Fluorine in PDB 4u1y: Full Length GLUA2-Fw-(R,R)-2B Complex

The structure of Full Length GLUA2-Fw-(R,R)-2B Complex, PDB code: 4u1y was solved by L.Chen, E.Gouaux, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.97 / 3.90
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	105.250, 151.440, 330.490, 90.00, 90.00, 90.00
R / Rfree (%)	26.8 / 30.4

The binding sites of Fluorine atom in the Full Length GLUA2-Fw-(R,R)-2B Complex (pdb code 4u1y). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 4 binding sites of Fluorine where determined in the Full Length GLUA2-Fw-(R,R)-2B Complex, PDB code: 4u1y:
Jump to Fluorine binding site number: 1; 2; 3; 4;

Fluorine binding site 1 out of 4 in the Full Length GLUA2-Fw-(R,R)-2B Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Full Length GLUA2-Fw-(R,R)-2B Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:F2002 b:0.9 occ:1.00 F5 A:FWD2002 0.0 0.9 1.0 C5 A:FWD2002 1.3 0.1 1.0 C6 A:FWD2002 2.4 0.6 1.0 C4 A:FWD2002 2.5 0.2 1.0 O4 A:FWD2002 2.8 0.5 1.0 OG1 A:THR686 3.0 0.6 1.0 OE1 A:GLU705 3.1 0.9 1.0 N1 A:FWD2002 3.6 0.8 1.0 N3 A:FWD2002 3.7 0.3 1.0 CE A:MET708 3.7 0.4 1.0 CG A:MET708 4.1 0.3 1.0 C2 A:FWD2002 4.1 0.5 1.0 CD A:GLU705 4.1 0.6 1.0 OH A:TYR450 4.1 0.1 1.0 SD A:MET708 4.3 1.0 1.0 OE1 A:GLU402 4.3 0.3 1.0 CB A:THR686 4.3 0.2 1.0 CD A:GLU402 4.4 0.8 1.0 OE2 A:GLU705 4.5 0.1 1.0 CD2 A:LEU650 4.6 0.3 1.0 OE2 A:GLU402 4.6 0.2 1.0 C7 A:FWD2002 4.8 1.0 1.0 CG A:GLU402 4.8 0.8 1.0 CZ A:TYR450 4.9 0.5 1.0 CB A:MET708 4.9 0.4 1.0 CG2 A:THR686 5.0 0.6 1.0

Fluorine binding site 2 out of 4 in the Full Length GLUA2-Fw-(R,R)-2B Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Full Length GLUA2-Fw-(R,R)-2B Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:F2002 b:0.2 occ:1.00 F5 B:FWD2002 0.0 0.2 1.0 C5 B:FWD2002 1.3 0.8 1.0 C6 B:FWD2002 2.4 99.1 1.0 C4 B:FWD2002 2.4 0.4 1.0 OG1 B:THR686 2.8 0.1 1.0 O4 B:FWD2002 2.8 87.2 1.0 OE1 B:GLU705 3.4 0.3 1.0 N1 B:FWD2002 3.6 0.5 1.0 N3 B:FWD2002 3.7 0.4 1.0 CE B:MET708 4.1 0.8 1.0 C2 B:FWD2002 4.1 1.0 1.0 OE1 B:GLU402 4.1 0.7 1.0 CB B:THR686 4.1 0.3 1.0 CD B:GLU402 4.2 0.3 1.0 CG B:MET708 4.3 0.5 1.0 OH B:TYR450 4.3 0.8 1.0 CD2 B:LEU650 4.3 0.1 1.0 CD B:GLU705 4.4 0.6 1.0 OE2 B:GLU402 4.4 74.0 1.0 SD B:MET708 4.6 0.7 1.0 OE2 B:GLU705 4.7 0.8 1.0 CG B:GLU402 4.8 92.4 1.0 C7 B:FWD2002 4.8 87.3 1.0 CG2 B:THR686 4.9 0.7 1.0 CZ B:TYR450 5.0 0.0 1.0

Fluorine binding site 3 out of 4 in the Full Length GLUA2-Fw-(R,R)-2B Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Full Length GLUA2-Fw-(R,R)-2B Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:F1001 b:0.5 occ:1.00 F5 C:FWD1001 0.0 0.5 1.0 C5 C:FWD1001 1.3 0.9 1.0 C6 C:FWD1001 2.4 0.6 1.0 C4 C:FWD1001 2.5 0.6 1.0 O4 C:FWD1001 2.8 0.1 1.0 OG1 C:THR686 3.1 0.7 1.0 N1 C:FWD1001 3.6 0.1 1.0 CE C:MET708 3.6 0.8 1.0 N3 C:FWD1001 3.7 0.1 1.0 CG C:MET708 4.0 0.8 1.0 OE1 C:GLU705 4.1 0.4 1.0 C2 C:FWD1001 4.1 1.0 1.0 OH C:TYR450 4.1 0.9 1.0 SD C:MET708 4.2 0.8 1.0 OE1 C:GLU402 4.4 0.4 1.0 CB C:THR686 4.5 0.5 1.0 CD C:GLU402 4.5 1.0 1.0 CB C:MET708 4.8 0.1 1.0 C7 C:FWD1001 4.8 0.4 1.0 OE2 C:GLU402 4.8 0.8 1.0 CD2 C:LEU650 4.9 0.0 1.0 CD C:GLU705 4.9 0.8 1.0 CG C:GLU402 4.9 0.6 1.0 CZ C:TYR450 4.9 0.7 1.0

Fluorine binding site 4 out of 4 in the Full Length GLUA2-Fw-(R,R)-2B Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Full Length GLUA2-Fw-(R,R)-2B Complex within 5.0Å range: probe atom residue distance (Å) B Occ D:F2002 b:0.6 occ:1.00 F5 D:FWD2002 0.0 0.6 1.0 C5 D:FWD2002 1.4 0.5 1.0 C6 D:FWD2002 2.4 0.6 1.0 C4 D:FWD2002 2.5 0.9 1.0 O4 D:FWD2002 2.9 0.5 1.0 OG1 D:THR686 3.3 0.1 1.0 CE D:MET708 3.4 0.8 1.0 N1 D:FWD2002 3.6 0.5 1.0 CG D:MET708 3.7 0.3 1.0 OE1 D:GLU705 3.7 0.3 1.0 SD D:MET708 3.7 0.8 1.0 N3 D:FWD2002 3.7 1.0 1.0 C2 D:FWD2002 4.2 0.1 1.0 CB D:MET708 4.4 0.8 1.0 CD D:GLU705 4.5 0.1 1.0 CB D:THR686 4.6 0.6 1.0 OE1 D:GLU402 4.7 0.5 1.0 OH D:TYR450 4.7 0.7 1.0 N D:GLU705 4.8 0.6 1.0 CB D:GLU705 4.8 0.7 1.0 C7 D:FWD2002 4.8 0.7 1.0 CG D:GLU705 4.9 0.5 1.0 CD D:GLU402 4.9 0.3 1.0

K.L.Durr, L.Chen, R.A.Stein, R.De Zorzi, I.M.Folea, T.Walz, H.S.Mchaourab, E.Gouaux. Structure and Dynamics of Ampa Receptor GLUA2 in Resting, Pre-Open, and Desensitized States. Cell V. 158 778 2014.
ISSN: ISSN 1097-4172
PubMed: 25109876
DOI: 10.1016/J.CELL.2014.07.023