Fluorine in PDB 7g18: Crystal Structure of Human FABP4 in Complex with 4-(4-Chloro-3- Fluorophenoxy)-2-(3,4-Dichlorophenyl)-2-Methylbutanoic Acid
Protein crystallography data
The structure of Crystal Structure of Human FABP4 in Complex with 4-(4-Chloro-3- Fluorophenoxy)-2-(3,4-Dichlorophenyl)-2-Methylbutanoic Acid, PDB code: 7g18
was solved by
A.Ehler,
J.Benz,
U.Obst,
M.Nettekoven,
M.G.Rudolph,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
37.69 /
1.12
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
32.567,
53.698,
75.398,
90,
90,
90
|
R / Rfree (%)
|
13.9 /
17
|
Other elements in 7g18:
The structure of Crystal Structure of Human FABP4 in Complex with 4-(4-Chloro-3- Fluorophenoxy)-2-(3,4-Dichlorophenyl)-2-Methylbutanoic Acid also contains other interesting chemical elements:
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Crystal Structure of Human FABP4 in Complex with 4-(4-Chloro-3- Fluorophenoxy)-2-(3,4-Dichlorophenyl)-2-Methylbutanoic Acid
(pdb code 7g18). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the
Crystal Structure of Human FABP4 in Complex with 4-(4-Chloro-3- Fluorophenoxy)-2-(3,4-Dichlorophenyl)-2-Methylbutanoic Acid, PDB code: 7g18:
Jump to Fluorine binding site number:
1;
2;
Fluorine binding site 1 out
of 2 in 7g18
Go back to
Fluorine Binding Sites List in 7g18
Fluorine binding site 1 out
of 2 in the Crystal Structure of Human FABP4 in Complex with 4-(4-Chloro-3- Fluorophenoxy)-2-(3,4-Dichlorophenyl)-2-Methylbutanoic Acid
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Crystal Structure of Human FABP4 in Complex with 4-(4-Chloro-3- Fluorophenoxy)-2-(3,4-Dichlorophenyl)-2-Methylbutanoic Acid within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F204
b:20.1
occ:0.50
|
F15
|
A:WMW204
|
0.0
|
20.1
|
0.5
|
H29
|
A:WMW204
|
0.5
|
17.5
|
0.5
|
C13
|
A:WMW204
|
0.9
|
18.7
|
0.5
|
C5
|
A:WMW204
|
1.3
|
16.5
|
0.5
|
C9
|
A:WMW204
|
1.7
|
14.8
|
0.5
|
C20
|
A:WMW204
|
2.2
|
21.5
|
0.5
|
C7
|
A:WMW204
|
2.3
|
17.9
|
0.5
|
CL19
|
A:WMW204
|
2.4
|
19.7
|
0.5
|
C9
|
A:WMW204
|
2.4
|
15.0
|
0.5
|
H26
|
A:WMW204
|
2.5
|
16.8
|
0.5
|
H31
|
A:WMW204
|
2.6
|
19.6
|
0.5
|
HB3
|
A:ALA75
|
2.9
|
15.4
|
1.0
|
HE2
|
A:PHE57
|
2.9
|
18.3
|
1.0
|
C5
|
A:WMW204
|
3.0
|
21.6
|
0.5
|
CL19
|
A:WMW204
|
3.0
|
22.2
|
0.5
|
HB3
|
A:ASP76
|
3.2
|
15.4
|
1.0
|
C14
|
A:WMW204
|
3.3
|
19.9
|
0.5
|
HB1
|
A:ALA33
|
3.3
|
10.4
|
1.0
|
C7
|
A:WMW204
|
3.6
|
23.4
|
0.5
|
C14
|
A:WMW204
|
3.6
|
16.2
|
0.5
|
C13
|
A:WMW204
|
3.7
|
14.7
|
0.5
|
H
|
A:ASP76
|
3.7
|
13.5
|
1.0
|
CE2
|
A:PHE57
|
3.8
|
20.1
|
1.0
|
CB
|
A:ALA75
|
3.8
|
16.1
|
1.0
|
HB2
|
A:ALA33
|
3.8
|
10.8
|
1.0
|
HZ
|
A:PHE16
|
3.9
|
14.3
|
1.0
|
CL16
|
A:WMW204
|
3.9
|
19.2
|
0.5
|
CL16
|
A:WMW204
|
3.9
|
19.1
|
0.5
|
HB1
|
A:ALA75
|
3.9
|
15.3
|
1.0
|
CB
|
A:ALA33
|
3.9
|
11.2
|
1.0
|
N
|
A:ASP76
|
4.0
|
14.1
|
1.0
|
F15
|
A:WMW204
|
4.1
|
26.4
|
0.5
|
CB
|
A:ASP76
|
4.1
|
15.0
|
1.0
|
OD1
|
A:ASP76
|
4.2
|
13.7
|
1.0
|
C20
|
A:WMW204
|
4.2
|
17.8
|
0.5
|
C6
|
A:WMW204
|
4.2
|
16.5
|
0.5
|
HB3
|
A:ALA33
|
4.3
|
10.8
|
1.0
|
C6
|
A:WMW204
|
4.3
|
16.7
|
0.5
|
HD2
|
A:PHE57
|
4.4
|
16.5
|
1.0
|
HB2
|
A:ALA75
|
4.4
|
15.5
|
1.0
|
C
|
A:ALA75
|
4.5
|
14.3
|
1.0
|
O22
|
A:WMW204
|
4.5
|
25.3
|
0.5
|
CG
|
A:ASP76
|
4.5
|
13.6
|
1.0
|
H29
|
A:WMW204
|
4.5
|
15.6
|
0.5
|
H25
|
A:WMW204
|
4.5
|
15.8
|
0.5
|
H26
|
A:WMW204
|
4.5
|
19.3
|
0.5
|
CD2
|
A:PHE57
|
4.6
|
17.7
|
1.0
|
HZ
|
A:PHE57
|
4.6
|
19.1
|
1.0
|
CA
|
A:ASP76
|
4.6
|
15.2
|
1.0
|
C4
|
A:WMW204
|
4.6
|
16.4
|
0.5
|
H25
|
A:WMW204
|
4.6
|
15.1
|
0.5
|
CA
|
A:ALA75
|
4.6
|
14.7
|
1.0
|
CZ
|
A:PHE57
|
4.7
|
19.2
|
1.0
|
HA
|
A:ASP76
|
4.7
|
15.2
|
1.0
|
CZ
|
A:PHE16
|
4.7
|
15.4
|
1.0
|
O22
|
A:WMW204
|
4.7
|
16.7
|
0.5
|
C4
|
A:WMW204
|
4.7
|
15.3
|
0.5
|
H
|
A:ALA75
|
4.7
|
13.3
|
1.0
|
HE2
|
A:PHE16
|
4.8
|
14.4
|
1.0
|
HB2
|
A:ASP76
|
4.8
|
15.2
|
1.0
|
SD
|
A:MET20
|
4.9
|
12.6
|
1.0
|
HG22
|
A:THR29
|
4.9
|
12.5
|
1.0
|
C8
|
A:WMW204
|
4.9
|
18.7
|
0.5
|
C8
|
A:WMW204
|
5.0
|
17.8
|
0.5
|
|
Fluorine binding site 2 out
of 2 in 7g18
Go back to
Fluorine Binding Sites List in 7g18
Fluorine binding site 2 out
of 2 in the Crystal Structure of Human FABP4 in Complex with 4-(4-Chloro-3- Fluorophenoxy)-2-(3,4-Dichlorophenyl)-2-Methylbutanoic Acid
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Crystal Structure of Human FABP4 in Complex with 4-(4-Chloro-3- Fluorophenoxy)-2-(3,4-Dichlorophenyl)-2-Methylbutanoic Acid within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F204
b:26.4
occ:0.50
|
F15
|
A:WMW204
|
0.0
|
26.4
|
0.5
|
H29
|
A:WMW204
|
1.2
|
15.6
|
0.5
|
C5
|
A:WMW204
|
1.4
|
21.6
|
0.5
|
C13
|
A:WMW204
|
1.6
|
14.7
|
0.5
|
CL19
|
A:WMW204
|
1.7
|
22.2
|
0.5
|
C9
|
A:WMW204
|
1.8
|
15.0
|
0.5
|
C7
|
A:WMW204
|
2.4
|
23.4
|
0.5
|
C9
|
A:WMW204
|
2.4
|
14.8
|
0.5
|
H26
|
A:WMW204
|
2.6
|
19.3
|
0.5
|
HG2
|
A:MET20
|
3.0
|
10.1
|
1.0
|
C20
|
A:WMW204
|
3.0
|
17.8
|
0.5
|
CL19
|
A:WMW204
|
3.0
|
19.7
|
0.5
|
HE2
|
A:TYR19
|
3.1
|
8.7
|
1.0
|
C5
|
A:WMW204
|
3.2
|
16.5
|
0.5
|
HH21
|
A:ARG78
|
3.2
|
12.5
|
1.0
|
HG21
|
A:VAL25
|
3.4
|
13.2
|
1.0
|
H31
|
A:WMW204
|
3.5
|
16.2
|
0.5
|
NH2
|
A:ARG78
|
3.6
|
12.7
|
1.0
|
C13
|
A:WMW204
|
3.6
|
18.7
|
0.5
|
HH22
|
A:ARG78
|
3.7
|
12.4
|
1.0
|
HG11
|
A:VAL23
|
3.7
|
13.0
|
1.0
|
C14
|
A:WMW204
|
3.7
|
19.9
|
0.5
|
HG21
|
A:VAL23
|
3.8
|
11.5
|
1.0
|
CE2
|
A:TYR19
|
3.9
|
9.2
|
1.0
|
OD1
|
A:ASP76
|
3.9
|
13.7
|
1.0
|
CG
|
A:MET20
|
3.9
|
10.4
|
1.0
|
C14
|
A:WMW204
|
3.9
|
16.2
|
0.5
|
C7
|
A:WMW204
|
4.0
|
17.9
|
0.5
|
HA
|
A:MET20
|
4.0
|
9.1
|
1.0
|
HG22
|
A:VAL25
|
4.0
|
12.2
|
1.0
|
HZ
|
A:PHE16
|
4.0
|
14.3
|
1.0
|
CG2
|
A:VAL25
|
4.1
|
12.6
|
1.0
|
F15
|
A:WMW204
|
4.1
|
20.1
|
0.5
|
O
|
A:HOH362
|
4.1
|
13.5
|
1.0
|
CG
|
A:ASP76
|
4.1
|
13.6
|
1.0
|
C20
|
A:WMW204
|
4.1
|
21.5
|
0.5
|
HD2
|
A:TYR19
|
4.2
|
8.7
|
1.0
|
HG23
|
A:VAL25
|
4.3
|
12.0
|
1.0
|
OD2
|
A:ASP76
|
4.3
|
14.5
|
1.0
|
HE1
|
A:PHE16
|
4.3
|
15.1
|
1.0
|
HB
|
A:VAL23
|
4.3
|
11.9
|
1.0
|
HG3
|
A:MET20
|
4.3
|
10.4
|
1.0
|
HE
|
A:ARG78
|
4.4
|
12.9
|
1.0
|
CG1
|
A:VAL23
|
4.4
|
13.3
|
1.0
|
H29
|
A:WMW204
|
4.4
|
17.5
|
0.5
|
HB3
|
A:ASP76
|
4.4
|
15.4
|
1.0
|
CD2
|
A:TYR19
|
4.5
|
9.5
|
1.0
|
HG12
|
A:VAL23
|
4.5
|
13.0
|
1.0
|
CZ
|
A:PHE16
|
4.5
|
15.4
|
1.0
|
CZ
|
A:ARG78
|
4.6
|
12.5
|
1.0
|
CG2
|
A:VAL23
|
4.6
|
12.6
|
1.0
|
CE1
|
A:PHE16
|
4.7
|
15.4
|
1.0
|
SD
|
A:MET20
|
4.7
|
12.6
|
1.0
|
CB
|
A:VAL23
|
4.7
|
12.2
|
1.0
|
H34
|
A:WMW204
|
4.8
|
25.3
|
0.5
|
CZ
|
A:TYR19
|
4.8
|
8.4
|
1.0
|
CB
|
A:MET20
|
4.8
|
9.9
|
1.0
|
OH
|
A:TYR19
|
4.8
|
10.2
|
1.0
|
CA
|
A:MET20
|
4.8
|
9.0
|
1.0
|
HB3
|
A:MET20
|
4.8
|
9.7
|
1.0
|
O22
|
A:WMW204
|
4.8
|
25.3
|
0.5
|
CB
|
A:ASP76
|
4.9
|
15.0
|
1.0
|
H26
|
A:WMW204
|
4.9
|
16.8
|
0.5
|
NE
|
A:ARG78
|
4.9
|
13.1
|
1.0
|
|
Reference:
U.Obst,
C.Magnone,
B.Kuhn,
M.G.Rudolph.
Crystal Structure of A Human FABP4 Complex To Be Published.
Page generated: Fri Aug 2 07:24:42 2024
|