Fluorine in PDB 6g2y: Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation

All present enzymatic activity of Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation:
3.6.4.6;

The structure of Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation, PDB code: 6g2y was solved by L.Stach, R.M.L.Morgan, P.S.Freemont, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	51.50 / 2.15
Space group	P 61
Cell size a, b, c (Å), α, β, γ (°)	94.502, 94.502, 66.266, 90.00, 90.00, 120.00
R / Rfree (%)	22 / 24.8

The structure of Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation also contains other interesting chemical elements:

Sodium

(Na)

1 atom

The binding sites of Fluorine atom in the Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation (pdb code 6g2y). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation, PDB code: 6g2y:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in the Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation within 5.0Å range: probe atom residue distance (Å) B Occ A:F809 b:80.9 occ:1.00 F16 A:ELQ809 0.0 80.9 1.0 C14 A:ELQ809 1.4 73.4 1.0 C13 A:ELQ809 2.4 66.9 1.0 C15 A:ELQ809 2.4 75.5 1.0 F17 A:ELQ809 2.7 66.2 0.5 OD1 A:ASP627 3.1 76.9 1.0 CG A:ASP627 3.3 76.8 1.0 CB A:ASP627 3.5 71.1 1.0 C12 A:ELQ809 3.6 63.3 1.0 C10 A:ELQ809 3.6 74.8 1.0 CD A:PRO626 3.8 69.1 1.0 N A:ASP627 3.8 73.5 1.0 CG A:PRO626 3.9 63.4 1.0 OD2 A:ASP627 4.1 77.7 1.0 C11 A:ELQ809 4.1 69.7 1.0 CA A:ASP627 4.3 75.6 1.0 N A:PRO626 4.5 66.3 1.0 CD2 A:PHE758 4.7 62.7 1.0 CB A:LYS754 4.8 67.7 1.0 C A:PRO626 4.8 73.0 1.0 NE A:ARG625 4.8 78.3 1.0 O A:LYS754 4.9 58.0 1.0 C08 A:ELQ809 4.9 78.7 0.2 C A:ARG625 4.9 64.6 1.0

Fluorine binding site 2 out of 2 in the Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation within 5.0Å range: probe atom residue distance (Å) B Occ A:F809 b:66.2 occ:0.47 F17 A:ELQ809 0.0 66.2 0.5 C13 A:ELQ809 1.4 66.9 1.0 C14 A:ELQ809 2.4 73.4 1.0 C12 A:ELQ809 2.4 63.3 1.0 F16 A:ELQ809 2.7 80.9 1.0 CD1 A:TYR755 3.0 54.3 1.0 N A:TYR755 3.2 61.8 1.0 CA A:TYR755 3.2 61.4 1.0 C A:LYS754 3.3 57.8 1.0 O A:LYS754 3.4 58.0 1.0 CG A:TYR755 3.5 60.9 1.0 CE1 A:TYR755 3.5 55.8 1.0 C15 A:ELQ809 3.7 75.5 1.0 C11 A:ELQ809 3.7 69.7 1.0 CB A:LYS754 3.8 67.7 1.0 CG A:PRO626 3.9 63.4 1.0 CB A:TYR755 3.9 57.9 1.0 CD A:PRO626 4.0 69.1 1.0 C10 A:ELQ809 4.2 74.8 1.0 CA A:LYS754 4.2 62.0 1.0 CD2 A:TYR755 4.3 61.6 1.0 CZ A:TYR755 4.3 56.7 1.0 C A:TYR755 4.5 61.9 1.0 CB A:PHE758 4.5 63.5 1.0 CE2 A:TYR755 4.6 60.6 1.0 O A:ASP751 4.6 59.9 1.0 O A:TYR755 4.8 56.4 1.0

L.Stach, R.M.L.Morgan, L.Makhlouf, A.Douangamath, F.Von Delft, P.S.Freemont. Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation To Be Published.