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Fluorine in PDB 4uy0: Conserved Mechanisms of Microtubule-Stimulated Adp Release, Atp Binding, and Force Generation in Transport Kinesins

Other elements in 4uy0:

The structure of Conserved Mechanisms of Microtubule-Stimulated Adp Release, Atp Binding, and Force Generation in Transport Kinesins also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms
Aluminium (Al) 1 atom
Zinc (Zn) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Conserved Mechanisms of Microtubule-Stimulated Adp Release, Atp Binding, and Force Generation in Transport Kinesins (pdb code 4uy0). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 4 binding sites of Fluorine where determined in the Conserved Mechanisms of Microtubule-Stimulated Adp Release, Atp Binding, and Force Generation in Transport Kinesins, PDB code: 4uy0:
Jump to Fluorine binding site number: 1; 2; 3; 4;

Fluorine binding site 1 out of 4 in 4uy0

Go back to Fluorine Binding Sites List in 4uy0
Fluorine binding site 1 out of 4 in the Conserved Mechanisms of Microtubule-Stimulated Adp Release, Atp Binding, and Force Generation in Transport Kinesins


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Conserved Mechanisms of Microtubule-Stimulated Adp Release, Atp Binding, and Force Generation in Transport Kinesins within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F1341

b:35.1
occ:1.00
F1 C:ALF1341 0.0 35.1 1.0
AL C:ALF1341 1.8 35.1 1.0
F3 C:ALF1341 2.5 35.1 1.0
F4 C:ALF1341 2.6 35.1 1.0
O3B C:ADP1339 2.7 0.6 1.0
O2B C:ADP1339 3.1 0.6 1.0
MG C:MG1340 3.2 4.1 1.0
CA C:ALA234 3.3 50.6 1.0
PB C:ADP1339 3.5 0.6 1.0
F2 C:ALF1341 3.6 35.1 1.0
O1B C:ADP1339 4.4 0.6 1.0
CA C:SER203 4.5 0.4 1.0
CA C:GLY235 4.6 45.1 1.0
O3A C:ADP1339 4.8 0.6 1.0

Fluorine binding site 2 out of 4 in 4uy0

Go back to Fluorine Binding Sites List in 4uy0
Fluorine binding site 2 out of 4 in the Conserved Mechanisms of Microtubule-Stimulated Adp Release, Atp Binding, and Force Generation in Transport Kinesins


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Conserved Mechanisms of Microtubule-Stimulated Adp Release, Atp Binding, and Force Generation in Transport Kinesins within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F1341

b:35.1
occ:1.00
F2 C:ALF1341 0.0 35.1 1.0
AL C:ALF1341 1.8 35.1 1.0
F3 C:ALF1341 2.5 35.1 1.0
F4 C:ALF1341 2.6 35.1 1.0
O3B C:ADP1339 2.7 0.6 1.0
CA C:SER202 3.5 1.0 1.0
F1 C:ALF1341 3.6 35.1 1.0
PB C:ADP1339 4.0 0.6 1.0
O3A C:ADP1339 4.3 0.6 1.0
CA C:SER89 4.5 67.3 1.0
CA C:THR88 4.5 0.9 1.0
CA C:ASN199 4.6 0.7 1.0
MG C:MG1340 4.7 4.1 1.0
O2B C:ADP1339 4.7 0.6 1.0

Fluorine binding site 3 out of 4 in 4uy0

Go back to Fluorine Binding Sites List in 4uy0
Fluorine binding site 3 out of 4 in the Conserved Mechanisms of Microtubule-Stimulated Adp Release, Atp Binding, and Force Generation in Transport Kinesins


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Conserved Mechanisms of Microtubule-Stimulated Adp Release, Atp Binding, and Force Generation in Transport Kinesins within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F1341

b:35.1
occ:1.00
F3 C:ALF1341 0.0 35.1 1.0
AL C:ALF1341 1.8 35.1 1.0
F1 C:ALF1341 2.5 35.1 1.0
F2 C:ALF1341 2.5 35.1 1.0
O3B C:ADP1339 2.8 0.6 1.0
F4 C:ALF1341 3.6 35.1 1.0
CA C:GLY235 3.7 45.1 1.0
CA C:THR88 3.9 0.9 1.0
CA C:ALA234 4.3 50.6 1.0
PB C:ADP1339 4.3 0.6 1.0
O2B C:ADP1339 4.8 0.6 1.0

Fluorine binding site 4 out of 4 in 4uy0

Go back to Fluorine Binding Sites List in 4uy0
Fluorine binding site 4 out of 4 in the Conserved Mechanisms of Microtubule-Stimulated Adp Release, Atp Binding, and Force Generation in Transport Kinesins


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Conserved Mechanisms of Microtubule-Stimulated Adp Release, Atp Binding, and Force Generation in Transport Kinesins within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F1341

b:35.1
occ:1.00
F4 C:ALF1341 0.0 35.1 1.0
AL C:ALF1341 1.8 35.1 1.0
MG C:MG1340 2.2 4.1 1.0
F1 C:ALF1341 2.6 35.1 1.0
F2 C:ALF1341 2.6 35.1 1.0
O3B C:ADP1339 2.7 0.6 1.0
O2B C:ADP1339 3.0 0.6 1.0
PB C:ADP1339 3.2 0.6 1.0
O3A C:ADP1339 3.5 0.6 1.0
F3 C:ALF1341 3.6 35.1 1.0
CA C:SER202 3.7 1.0 1.0
CA C:SER203 3.7 0.4 1.0
O1A C:ADP1339 4.1 0.6 1.0
PA C:ADP1339 4.5 0.6 1.0
O1B C:ADP1339 4.6 0.6 1.0

Reference:

J.Atherton, I.Farabella, I.Yu, S.S.Rosenfeld, A.Houdusse, M.Topf, C.A.Moores. Conserved Mechanisms of Microtubule-Stimulated Adp Release, Atp Binding, and Force Generation in Transport Kinesins. Elife V. 3 3680 2014.
ISSN: ISSN 2050-084X
PubMed: 25209998
DOI: 10.7554/ELIFE.03680
Page generated: Sun Dec 13 12:13:45 2020

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