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Fluorine in PDB, part 57 (files: 2241-2280), PDB 461d-4azy

Experimental structures of coordination spheres of Fluorine (F) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Fluorine atoms. PDB files: 2241-2280 (PDB 461d-4azy).
  1. 461d (F: 2) - A "Hydrat-Ion Spine" in A B-Dna Minor Groove
    Other atoms: Rb (1); Mg (2);
  2. 478d (F: 2) - Crystal Structure of the B-Dna Dodecamer 5'-D(Cgcgaa(Taf) Tcgcg), Where Taf Is 2'-Deoxy-2'-Fluoro-Arabino-Furanosyl Thymine
    Other atoms: Ca (3);
  3. 4a36 (F: 6) - Structure of Duck Rig-I Helicase Domain Bound to 19-Mer Dsrna and Atp Transition State Analogue
    Other atoms: Mg (2); Al (2);
  4. 4a3h (F: 1) - 2',4' Dinitrophenyl-2-Deoxy-2-Fluro-B-D-Cellobioside Complex of the Endoglucanase CEL5A From Bacillus Agaradhaerens at 1.6 A Resolution
  5. 4a4l (F: 3) - Crystal Structure of Polo-Like Kinase 1 in Complex with A 5-(2-Amino-Pyrimidin-4-Yl)-1H-Pyrrole Inhibitor
    Other atoms: Zn (1);
  6. 4a4o (F: 3) - Crystal Structure of Polo-Like Kinase 1 in Complex with A 2- (2-Amino-Pyrimidin-4-Yl)-1,5,6,7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
    Other atoms: Zn (1);
  7. 4a4x (F: 3) - NEK2-Ede Bound to CCT248662
  8. 4a6l (F: 4) - Beta-Tryptase Inhibitor
  9. 4a6v (F: 6) - X-Ray Structures of Oxazole Hydroxamate Ecmetap-Mn Complexes
    Other atoms: Mn (4);
  10. 4a7c (F: 3) - Crystal Structure of PIM1 Kinase with ETP46546
  11. 4a7s (F: 2) - Structure of Human I113T SOD1 Mutant Complexed with 5- Fluorouridine in the P21 Space Group
    Other atoms: Cu (4); Zn (2);
  12. 4a92 (F: 4) - Full-Length Hcv NS3-4A Protease-Helicase in Complex with A Macrocyclic Protease Inhibitor.
    Other atoms: Zn (2);
  13. 4a98 (F: 10) - X-Ray Structure of A Pentameric Ligand Gated Ion Channel From Erwinia Chrysanthemi (Elic) in Complex with Bromoflurazepam
    Other atoms: Br (10);
  14. 4aaa (F: 2) - Crystal Structure of the Human CDKL2 Kinase Domain
  15. 4acu (F: 3) - Aminoimidazoles As Bace-1 Inhibitors. X-Ray Crystal Structure of Beta Secretase Complexed with Compound 14
  16. 4acx (F: 4) - Aminoimidazoles As Bace-1 Inhibitors. X-Ray Crystal Structure of Beta Secretase Complexed with Compound 23
  17. 4afe (F: 3) - NEK2 Bound to Hybrid Compound 21
  18. 4agd (F: 1) - Crystal Structure of VEGFR2 (Juxtamembrane and Kinase Domains) in Complex with Sunitinib (SU11248) (N-2- Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1H-Indol-3- Ylidene)Methyl)-2,4-Dimethyl-1H-Pyrrole-3-Carboxamide)
  19. 4agw (F: 6) - Discovery of A Small Molecule Type II Inhibitor of Wild- Type and Gatekeeper Mutants of Bcr-Abl, Pdgfralpha, Kit, and Src Kinases
  20. 4ajm (F: 1) - Development of A Plate-Based Optical Biosensor Methodology to Identify PDE10 Fragment Inhibitors
    Other atoms: Mg (2); Zn (2);
  21. 4amw (F: 4) - Crystal Structure of the Gracilariopsis Lemaneiformis Alpha- 1,4-Glucan Lyase Covalent Intermediate Complex with 5- Fluoro-Idosyl-Fluoride
  22. 4amx (F: 4) - Crystal Structure of the Gracilariopsis Lemaneiformis Alpha-1,4-Glucan Lyase Covalent Intermediate Complex with 5-Fluoro-Glucosyl-Fluoride
  23. 4an2 (F: 3) - Crystal Structures of Human MEK1 with Carboxamide-Based Allosteric Inhibitor XL518 (Gdc-0973), or Related Analogs.
    Other atoms: Mg (1); I (1);
  24. 4an3 (F: 3) - Crystal Structures of Human MEK1 with Carboxamide-Based Allosteric Inhibitor XL518 (Gdc-0973), or Related Analogs.
    Other atoms: Mg (1); I (1);
  25. 4an9 (F: 3) - Crystal Structures of Human MEK1 with Carboxamide-Based Allosteric Inhibitor XL518 (Gdc-0973), or Related Analogs.
    Other atoms: Mg (1); I (1);
  26. 4anb (F: 3) - Crystal Structures of Human MEK1 with Carboxamide-Based Allosteric Inhibitor XL518 (Gdc-0973), or Related Analogs.
    Other atoms: Mg (1); I (1);
  27. 4anj (F: 4) - Myosin VI (MDINSERT2-Gfp Fusion) Pre-Powerstroke State (Mg.Adp.ALF4)
    Other atoms: Mg (1); Al (1); Ca (3);
  28. 4anq (F: 1) - Structure of G1269A Mutant Anaplastic Lymphoma Kinase in Complex with Crizotinib
    Other atoms: Cl (2);
  29. 4ans (F: 1) - Structure of L1196M,G1269A Double Mutant Anaplastic Lymphoma Kinase in Complex with Crizotinib
    Other atoms: Cl (2);
  30. 4anw (F: 4) - Complexes of PI3KGAMMA with Isoform Selective Inhibitors.
    Other atoms: Cl (2);
  31. 4aoj (F: 3) - Human Trka in Complex with the Inhibitor Az-23
    Other atoms: Cl (3); Zn (6);
  32. 4ap7 (F: 1) - Crystal Structure of C-Met Kinase Domain in Complex with 4-( (6-(4- Fluorophenyl)-(1,2,4)Triazolo(4,3-B)(1,2,4)Triazin-3-Yl)Methyl) Phenol
  33. 4ark (F: 2) - Crystal Structure of the Catalytic Domain of Human Map Kinase Kinase 1 (MEK1) in Complex with A Small Molecule Inhibitor and Adp
    Other atoms: Mg (1); I (1);
  34. 4asd (F: 3) - Crystal Structure of VEGFR2 (Juxtamembrane and Kinase Domains) in Complex with Sorafenib (Bay 43-9006)
    Other atoms: Cl (1);
  35. 4at4 (F: 4) - Crystal Structure of Trkb Kinase Domain in Complex with EX429
  36. 4aw1 (F: 3) - Human PDK1 Kinase Domain in Complex with Allosteric Compound PS210 Bound to the Pif-Pocket
    Other atoms: Mn (1); Cl (3); Na (2);
  37. 4axx (F: 3) - The Catalytically Active Fully Closed Conformation of Human Phosphoglycerate Kinase in Complex with Adp 3-Phosphoglycerate and Beryllium Trifluoride
    Other atoms: Mg (1); Cl (1);
  38. 4az0 (F: 1) - Crystal Structure of Cathepsin A, Complexed with 8A.
    Other atoms: Cd (6);
  39. 4az3 (F: 2) - Crystal Structure of Cathepsin A, Complexed with 15A
    Other atoms: Cd (4);
  40. 4azy (F: 5) - Design and Synthesis of BACE1 Inhibitors with in Vivo Brain Reduction of Beta-Amyloid Peptides (Compound 10)
    Other atoms: Na (1);
Page generated: Mon Jul 14 20:21:11 2025

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