Fluorine in PDB 7fz2: Crystal Structure of Human FABP4 in Complex with [3-Oxo-5-[4- (Trifluoromethyl)Phenyl]Cyclohexen-1-Yl] Acetate
Protein crystallography data
The structure of Crystal Structure of Human FABP4 in Complex with [3-Oxo-5-[4- (Trifluoromethyl)Phenyl]Cyclohexen-1-Yl] Acetate, PDB code: 7fz2
was solved by
A.Ehler,
J.Benz,
U.Obst,
Y.Kumagai,
M.G.Rudolph,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
37.58 /
1.12
|
|
Space group
|
P 21 21 21
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
32.505,
53.878,
75.181,
90,
90,
90
|
|
R / Rfree (%)
|
13.1 /
15.5
|
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Crystal Structure of Human FABP4 in Complex with [3-Oxo-5-[4- (Trifluoromethyl)Phenyl]Cyclohexen-1-Yl] Acetate
(pdb code 7fz2). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 6 binding sites of Fluorine where determined in the
Crystal Structure of Human FABP4 in Complex with [3-Oxo-5-[4- (Trifluoromethyl)Phenyl]Cyclohexen-1-Yl] Acetate, PDB code: 7fz2:
Jump to Fluorine binding site number:
1;
2;
3;
4;
5;
6;
Fluorine binding site 1 out
of 6 in 7fz2
Go back to
Fluorine Binding Sites List in 7fz2
Fluorine binding site 1 out
of 6 in the Crystal Structure of Human FABP4 in Complex with [3-Oxo-5-[4- (Trifluoromethyl)Phenyl]Cyclohexen-1-Yl] Acetate
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Crystal Structure of Human FABP4 in Complex with [3-Oxo-5-[4- (Trifluoromethyl)Phenyl]Cyclohexen-1-Yl] Acetate within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F201
b:20.1
occ:0.50
|
F19
|
A:WDI201
|
0.0
|
20.1
|
0.5
|
|
F19
|
A:WDI201
|
1.3
|
31.3
|
0.5
|
|
C16
|
A:WDI201
|
1.3
|
25.0
|
0.5
|
|
F21
|
A:WDI201
|
1.5
|
25.6
|
0.5
|
|
C16
|
A:WDI201
|
1.5
|
23.9
|
0.5
|
|
H29
|
A:WDI201
|
2.2
|
16.8
|
0.5
|
|
F21
|
A:WDI201
|
2.2
|
37.3
|
0.5
|
|
F20
|
A:WDI201
|
2.2
|
31.8
|
0.5
|
|
C14
|
A:WDI201
|
2.4
|
21.5
|
0.5
|
|
C14
|
A:WDI201
|
2.5
|
16.7
|
0.5
|
|
H29
|
A:WDI201
|
2.6
|
18.2
|
0.5
|
|
C09
|
A:WDI201
|
2.6
|
18.3
|
0.5
|
|
F20
|
A:WDI201
|
2.6
|
21.9
|
0.5
|
|
HB3
|
A:ALA75
|
2.8
|
17.2
|
1.0
|
|
C09
|
A:WDI201
|
2.9
|
19.5
|
0.5
|
|
HB3
|
A:ASP76
|
2.9
|
16.3
|
1.0
|
|
H
|
A:ASP76
|
3.0
|
14.8
|
1.0
|
|
OD1
|
A:ASP76
|
3.2
|
16.1
|
1.0
|
|
N
|
A:ASP76
|
3.5
|
14.8
|
1.0
|
|
CB
|
A:ASP76
|
3.6
|
15.4
|
1.0
|
|
C10
|
A:WDI201
|
3.6
|
16.9
|
0.5
|
|
CG
|
A:ASP76
|
3.6
|
15.6
|
1.0
|
|
CB
|
A:ALA75
|
3.8
|
17.3
|
1.0
|
|
C10
|
A:WDI201
|
3.8
|
14.7
|
0.5
|
|
H30
|
A:WDI201
|
3.9
|
15.7
|
0.5
|
|
H
|
A:ALA75
|
3.9
|
14.7
|
1.0
|
|
HH21
|
A:ARG78
|
3.9
|
14.1
|
1.0
|
|
HG21
|
A:VAL25
|
4.0
|
11.6
|
1.0
|
|
C05
|
A:WDI201
|
4.0
|
16.0
|
0.5
|
|
C
|
A:ALA75
|
4.1
|
15.6
|
1.0
|
|
CA
|
A:ASP76
|
4.1
|
16.5
|
1.0
|
|
HB1
|
A:ALA75
|
4.2
|
16.7
|
1.0
|
|
H30
|
A:WDI201
|
4.2
|
13.3
|
0.5
|
|
CA
|
A:ALA75
|
4.2
|
16.5
|
1.0
|
|
C05
|
A:WDI201
|
4.3
|
17.6
|
0.5
|
|
N
|
A:ALA75
|
4.3
|
14.5
|
1.0
|
|
HB2
|
A:ALA75
|
4.3
|
16.6
|
1.0
|
|
HB2
|
A:ASP76
|
4.4
|
16.0
|
1.0
|
|
HA
|
A:ASP76
|
4.4
|
16.6
|
1.0
|
|
HB
|
A:THR74
|
4.5
|
13.3
|
1.0
|
|
HE2
|
A:PHE57
|
4.5
|
26.3
|
1.0
|
|
H27
|
A:WDI201
|
4.5
|
16.0
|
0.5
|
|
HZ
|
A:PHE16
|
4.5
|
14.8
|
1.0
|
|
HG2
|
A:MET20
|
4.5
|
12.0
|
1.0
|
|
HG1
|
A:THR74
|
4.6
|
13.9
|
1.0
|
|
OD2
|
A:ASP76
|
4.6
|
16.9
|
1.0
|
|
NH2
|
A:ARG78
|
4.7
|
14.1
|
1.0
|
|
C06
|
A:WDI201
|
4.8
|
17.4
|
0.5
|
|
HH22
|
A:ARG78
|
4.8
|
14.0
|
1.0
|
|
H27
|
A:WDI201
|
4.8
|
16.9
|
0.5
|
|
C06
|
A:WDI201
|
4.9
|
13.2
|
0.5
|
|
HG11
|
A:VAL25
|
4.9
|
11.4
|
1.0
|
|
HB1
|
A:ALA33
|
4.9
|
14.2
|
1.0
|
|
CG2
|
A:VAL25
|
4.9
|
11.9
|
1.0
|
|
O
|
A:ALA75
|
4.9
|
19.3
|
1.0
|
|
SD
|
A:MET20
|
4.9
|
12.5
|
1.0
|
|
O
|
A:HOH409
|
4.9
|
15.8
|
1.0
|
|
C02
|
A:WDI201
|
4.9
|
13.4
|
0.5
|
|
Fluorine binding site 2 out
of 6 in 7fz2
Go back to
Fluorine Binding Sites List in 7fz2
Fluorine binding site 2 out
of 6 in the Crystal Structure of Human FABP4 in Complex with [3-Oxo-5-[4- (Trifluoromethyl)Phenyl]Cyclohexen-1-Yl] Acetate
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Crystal Structure of Human FABP4 in Complex with [3-Oxo-5-[4- (Trifluoromethyl)Phenyl]Cyclohexen-1-Yl] Acetate within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F201
b:31.3
occ:0.50
|
F19
|
A:WDI201
|
0.0
|
31.3
|
0.5
|
|
F19
|
A:WDI201
|
1.3
|
20.1
|
0.5
|
|
C16
|
A:WDI201
|
1.3
|
25.0
|
0.5
|
|
C16
|
A:WDI201
|
1.3
|
23.9
|
0.5
|
|
F20
|
A:WDI201
|
1.4
|
31.8
|
0.5
|
|
C14
|
A:WDI201
|
2.1
|
21.5
|
0.5
|
|
F20
|
A:WDI201
|
2.2
|
21.9
|
0.5
|
|
C14
|
A:WDI201
|
2.2
|
16.7
|
0.5
|
|
F21
|
A:WDI201
|
2.2
|
25.6
|
0.5
|
|
F21
|
A:WDI201
|
2.5
|
37.3
|
0.5
|
|
OD1
|
A:ASP76
|
2.6
|
16.1
|
1.0
|
|
H29
|
A:WDI201
|
2.6
|
16.8
|
0.5
|
|
C09
|
A:WDI201
|
2.7
|
18.3
|
0.5
|
|
H
|
A:ASP76
|
2.8
|
14.8
|
1.0
|
|
H29
|
A:WDI201
|
2.8
|
18.2
|
0.5
|
|
C09
|
A:WDI201
|
2.8
|
19.5
|
0.5
|
|
HH21
|
A:ARG78
|
2.9
|
14.1
|
1.0
|
|
HB3
|
A:ALA75
|
3.1
|
17.2
|
1.0
|
|
C10
|
A:WDI201
|
3.2
|
16.9
|
0.5
|
|
C10
|
A:WDI201
|
3.3
|
14.7
|
0.5
|
|
H
|
A:ALA75
|
3.3
|
14.7
|
1.0
|
|
CG
|
A:ASP76
|
3.3
|
15.6
|
1.0
|
|
HB
|
A:THR74
|
3.3
|
13.3
|
1.0
|
|
HB3
|
A:ASP76
|
3.4
|
16.3
|
1.0
|
|
H30
|
A:WDI201
|
3.4
|
15.7
|
0.5
|
|
N
|
A:ASP76
|
3.5
|
14.8
|
1.0
|
|
H30
|
A:WDI201
|
3.6
|
13.3
|
0.5
|
|
NH2
|
A:ARG78
|
3.6
|
14.1
|
1.0
|
|
HH22
|
A:ARG78
|
3.7
|
14.0
|
1.0
|
|
HG1
|
A:THR74
|
3.7
|
13.9
|
1.0
|
|
CB
|
A:ASP76
|
3.8
|
15.4
|
1.0
|
|
N
|
A:ALA75
|
3.8
|
14.5
|
1.0
|
|
CB
|
A:ALA75
|
3.9
|
17.3
|
1.0
|
|
C05
|
A:WDI201
|
4.0
|
16.0
|
0.5
|
|
C05
|
A:WDI201
|
4.1
|
17.6
|
0.5
|
|
O
|
A:HOH409
|
4.2
|
15.8
|
1.0
|
|
CA
|
A:ALA75
|
4.2
|
16.5
|
1.0
|
|
CB
|
A:THR74
|
4.2
|
12.7
|
1.0
|
|
C
|
A:ALA75
|
4.2
|
15.6
|
1.0
|
|
CA
|
A:ASP76
|
4.2
|
16.5
|
1.0
|
|
OD2
|
A:ASP76
|
4.3
|
16.9
|
1.0
|
|
OG1
|
A:THR74
|
4.3
|
13.8
|
1.0
|
|
HB2
|
A:ALA75
|
4.4
|
16.6
|
1.0
|
|
C06
|
A:WDI201
|
4.4
|
17.4
|
0.5
|
|
C06
|
A:WDI201
|
4.4
|
13.2
|
0.5
|
|
O
|
A:HOH421
|
4.4
|
14.2
|
1.0
|
|
HG21
|
A:VAL25
|
4.4
|
11.6
|
1.0
|
|
HB1
|
A:ALA75
|
4.6
|
16.7
|
1.0
|
|
H27
|
A:WDI201
|
4.6
|
16.0
|
0.5
|
|
O
|
A:HOH343
|
4.6
|
12.9
|
1.0
|
|
C
|
A:THR74
|
4.7
|
14.8
|
1.0
|
|
HE
|
A:ARG78
|
4.7
|
14.4
|
1.0
|
|
HB2
|
A:ASP76
|
4.7
|
16.0
|
1.0
|
|
C02
|
A:WDI201
|
4.7
|
13.4
|
0.5
|
|
H27
|
A:WDI201
|
4.8
|
16.9
|
0.5
|
|
C02
|
A:WDI201
|
4.8
|
13.9
|
0.5
|
|
HA
|
A:ASP76
|
4.8
|
16.6
|
1.0
|
|
CZ
|
A:ARG78
|
4.8
|
13.6
|
1.0
|
|
HG21
|
A:THR74
|
4.9
|
12.9
|
1.0
|
|
CA
|
A:THR74
|
5.0
|
13.5
|
1.0
|
|
Fluorine binding site 3 out
of 6 in 7fz2
Go back to
Fluorine Binding Sites List in 7fz2
Fluorine binding site 3 out
of 6 in the Crystal Structure of Human FABP4 in Complex with [3-Oxo-5-[4- (Trifluoromethyl)Phenyl]Cyclohexen-1-Yl] Acetate
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Crystal Structure of Human FABP4 in Complex with [3-Oxo-5-[4- (Trifluoromethyl)Phenyl]Cyclohexen-1-Yl] Acetate within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F201
b:31.8
occ:0.50
|
F20
|
A:WDI201
|
0.0
|
31.8
|
0.5
|
|
F20
|
A:WDI201
|
1.0
|
21.9
|
0.5
|
|
C16
|
A:WDI201
|
1.2
|
23.9
|
0.5
|
|
C16
|
A:WDI201
|
1.3
|
25.0
|
0.5
|
|
F19
|
A:WDI201
|
1.4
|
31.3
|
0.5
|
|
HH21
|
A:ARG78
|
2.0
|
14.1
|
1.0
|
|
F21
|
A:WDI201
|
2.1
|
37.3
|
0.5
|
|
F19
|
A:WDI201
|
2.2
|
20.1
|
0.5
|
|
C14
|
A:WDI201
|
2.3
|
16.7
|
0.5
|
|
C14
|
A:WDI201
|
2.3
|
21.5
|
0.5
|
|
F21
|
A:WDI201
|
2.4
|
25.6
|
0.5
|
|
H30
|
A:WDI201
|
2.6
|
15.7
|
0.5
|
|
OD1
|
A:ASP76
|
2.6
|
16.1
|
1.0
|
|
NH2
|
A:ARG78
|
2.7
|
14.1
|
1.0
|
|
HH22
|
A:ARG78
|
2.7
|
14.0
|
1.0
|
|
C10
|
A:WDI201
|
2.8
|
16.9
|
0.5
|
|
H30
|
A:WDI201
|
2.8
|
13.3
|
0.5
|
|
C10
|
A:WDI201
|
2.9
|
14.7
|
0.5
|
|
CG
|
A:ASP76
|
3.3
|
15.6
|
1.0
|
|
C09
|
A:WDI201
|
3.3
|
18.3
|
0.5
|
|
C09
|
A:WDI201
|
3.4
|
19.5
|
0.5
|
|
H29
|
A:WDI201
|
3.5
|
16.8
|
0.5
|
|
O
|
A:HOH343
|
3.6
|
12.9
|
1.0
|
|
HB
|
A:THR74
|
3.7
|
13.3
|
1.0
|
|
H
|
A:ASP76
|
3.7
|
14.8
|
1.0
|
|
H29
|
A:WDI201
|
3.7
|
18.2
|
0.5
|
|
HB3
|
A:ASP76
|
3.8
|
16.3
|
1.0
|
|
CZ
|
A:ARG78
|
3.9
|
13.6
|
1.0
|
|
HE
|
A:ARG78
|
3.9
|
14.4
|
1.0
|
|
OD2
|
A:ASP76
|
3.9
|
16.9
|
1.0
|
|
HG1
|
A:THR74
|
4.0
|
13.9
|
1.0
|
|
HG21
|
A:VAL25
|
4.0
|
11.6
|
1.0
|
|
HG11
|
A:VAL23
|
4.0
|
14.1
|
1.0
|
|
C06
|
A:WDI201
|
4.1
|
17.4
|
0.5
|
|
CB
|
A:ASP76
|
4.1
|
15.4
|
1.0
|
|
C06
|
A:WDI201
|
4.2
|
13.2
|
0.5
|
|
HE2
|
A:TYR19
|
4.3
|
10.0
|
1.0
|
|
NE
|
A:ARG78
|
4.3
|
14.3
|
1.0
|
|
O
|
A:HOH421
|
4.4
|
14.2
|
1.0
|
|
H
|
A:ALA75
|
4.4
|
14.7
|
1.0
|
|
HB3
|
A:ALA75
|
4.4
|
17.2
|
1.0
|
|
N
|
A:ASP76
|
4.5
|
14.8
|
1.0
|
|
CB
|
A:THR74
|
4.5
|
12.7
|
1.0
|
|
OG1
|
A:THR74
|
4.5
|
13.8
|
1.0
|
|
C05
|
A:WDI201
|
4.5
|
16.0
|
0.5
|
|
HG2
|
A:MET20
|
4.5
|
12.0
|
1.0
|
|
C05
|
A:WDI201
|
4.6
|
17.6
|
0.5
|
|
HG22
|
A:VAL25
|
4.6
|
12.4
|
1.0
|
|
H28
|
A:WDI201
|
4.6
|
16.3
|
0.5
|
|
CG2
|
A:VAL25
|
4.7
|
11.9
|
1.0
|
|
HG21
|
A:THR74
|
4.7
|
12.9
|
1.0
|
|
HG23
|
A:VAL25
|
4.7
|
11.6
|
1.0
|
|
H28
|
A:WDI201
|
4.8
|
14.1
|
0.5
|
|
C02
|
A:WDI201
|
4.9
|
13.9
|
0.5
|
|
HG12
|
A:VAL23
|
4.9
|
14.2
|
1.0
|
|
CG1
|
A:VAL23
|
4.9
|
14.6
|
1.0
|
|
C02
|
A:WDI201
|
4.9
|
13.4
|
0.5
|
|
HB2
|
A:ASP76
|
4.9
|
16.0
|
1.0
|
|
N
|
A:ALA75
|
4.9
|
14.5
|
1.0
|
|
NH1
|
A:ARG78
|
4.9
|
13.5
|
1.0
|
|
HG21
|
A:VAL23
|
4.9
|
13.2
|
1.0
|
|
O
|
A:HOH409
|
4.9
|
15.8
|
1.0
|
|
HH12
|
A:ARG78
|
5.0
|
13.4
|
1.0
|
|
CA
|
A:ASP76
|
5.0
|
16.5
|
1.0
|
|
Fluorine binding site 4 out
of 6 in 7fz2
Go back to
Fluorine Binding Sites List in 7fz2
Fluorine binding site 4 out
of 6 in the Crystal Structure of Human FABP4 in Complex with [3-Oxo-5-[4- (Trifluoromethyl)Phenyl]Cyclohexen-1-Yl] Acetate
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Crystal Structure of Human FABP4 in Complex with [3-Oxo-5-[4- (Trifluoromethyl)Phenyl]Cyclohexen-1-Yl] Acetate within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F201
b:21.9
occ:0.50
|
F20
|
A:WDI201
|
0.0
|
21.9
|
0.5
|
|
F20
|
A:WDI201
|
1.0
|
31.8
|
0.5
|
|
C16
|
A:WDI201
|
1.3
|
23.9
|
0.5
|
|
C16
|
A:WDI201
|
1.5
|
25.0
|
0.5
|
|
F21
|
A:WDI201
|
1.6
|
37.3
|
0.5
|
|
H30
|
A:WDI201
|
2.1
|
15.7
|
0.5
|
|
F21
|
A:WDI201
|
2.2
|
25.6
|
0.5
|
|
F19
|
A:WDI201
|
2.2
|
31.3
|
0.5
|
|
C14
|
A:WDI201
|
2.3
|
16.7
|
0.5
|
|
C14
|
A:WDI201
|
2.4
|
21.5
|
0.5
|
|
H30
|
A:WDI201
|
2.5
|
13.3
|
0.5
|
|
C10
|
A:WDI201
|
2.5
|
16.9
|
0.5
|
|
HH21
|
A:ARG78
|
2.5
|
14.1
|
1.0
|
|
F19
|
A:WDI201
|
2.6
|
20.1
|
0.5
|
|
C10
|
A:WDI201
|
2.7
|
14.7
|
0.5
|
|
HH22
|
A:ARG78
|
3.0
|
14.0
|
1.0
|
|
NH2
|
A:ARG78
|
3.0
|
14.1
|
1.0
|
|
OD1
|
A:ASP76
|
3.4
|
16.1
|
1.0
|
|
HE2
|
A:TYR19
|
3.5
|
10.0
|
1.0
|
|
C09
|
A:WDI201
|
3.5
|
18.3
|
0.5
|
|
HG11
|
A:VAL23
|
3.6
|
14.1
|
1.0
|
|
HG21
|
A:VAL25
|
3.6
|
11.6
|
1.0
|
|
O
|
A:HOH343
|
3.6
|
12.9
|
1.0
|
|
C09
|
A:WDI201
|
3.7
|
19.5
|
0.5
|
|
HG2
|
A:MET20
|
3.7
|
12.0
|
1.0
|
|
CG
|
A:ASP76
|
3.8
|
15.6
|
1.0
|
|
H29
|
A:WDI201
|
3.8
|
16.8
|
0.5
|
|
C06
|
A:WDI201
|
3.9
|
17.4
|
0.5
|
|
C06
|
A:WDI201
|
4.1
|
13.2
|
0.5
|
|
H29
|
A:WDI201
|
4.1
|
18.2
|
0.5
|
|
HE
|
A:ARG78
|
4.1
|
14.4
|
1.0
|
|
HG23
|
A:VAL25
|
4.1
|
11.6
|
1.0
|
|
HB3
|
A:ASP76
|
4.1
|
16.3
|
1.0
|
|
CZ
|
A:ARG78
|
4.2
|
13.6
|
1.0
|
|
HG21
|
A:VAL23
|
4.2
|
13.2
|
1.0
|
|
OD2
|
A:ASP76
|
4.2
|
16.9
|
1.0
|
|
CG2
|
A:VAL25
|
4.2
|
11.9
|
1.0
|
|
HG22
|
A:VAL25
|
4.3
|
12.4
|
1.0
|
|
CE2
|
A:TYR19
|
4.3
|
9.6
|
1.0
|
|
H28
|
A:WDI201
|
4.3
|
16.3
|
0.5
|
|
CG1
|
A:VAL23
|
4.4
|
14.6
|
1.0
|
|
HG12
|
A:VAL23
|
4.5
|
14.2
|
1.0
|
|
H
|
A:ASP76
|
4.6
|
14.8
|
1.0
|
|
CB
|
A:ASP76
|
4.6
|
15.4
|
1.0
|
|
HA
|
A:MET20
|
4.6
|
9.6
|
1.0
|
|
HB
|
A:THR74
|
4.6
|
13.3
|
1.0
|
|
NE
|
A:ARG78
|
4.6
|
14.3
|
1.0
|
|
HZ
|
A:PHE16
|
4.6
|
14.8
|
1.0
|
|
HB
|
A:VAL23
|
4.6
|
13.3
|
1.0
|
|
CG
|
A:MET20
|
4.7
|
11.0
|
1.0
|
|
C05
|
A:WDI201
|
4.7
|
16.0
|
0.5
|
|
H28
|
A:WDI201
|
4.7
|
14.1
|
0.5
|
|
C05
|
A:WDI201
|
4.7
|
17.6
|
0.5
|
|
HG1
|
A:THR74
|
4.8
|
13.9
|
1.0
|
|
C02
|
A:WDI201
|
4.8
|
13.9
|
0.5
|
|
O
|
A:HOH421
|
4.9
|
14.2
|
1.0
|
|
HD2
|
A:TYR19
|
4.9
|
9.3
|
1.0
|
|
C02
|
A:WDI201
|
4.9
|
13.4
|
0.5
|
|
CB
|
A:VAL23
|
4.9
|
13.2
|
1.0
|
|
CG2
|
A:VAL23
|
5.0
|
13.6
|
1.0
|
|
OH
|
A:TYR19
|
5.0
|
10.5
|
1.0
|
|
Fluorine binding site 5 out
of 6 in 7fz2
Go back to
Fluorine Binding Sites List in 7fz2
Fluorine binding site 5 out
of 6 in the Crystal Structure of Human FABP4 in Complex with [3-Oxo-5-[4- (Trifluoromethyl)Phenyl]Cyclohexen-1-Yl] Acetate
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Crystal Structure of Human FABP4 in Complex with [3-Oxo-5-[4- (Trifluoromethyl)Phenyl]Cyclohexen-1-Yl] Acetate within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F201
b:37.3
occ:0.50
|
F21
|
A:WDI201
|
0.0
|
37.3
|
0.5
|
|
F21
|
A:WDI201
|
0.9
|
25.6
|
0.5
|
|
C16
|
A:WDI201
|
1.3
|
23.9
|
0.5
|
|
C16
|
A:WDI201
|
1.4
|
25.0
|
0.5
|
|
F20
|
A:WDI201
|
1.6
|
21.9
|
0.5
|
|
F20
|
A:WDI201
|
2.1
|
31.8
|
0.5
|
|
F19
|
A:WDI201
|
2.2
|
20.1
|
0.5
|
|
C14
|
A:WDI201
|
2.3
|
16.7
|
0.5
|
|
C14
|
A:WDI201
|
2.3
|
21.5
|
0.5
|
|
F19
|
A:WDI201
|
2.5
|
31.3
|
0.5
|
|
HG2
|
A:MET20
|
2.6
|
12.0
|
1.0
|
|
H30
|
A:WDI201
|
2.6
|
15.7
|
0.5
|
|
C10
|
A:WDI201
|
2.8
|
16.9
|
0.5
|
|
C09
|
A:WDI201
|
3.1
|
18.3
|
0.5
|
|
C10
|
A:WDI201
|
3.1
|
14.7
|
0.5
|
|
H29
|
A:WDI201
|
3.2
|
16.8
|
0.5
|
|
HG21
|
A:VAL25
|
3.2
|
11.6
|
1.0
|
|
H30
|
A:WDI201
|
3.2
|
13.3
|
0.5
|
|
C09
|
A:WDI201
|
3.4
|
19.5
|
0.5
|
|
CG
|
A:MET20
|
3.5
|
11.0
|
1.0
|
|
HZ
|
A:PHE16
|
3.6
|
14.8
|
1.0
|
|
H29
|
A:WDI201
|
3.7
|
18.2
|
0.5
|
|
SD
|
A:MET20
|
3.8
|
12.5
|
1.0
|
|
HE2
|
A:TYR19
|
3.9
|
10.0
|
1.0
|
|
HG3
|
A:MET20
|
3.9
|
11.0
|
1.0
|
|
HB3
|
A:ASP76
|
3.9
|
16.3
|
1.0
|
|
HH21
|
A:ARG78
|
4.0
|
14.1
|
1.0
|
|
CG2
|
A:VAL25
|
4.0
|
11.9
|
1.0
|
|
HG23
|
A:VAL25
|
4.0
|
11.6
|
1.0
|
|
C06
|
A:WDI201
|
4.1
|
17.4
|
0.5
|
|
CZ
|
A:PHE16
|
4.1
|
16.5
|
1.0
|
|
OD1
|
A:ASP76
|
4.2
|
16.1
|
1.0
|
|
HA
|
A:MET20
|
4.2
|
9.6
|
1.0
|
|
C05
|
A:WDI201
|
4.3
|
16.0
|
0.5
|
|
C06
|
A:WDI201
|
4.3
|
13.2
|
0.5
|
|
CG
|
A:ASP76
|
4.4
|
15.6
|
1.0
|
|
HG22
|
A:VAL25
|
4.4
|
12.4
|
1.0
|
|
CB
|
A:MET20
|
4.5
|
10.3
|
1.0
|
|
HG11
|
A:VAL25
|
4.5
|
11.4
|
1.0
|
|
HB3
|
A:MET20
|
4.5
|
10.2
|
1.0
|
|
C05
|
A:WDI201
|
4.5
|
17.6
|
0.5
|
|
HD2
|
A:TYR19
|
4.6
|
9.3
|
1.0
|
|
NH2
|
A:ARG78
|
4.6
|
14.1
|
1.0
|
|
HH22
|
A:ARG78
|
4.6
|
14.0
|
1.0
|
|
H28
|
A:WDI201
|
4.6
|
16.3
|
0.5
|
|
CE2
|
A:TYR19
|
4.7
|
9.6
|
1.0
|
|
CB
|
A:ASP76
|
4.7
|
15.4
|
1.0
|
|
HE1
|
A:PHE16
|
4.7
|
15.5
|
1.0
|
|
CE1
|
A:PHE16
|
4.7
|
15.9
|
1.0
|
|
HE2
|
A:PHE16
|
4.7
|
14.4
|
1.0
|
|
HG11
|
A:VAL23
|
4.8
|
14.1
|
1.0
|
|
CE2
|
A:PHE16
|
4.8
|
15.5
|
1.0
|
|
C02
|
A:WDI201
|
4.8
|
13.9
|
0.5
|
|
H
|
A:ASP76
|
4.9
|
14.8
|
1.0
|
|
OD2
|
A:ASP76
|
4.9
|
16.9
|
1.0
|
|
C02
|
A:WDI201
|
4.9
|
13.4
|
0.5
|
|
CA
|
A:MET20
|
4.9
|
9.3
|
1.0
|
|
HB3
|
A:ALA75
|
4.9
|
17.2
|
1.0
|
|
HG21
|
A:VAL23
|
5.0
|
13.2
|
1.0
|
|
Fluorine binding site 6 out
of 6 in 7fz2
Go back to
Fluorine Binding Sites List in 7fz2
Fluorine binding site 6 out
of 6 in the Crystal Structure of Human FABP4 in Complex with [3-Oxo-5-[4- (Trifluoromethyl)Phenyl]Cyclohexen-1-Yl] Acetate
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Crystal Structure of Human FABP4 in Complex with [3-Oxo-5-[4- (Trifluoromethyl)Phenyl]Cyclohexen-1-Yl] Acetate within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F201
b:25.6
occ:0.50
|
F21
|
A:WDI201
|
0.0
|
25.6
|
0.5
|
|
F21
|
A:WDI201
|
0.9
|
37.3
|
0.5
|
|
C16
|
A:WDI201
|
1.3
|
25.0
|
0.5
|
|
C16
|
A:WDI201
|
1.4
|
23.9
|
0.5
|
|
F19
|
A:WDI201
|
1.5
|
20.1
|
0.5
|
|
F20
|
A:WDI201
|
2.2
|
21.9
|
0.5
|
|
F19
|
A:WDI201
|
2.2
|
31.3
|
0.5
|
|
C14
|
A:WDI201
|
2.3
|
21.5
|
0.5
|
|
F20
|
A:WDI201
|
2.4
|
31.8
|
0.5
|
|
C14
|
A:WDI201
|
2.4
|
16.7
|
0.5
|
|
H29
|
A:WDI201
|
2.7
|
16.8
|
0.5
|
|
C09
|
A:WDI201
|
2.9
|
18.3
|
0.5
|
|
HG2
|
A:MET20
|
3.1
|
12.0
|
1.0
|
|
C09
|
A:WDI201
|
3.2
|
19.5
|
0.5
|
|
C10
|
A:WDI201
|
3.2
|
16.9
|
0.5
|
|
H30
|
A:WDI201
|
3.2
|
15.7
|
0.5
|
|
H29
|
A:WDI201
|
3.2
|
18.2
|
0.5
|
|
HG21
|
A:VAL25
|
3.3
|
11.6
|
1.0
|
|
HB3
|
A:ASP76
|
3.4
|
16.3
|
1.0
|
|
C10
|
A:WDI201
|
3.5
|
14.7
|
0.5
|
|
HZ
|
A:PHE16
|
3.7
|
14.8
|
1.0
|
|
SD
|
A:MET20
|
3.7
|
12.5
|
1.0
|
|
H30
|
A:WDI201
|
3.8
|
13.3
|
0.5
|
|
CG
|
A:MET20
|
3.8
|
11.0
|
1.0
|
|
OD1
|
A:ASP76
|
4.0
|
16.1
|
1.0
|
|
CG2
|
A:VAL25
|
4.2
|
11.9
|
1.0
|
|
C05
|
A:WDI201
|
4.2
|
16.0
|
0.5
|
|
CG
|
A:ASP76
|
4.2
|
15.6
|
1.0
|
|
HB3
|
A:ALA75
|
4.2
|
17.2
|
1.0
|
|
CB
|
A:ASP76
|
4.2
|
15.4
|
1.0
|
|
HH21
|
A:ARG78
|
4.2
|
14.1
|
1.0
|
|
HG11
|
A:VAL25
|
4.3
|
11.4
|
1.0
|
|
CZ
|
A:PHE16
|
4.3
|
16.5
|
1.0
|
|
HG3
|
A:MET20
|
4.3
|
11.0
|
1.0
|
|
H
|
A:ASP76
|
4.3
|
14.8
|
1.0
|
|
HG23
|
A:VAL25
|
4.3
|
11.6
|
1.0
|
|
C05
|
A:WDI201
|
4.4
|
17.6
|
0.5
|
|
C06
|
A:WDI201
|
4.4
|
17.4
|
0.5
|
|
HG22
|
A:VAL25
|
4.5
|
12.4
|
1.0
|
|
HE2
|
A:PHE16
|
4.6
|
14.4
|
1.0
|
|
C06
|
A:WDI201
|
4.6
|
13.2
|
0.5
|
|
HB1
|
A:ALA33
|
4.7
|
14.2
|
1.0
|
|
HE2
|
A:TYR19
|
4.7
|
10.0
|
1.0
|
|
H27
|
A:WDI201
|
4.8
|
16.0
|
0.5
|
|
CE2
|
A:PHE16
|
4.8
|
15.5
|
1.0
|
|
N
|
A:ASP76
|
4.8
|
14.8
|
1.0
|
|
HB3
|
A:MET20
|
4.8
|
10.2
|
1.0
|
|
OD2
|
A:ASP76
|
4.9
|
16.9
|
1.0
|
|
HA
|
A:MET20
|
4.9
|
9.6
|
1.0
|
|
HB2
|
A:ASP76
|
4.9
|
16.0
|
1.0
|
|
CB
|
A:MET20
|
4.9
|
10.3
|
1.0
|
|
C02
|
A:WDI201
|
4.9
|
13.4
|
0.5
|
|
NH2
|
A:ARG78
|
4.9
|
14.1
|
1.0
|
|
C02
|
A:WDI201
|
5.0
|
13.9
|
0.5
|
|
Reference:
U.Obst,
C.Magnone,
B.Kuhn,
M.G.Rudolph.
Crystal Structure of A Human FABP4 Complex To Be Published.
Page generated: Fri Aug 2 07:20:18 2024
|
