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Fluorine in PDB 2ph6: Crystal Structure of Human Beta Secretase Complexed with Inhibitor

Enzymatic activity of Crystal Structure of Human Beta Secretase Complexed with Inhibitor

All present enzymatic activity of Crystal Structure of Human Beta Secretase Complexed with Inhibitor:
3.4.23.46;

Protein crystallography data

The structure of Crystal Structure of Human Beta Secretase Complexed with Inhibitor, PDB code: 2ph6 was solved by S.Munshi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.00
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 103.795, 127.130, 76.205, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 21.8

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Human Beta Secretase Complexed with Inhibitor (pdb code 2ph6). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of Human Beta Secretase Complexed with Inhibitor, PDB code: 2ph6:

Fluorine binding site 1 out of 1 in 2ph6

Go back to Fluorine Binding Sites List in 2ph6
Fluorine binding site 1 out of 1 in the Crystal Structure of Human Beta Secretase Complexed with Inhibitor


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Human Beta Secretase Complexed with Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F401

b:25.9
occ:1.00
F A:712401 0.0 25.9 1.0
C28 A:712401 1.3 23.9 1.0
C29 A:712401 2.4 23.7 1.0
C30 A:712401 2.4 22.6 1.0
CB A:ALA335 3.0 24.1 1.0
CE1 A:TYR14 3.4 25.4 1.0
O A:HOH508 3.4 39.1 1.0
O A:HOH430 3.4 23.7 1.0
NH1 A:ARG307 3.6 32.1 1.0
C31 A:712401 3.6 23.3 1.0
C27 A:712401 3.6 22.9 1.0
CD1 A:TYR14 3.8 24.7 1.0
OE1 A:GLU339 3.9 28.3 1.0
C26 A:712401 4.1 24.5 1.0
CZ A:ARG307 4.1 33.1 1.0
NH2 A:ARG307 4.1 29.9 1.0
CZ A:TYR14 4.5 26.5 1.0
CA A:ALA335 4.5 24.9 1.0
N A:GLY13 4.6 30.6 1.0
CA A:GLY13 4.7 29.0 1.0
O A:GLY11 4.7 39.1 1.0
CA A:THR232 4.7 22.3 1.0
CG2 A:THR232 4.8 22.1 1.0
OH A:TYR14 4.8 28.4 1.0
O A:SER229 5.0 21.0 1.0
CD A:GLU339 5.0 28.1 1.0

Reference:

S.R.Lindsley, K.P.Moore, H.A.Rajapakse, H.G.Selnick, M.B.Young, H.Zhu, S.Munshi, L.Kuo, G.B.Mcgaughey, D.Colussi, M.C.Crouthamel, M.T.Lai, B.Pietrak, E.A.Price, S.Sankaranarayanan, A.J.Simon, G.R.Seabrook, D.J.Hazuda, N.T.Pudvah, J.H.Hochman, S.L.Graham, J.P.Vacca, P.G.Nantermet. Design, Synthesis, and Sar of Macrocyclic Tertiary Carbinamine Bace-1 Inhibitors. Bioorg.Med.Chem.Lett. V. 17 4057 2007.
ISSN: ISSN 0960-894X
PubMed: 17482814
DOI: 10.1016/J.BMCL.2007.04.072
Page generated: Wed Oct 28 14:47:18 2020

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