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Fluorine in PDB 6qdz: P38 Alpha Complex with AR117045

Enzymatic activity of P38 Alpha Complex with AR117045

All present enzymatic activity of P38 Alpha Complex with AR117045:
2.7.11.24;

Protein crystallography data

The structure of P38 Alpha Complex with AR117045, PDB code: 6qdz was solved by D.G.Brown, C.Hurley, S.L.Irving, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.90 / 1.73
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 65.351, 73.990, 77.671, 90.00, 90.00, 90.00
R / Rfree (%) 20.3 / 24.6

Fluorine Binding Sites:

The binding sites of Fluorine atom in the P38 Alpha Complex with AR117045 (pdb code 6qdz). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the P38 Alpha Complex with AR117045, PDB code: 6qdz:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 6qdz

Go back to Fluorine Binding Sites List in 6qdz
Fluorine binding site 1 out of 2 in the P38 Alpha Complex with AR117045


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of P38 Alpha Complex with AR117045 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F401

b:25.5
occ:1.00
F18 A:I46401 0.0 25.5 1.0
C10 A:I46401 1.3 22.6 1.0
C4 A:I46401 2.3 22.1 1.0
C3 A:I46401 2.3 22.7 1.0
CD1 A:ILE259 3.2 33.9 1.0
CG1 A:ILE259 3.5 33.5 1.0
C2 A:I46401 3.6 20.9 1.0
C1 A:I46401 3.6 21.5 1.0
CG2 A:ILE259 3.8 32.9 1.0
CG A:PRO242 3.9 22.8 1.0
CD1 A:LEU232 4.0 31.2 1.0
CD1 A:LEU236 4.1 25.4 1.0
C9 A:I46401 4.1 20.4 1.0
CD A:PRO242 4.3 23.6 1.0
CB A:ILE259 4.3 32.2 1.0
CD2 A:LEU236 4.4 24.1 1.0
CD2 A:LEU195 4.4 27.1 1.0
CD2 A:LEU232 4.4 32.3 1.0
CD1 A:LEU195 4.6 27.0 1.0
CG A:LEU232 4.7 31.5 1.0
CG A:LEU236 4.8 23.7 1.0
CG A:LEU195 5.0 26.9 1.0

Fluorine binding site 2 out of 2 in 6qdz

Go back to Fluorine Binding Sites List in 6qdz
Fluorine binding site 2 out of 2 in the P38 Alpha Complex with AR117045


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of P38 Alpha Complex with AR117045 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F401

b:21.9
occ:1.00
F19 A:I46401 0.0 21.9 1.0
C12 A:I46401 1.3 21.2 1.0
N16 A:I46401 2.2 20.6 1.0
C7 A:I46401 2.3 20.3 1.0
O A:HOH630 3.2 36.2 1.0
C6 A:I46401 3.4 19.1 1.0
CD2 A:LEU195 3.5 27.1 1.0
C11 A:I46401 3.6 19.6 1.0
CB A:TRP197 3.7 21.6 1.0
CG A:TRP197 3.7 20.2 1.0
CD1 A:TRP197 3.8 20.8 1.0
CG2 A:ILE250 3.8 17.8 1.0
C5 A:I46401 4.0 18.8 1.0
CG1 A:ILE250 4.3 18.4 1.0
O A:HOH643 4.4 53.6 1.0
CD2 A:TRP197 4.4 20.1 1.0
CB A:ILE250 4.5 18.3 1.0
CG A:LEU195 4.5 26.9 1.0
CA A:TRP197 4.5 22.7 1.0
NE1 A:TRP197 4.5 21.5 1.0
CA A:ILE250 4.6 19.2 1.0
CE2 A:TRP197 4.8 20.6 1.0
C14 A:I46401 4.8 20.3 1.0
CB A:LEU195 4.9 26.8 1.0
N A:TRP197 4.9 24.9 1.0

Reference:

D.G.Brown, S.L.Irving. P38 Alpha Complex with AR117045 To Be Published.
Page generated: Fri Aug 2 00:47:04 2024

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