (F: 1) - UP1 in Complex with Z1373445602
  34. 9f4p (F: 1) - UP1 in Complex with Z1217960891
  35. 9f4v (F: 2) - UP1 in Complex with EN300-118084
  36. 9f4x (F: 1) - UP1 in Complex with Z1220452176
  37. 9fxi (F: 3) - Crystal Structure of Cobalt(II)-Substituted Double Mutant Y115E Y117E Human Glutaminyl Cyclase in Complex with SEN177
    Other atoms: Co (3);
  38. 9gd3 (F: 3) - Structure of A Mononucleosome Bound By One Copy of CHD1 with the Dbd on the Exit-Side Dna.
    Other atoms: Mg (1);
  39. 9gef (F: 6) - Experimental Localization of Metal-Binding Sites Reveals the Role of Metal Ions in the Delafloxacin-Stabilized Streptococcus Pneumoniae Topoisomerase IV Dna Cleavage Complex
    Other atoms: Cl (4); Mg (4); K (8);
  40. 9ggq (F: 2) - E.Coli Gyrase Holocomplex with Cleaved Chirally Wrapped 217 Bp Dna Fragment and Moxifloxacin
    Other atoms: Mg (4);
Page generated: Tue Aug 26 20:25:08 2025

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